RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 KDM6BO15054 1643 aa22.48■■□□□ 1.19
SEMA3B-212ENST00000616701 DAPK1P53355 1430 aa22.46■■□□□ 1.19
SEMA3B-212ENST00000616701 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
SEMA3B-212ENST00000616701 ABCC5O15440 1437 aa22.46■■□□□ 1.19
SEMA3B-212ENST00000616701 GPATCH8Q9UKJ3 1502 aaKnown RBP22.44■■□□□ 1.18
SEMA3B-212ENST00000616701 CENPBP07199 599 aaPredicted RBP22.42■■□□□ 1.18
SEMA3B-212ENST00000616701 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
SEMA3B-212ENST00000616701 FOXD1Q16676 465 aa22.41■■□□□ 1.18
SEMA3B-212ENST00000616701 GCC2Q8IWJ2 1684 aa22.4■■□□□ 1.18
SEMA3B-212ENST00000616701 DNMT1P26358 1616 aaKnown RBP22.38■■□□□ 1.17
SEMA3B-212ENST00000616701 YTHDC1Q96MU7 727 aaKnown RBP22.37■■□□□ 1.17
SEMA3B-212ENST00000616701 HIRIP3Q9BW71 556 aaPredicted RBP22.37■■□□□ 1.17
SEMA3B-212ENST00000616701 TONSLQ96HA7 1378 aa22.37■■□□□ 1.17
SEMA3B-212ENST00000616701 ADCY10Q96PN6 1610 aa22.36■■□□□ 1.17
SEMA3B-212ENST00000616701 PPP1R15AO75807 674 aaPredicted RBP22.35■■□□□ 1.17
SEMA3B-212ENST00000616701 ITSN2Q9NZM3 1697 aa22.34■■□□□ 1.17
SEMA3B-212ENST00000616701 MPHOSPH9Q99550 1183 aa22.34■■□□□ 1.17
SEMA3B-212ENST00000616701 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
SEMA3B-212ENST00000616701 AKNAQ7Z591 1439 aa22.34■■□□□ 1.17
SEMA3B-212ENST00000616701 DENND4BO75064 1496 aaPredicted RBP22.32■■□□□ 1.16
SEMA3B-212ENST00000616701 ABCC10Q5T3U5 1492 aa22.32■■□□□ 1.16
SEMA3B-212ENST00000616701 CDC42BPAQ5VT25 1732 aa22.3■■□□□ 1.16
SEMA3B-212ENST00000616701 ROCK1Q13464 1354 aa22.3■■□□□ 1.16
SEMA3B-212ENST00000616701 KCNH8Q96L42 1107 aa22.29■■□□□ 1.16
SEMA3B-212ENST00000616701 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.16
SEMA3B-212ENST00000616701 TIMELESSQ9UNS1 1208 aa22.29■■□□□ 1.16
SEMA3B-212ENST00000616701 ERICH6Q7L0X2 663 aa22.29■■□□□ 1.16
SEMA3B-212ENST00000616701 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-212ENST00000616701 NCOA1Q15788 1441 aa22.24■■□□□ 1.15
SEMA3B-212ENST00000616701 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
SEMA3B-212ENST00000616701 ABCC2Q92887 1545 aa22.2■■□□□ 1.15
SEMA3B-212ENST00000616701 TSPY4P0CV99 314 aa22.19■■□□□ 1.14
SEMA3B-212ENST00000616701 TSPY10P0CW01 314 aa22.19■■□□□ 1.14
SEMA3B-212ENST00000616701 ANKRD30AQ9BXX3 1397 aa22.19■■□□□ 1.14
SEMA3B-212ENST00000616701 DDX10Q13206 875 aaKnown RBP22.17■■□□□ 1.14
SEMA3B-212ENST00000616701 C9orf84Q5VXU9 1444 aa22.17■■□□□ 1.14
SEMA3B-212ENST00000616701 CROCC2H7BZ55 1655 aa22.17■■□□□ 1.14
SEMA3B-212ENST00000616701 ADGBQ8N7X0 1667 aa22.16■■□□□ 1.14
SEMA3B-212ENST00000616701 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
SEMA3B-212ENST00000616701 CDC42BPBQ9Y5S2 1711 aa22.14■■□□□ 1.14
SEMA3B-212ENST00000616701 L3MBTL2Q969R5 705 aa22.13■■□□□ 1.13
SEMA3B-212ENST00000616701 ADGRL2O95490 1459 aa22.13■■□□□ 1.13
SEMA3B-212ENST00000616701 KDM5BQ9UGL1 1544 aa22.13■■□□□ 1.13
SEMA3B-212ENST00000616701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.13■■□□□ 1.13
SEMA3B-212ENST00000616701 ANKRD50Q9ULJ7 1429 aa22.13■■□□□ 1.13
SEMA3B-212ENST00000616701 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
SEMA3B-212ENST00000616701 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
SEMA3B-212ENST00000616701 ARHGAP5Q13017 1502 aa22.12■■□□□ 1.13
SEMA3B-212ENST00000616701 PZPP20742 1482 aa22.11■■□□□ 1.13
SEMA3B-212ENST00000616701 MBD5Q9P267 1494 aa22.1■■□□□ 1.13
SEMA3B-212ENST00000616701 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
SEMA3B-212ENST00000616701 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
SEMA3B-212ENST00000616701 PKD2Q13563 968 aa22.09■■□□□ 1.13
SEMA3B-212ENST00000616701 KIF15Q9NS87 1388 aa22.08■■□□□ 1.12
SEMA3B-212ENST00000616701 SYCP2Q9BX26 1530 aa22.07■■□□□ 1.12
SEMA3B-212ENST00000616701 NUP155O75694 1391 aa22.06■■□□□ 1.12
SEMA3B-212ENST00000616701 SHANK2Q9UPX8 1470 aa22.05■■□□□ 1.12
SEMA3B-212ENST00000616701 CCDC141Q6ZP82 1450 aa22.04■■□□□ 1.12
SEMA3B-212ENST00000616701 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
SEMA3B-212ENST00000616701 RPRD2Q5VT52 1461 aaKnown RBP22.01■■□□□ 1.11
SEMA3B-212ENST00000616701 UHRF1BP1LA0JNW5 1464 aa22.01■■□□□ 1.11
SEMA3B-212ENST00000616701 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
SEMA3B-212ENST00000616701 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
SEMA3B-212ENST00000616701 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
SEMA3B-212ENST00000616701 HSPA5P11021 654 aaKnown RBP21.98■■□□□ 1.11
SEMA3B-212ENST00000616701 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
SEMA3B-212ENST00000616701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.98■■□□□ 1.112e-7■■□□□ 14.1
SEMA3B-212ENST00000616701 ZNF326Q5BKZ1 582 aaKnown RBP21.97■■□□□ 1.11
SEMA3B-212ENST00000616701 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
SEMA3B-212ENST00000616701 RSPH4AQ5TD94 716 aa21.96■■□□□ 1.11
SEMA3B-212ENST00000616701 EFCAB2Q5VUJ9 269 aa21.95■■□□□ 1.1
SEMA3B-212ENST00000616701 ANP32EQ9BTT0 268 aa21.95■■□□□ 1.1
SEMA3B-212ENST00000616701 PLCH2O75038 1416 aa21.95■■□□□ 1.1
SEMA3B-212ENST00000616701 TEX14Q8IWB6 1497 aa21.94■■□□□ 1.1
SEMA3B-212ENST00000616701 EIF4G2P78344 907 aaKnown RBP eCLIP21.9■■□□□ 1.1
SEMA3B-212ENST00000616701 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.09
SEMA3B-212ENST00000616701 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
SEMA3B-212ENST00000616701 SLC24A1O60721 1099 aa21.87■■□□□ 1.09
SEMA3B-212ENST00000616701 PLEKHH2Q8IVE3 1493 aa21.86■■□□□ 1.09
SEMA3B-212ENST00000616701 WDR7Q9Y4E6 1490 aa21.86■■□□□ 1.09
SEMA3B-212ENST00000616701 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
SEMA3B-212ENST00000616701 WASHC2AQ641Q2 1341 aa21.84■■□□□ 1.09
SEMA3B-212ENST00000616701 C11orf95C9JLR9 678 aaPredicted RBP21.83■■□□□ 1.08
SEMA3B-212ENST00000616701 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.08
SEMA3B-212ENST00000616701 FAM135AQ9P2D6 1515 aa21.82■■□□□ 1.08
SEMA3B-212ENST00000616701 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
SEMA3B-212ENST00000616701 ANP32CO43423 234 aa21.82■■□□□ 1.08
SEMA3B-212ENST00000616701 ABCC1P33527 1531 aa21.82■■□□□ 1.08
SEMA3B-212ENST00000616701 KDM5DQ9BY66 1539 aa21.81■■□□□ 1.08
SEMA3B-212ENST00000616701 MAST1Q9Y2H9 1570 aa21.81■■□□□ 1.08
SEMA3B-212ENST00000616701 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
SEMA3B-212ENST00000616701 NPM1P06748 294 aaKnown RBP eCLIP21.8■■□□□ 1.08
SEMA3B-212ENST00000616701 RGL3Q3MIN7 710 aa21.77■■□□□ 1.08
SEMA3B-212ENST00000616701 DCAF11Q8TEB1 546 aa21.76■■□□□ 1.07
SEMA3B-212ENST00000616701 FANCAO15360 1455 aa21.76■■□□□ 1.07
SEMA3B-212ENST00000616701 PLXNC1O60486 1568 aa21.75■■□□□ 1.07
SEMA3B-212ENST00000616701 DUOX2Q9NRD8 1548 aa21.74■■□□□ 1.07
SEMA3B-212ENST00000616701 POLR3GLQ9BT43 218 aa21.73■■□□□ 1.07
SEMA3B-212ENST00000616701 UNC13BO14795 1591 aa21.71■■□□□ 1.07
SEMA3B-212ENST00000616701 SCAPERQ9BY12 1400 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms