RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 CCDC184Q52MB2 194 aa21.29■■□□□ 1
GPN1-212ENST00000616939 ANKRD30BQ9BXX2 1392 aa21.28■■□□□ 1
GPN1-212ENST00000616939 MPHOSPH9Q99550 1183 aa21.27■■□□□ 1
GPN1-212ENST00000616939 EPRSP07814 1512 aaKnown RBP21.27■■□□□ 1
GPN1-212ENST00000616939 WDR62O43379 1518 aa21.27■■□□□ 1
GPN1-212ENST00000616939 MRS2Q9HD23 443 aa21.27■□□□□ 0.99
GPN1-212ENST00000616939 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
GPN1-212ENST00000616939 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
GPN1-212ENST00000616939 RRP7BPQ9NSQ0 103 aa21.25■□□□□ 0.99
GPN1-212ENST00000616939 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
GPN1-212ENST00000616939 NOP58Q9Y2X3 529 aaKnown RBP21.22■□□□□ 0.99
GPN1-212ENST00000616939 MBD5Q9P267 1494 aa21.22■□□□□ 0.99
GPN1-212ENST00000616939 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
GPN1-212ENST00000616939 B4GALNT3Q6L9W6 998 aa21.21■□□□□ 0.99
GPN1-212ENST00000616939 KIF7Q2M1P5 1343 aa21.21■□□□□ 0.99
GPN1-212ENST00000616939 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
GPN1-212ENST00000616939 DAPK1P53355 1430 aa21.2■□□□□ 0.98
GPN1-212ENST00000616939 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
GPN1-212ENST00000616939 KIF14Q15058 1648 aa21.19■□□□□ 0.98
GPN1-212ENST00000616939 ADGBQ8N7X0 1667 aa21.18■□□□□ 0.98
GPN1-212ENST00000616939 DEKP35659 375 aaKnown RBP21.18■□□□□ 0.98
GPN1-212ENST00000616939 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
GPN1-212ENST00000616939 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
GPN1-212ENST00000616939 ARID4BQ4LE39 1312 aaPredicted RBP21.16■□□□□ 0.98
GPN1-212ENST00000616939 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
GPN1-212ENST00000616939 NUDCQ9Y266 331 aa21.16■□□□□ 0.98
GPN1-212ENST00000616939 BCORL1Q5H9F3 1711 aa21.14■□□□□ 0.97
GPN1-212ENST00000616939 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.97
GPN1-212ENST00000616939 CDK13Q14004 1512 aaKnown RBP21.14■□□□□ 0.97
GPN1-212ENST00000616939 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
GPN1-212ENST00000616939 KDM5CP41229 1560 aa21.13■□□□□ 0.97
GPN1-212ENST00000616939 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
GPN1-212ENST00000616939 ABCC5O15440 1437 aa21.12■□□□□ 0.97
GPN1-212ENST00000616939 PZPP20742 1482 aa21.09■□□□□ 0.97
GPN1-212ENST00000616939 CROCC2H7BZ55 1655 aa21.08■□□□□ 0.97
GPN1-212ENST00000616939 ROCK2O75116 1388 aaKnown RBP21.08■□□□□ 0.97
GPN1-212ENST00000616939 ITSN2Q9NZM3 1697 aa21.08■□□□□ 0.96
GPN1-212ENST00000616939 IPO9Q96P70 1041 aaKnown RBP21.06■□□□□ 0.96
GPN1-212ENST00000616939 ANP32AP39687 249 aaKnown RBP21.05■□□□□ 0.96
GPN1-212ENST00000616939 ADGRL2O95490 1459 aa21.05■□□□□ 0.96
GPN1-212ENST00000616939 E9PCH4 1651 aa21.04■□□□□ 0.96
GPN1-212ENST00000616939 UHRF1BP1Q6BDS2 1440 aa21.03■□□□□ 0.96
GPN1-212ENST00000616939 KTN1Q86UP2 1357 aaKnown RBP21.03■□□□□ 0.96
GPN1-212ENST00000616939 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
GPN1-212ENST00000616939 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
GPN1-212ENST00000616939 KIAA1107Q9UPP5 1409 aa21.02■□□□□ 0.95
GPN1-212ENST00000616939 PAK3O75914 559 aaPredicted RBP21.01■□□□□ 0.95
GPN1-212ENST00000616939 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
GPN1-212ENST00000616939 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
GPN1-212ENST00000616939 USP47Q96K76 1375 aa21.01■□□□□ 0.95
GPN1-212ENST00000616939 FOXD1Q16676 465 aa21.01■□□□□ 0.95
GPN1-212ENST00000616939 ADCY10Q96PN6 1610 aa21.01■□□□□ 0.95
GPN1-212ENST00000616939 KIAA0556O60303 1618 aa21■□□□□ 0.95
GPN1-212ENST00000616939 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
GPN1-212ENST00000616939 RAPGEF6Q8TEU7 1601 aa20.99■□□□□ 0.95
GPN1-212ENST00000616939 SLC4A1APQ9BWU0 796 aaKnown RBP20.98■□□□□ 0.95
GPN1-212ENST00000616939 PNISRQ8TF01 805 aaKnown RBP20.95■□□□□ 0.94
GPN1-212ENST00000616939 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
GPN1-212ENST00000616939 KIF15Q9NS87 1388 aa20.94■□□□□ 0.94
GPN1-212ENST00000616939 CAMSAP2Q08AD1 1489 aa20.94■□□□□ 0.94
GPN1-212ENST00000616939 NUP153P49790 1475 aaKnown RBP20.94■□□□□ 0.94
GPN1-212ENST00000616939 ZBTB47Q9UFB7 747 aaPredicted RBP20.93■□□□□ 0.94
GPN1-212ENST00000616939 KDM5DQ9BY66 1539 aa20.92■□□□□ 0.94
GPN1-212ENST00000616939 RTL5Q5HYW3 569 aaPredicted RBP20.92■□□□□ 0.94
GPN1-212ENST00000616939 DISP1Q96F81 1524 aa20.9■□□□□ 0.94
GPN1-212ENST00000616939 ZMYM4Q5VZL5 1548 aa20.89■□□□□ 0.94
GPN1-212ENST00000616939 TCERG1O14776 1098 aaKnown RBP20.89■□□□□ 0.93
GPN1-212ENST00000616939 NBR1Q14596 966 aa20.89■□□□□ 0.93
GPN1-212ENST00000616939 TROQ12816 1431 aaPredicted RBP20.88■□□□□ 0.93
GPN1-212ENST00000616939 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
GPN1-212ENST00000616939 INSRP06213 1382 aa20.87■□□□□ 0.93
GPN1-212ENST00000616939 SHANK2Q9UPX8 1470 aa20.86■□□□□ 0.93
GPN1-212ENST00000616939 CEP170Q5SW79 1584 aa20.86■□□□□ 0.93
GPN1-212ENST00000616939 RALBP1Q15311 655 aa20.86■□□□□ 0.93
GPN1-212ENST00000616939 MYBBP1AQ9BQG0 1328 aaKnown RBP20.85■□□□□ 0.93
GPN1-212ENST00000616939 MS4A1P11836 297 aa20.85■□□□□ 0.93
GPN1-212ENST00000616939 RRP1P56182 461 aaKnown RBP20.85■□□□□ 0.93
GPN1-212ENST00000616939 TMC1Q8TDI8 760 aa20.83■□□□□ 0.93
GPN1-212ENST00000616939 USP35Q9P2H5 1018 aa20.83■□□□□ 0.93
GPN1-212ENST00000616939 PDE3BQ13370 1112 aa20.83■□□□□ 0.92
GPN1-212ENST00000616939 GPATCH8Q9UKJ3 1502 aaKnown RBP20.82■□□□□ 0.92
GPN1-212ENST00000616939 ANKRD30AQ9BXX3 1397 aa20.81■□□□□ 0.92
GPN1-212ENST00000616939 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
GPN1-212ENST00000616939 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
GPN1-212ENST00000616939 LAMC1P11047 1609 aa20.79■□□□□ 0.92
GPN1-212ENST00000616939 ANKRD50Q9ULJ7 1429 aa20.77■□□□□ 0.91
GPN1-212ENST00000616939 TRPM1Q7Z4N2 1603 aa20.76■□□□□ 0.91
GPN1-212ENST00000616939 PKD2Q13563 968 aa20.76■□□□□ 0.91
GPN1-212ENST00000616939 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
GPN1-212ENST00000616939 PTPRGP23470 1445 aa20.75■□□□□ 0.91
GPN1-212ENST00000616939 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
GPN1-212ENST00000616939 RCAN3Q9UKA8 241 aa20.74■□□□□ 0.91
GPN1-212ENST00000616939 BACH2Q9BYV9 841 aa20.74■□□□□ 0.91
GPN1-212ENST00000616939 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
GPN1-212ENST00000616939 PDE4AP27815 886 aa20.73■□□□□ 0.91
GPN1-212ENST00000616939 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
GPN1-212ENST00000616939 PPM1GO15355 546 aaPredicted RBP20.72■□□□□ 0.91
GPN1-212ENST00000616939 BLMP54132 1417 aaPredicted RBP20.72■□□□□ 0.91
GPN1-212ENST00000616939 EXOC6Q8TAG9 804 aa20.71■□□□□ 0.91
GPN1-212ENST00000616939 CFDP1Q9UEE9 299 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms