RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
NEAT1-205ENST00000616315 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
NEAT1-205ENST00000616315 BCL11BQ9C0K0 894 aaPredicted RBP11.85□□□□□ -0.51
NEAT1-205ENST00000616315 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
NEAT1-205ENST00000616315 NLRP6P59044 892 aa11.82□□□□□ -0.52
NEAT1-205ENST00000616315 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
NEAT1-205ENST00000616315 MFRPQ9BY79 579 aa11.8□□□□□ -0.52
NEAT1-205ENST00000616315 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
NEAT1-205ENST00000616315 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
NEAT1-205ENST00000616315 KHSRPQ92945 711 aaKnown RBP eCLIP11.78□□□□□ -0.521e-323■■□□□ 11.9
NEAT1-205ENST00000616315 STK25O00506 426 aa11.74□□□□□ -0.53
NEAT1-205ENST00000616315 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
NEAT1-205ENST00000616315 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
NEAT1-205ENST00000616315 KIF3CO14782 793 aa11.72□□□□□ -0.53
NEAT1-205ENST00000616315 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
NEAT1-205ENST00000616315 C2orf72A6NCS6 295 aa11.7□□□□□ -0.54
NEAT1-205ENST00000616315 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
NEAT1-205ENST00000616315 RGL2O15211 777 aa11.69□□□□□ -0.54
NEAT1-205ENST00000616315 PKD2Q13563 968 aa11.69□□□□□ -0.54
NEAT1-205ENST00000616315 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
NEAT1-205ENST00000616315 NUDT7P0C024 238 aa11.63□□□□□ -0.55
NEAT1-205ENST00000616315 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
NEAT1-205ENST00000616315 PPP1R37O75864 691 aa11.61□□□□□ -0.55
NEAT1-205ENST00000616315 PCDHGA4Q9Y5G9 962 aa11.59□□□□□ -0.55
NEAT1-205ENST00000616315 SLC34A2O95436 690 aa11.58□□□□□ -0.56
NEAT1-205ENST00000616315 LSM11P83369 360 aaKnown RBP eCLIP11.58□□□□□ -0.563e-69■□□□□ 10.6
NEAT1-205ENST00000616315 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
NEAT1-205ENST00000616315 LHX6Q9UPM6 363 aa11.58□□□□□ -0.56
NEAT1-205ENST00000616315 PTGER2P43116 358 aa11.56□□□□□ -0.56
NEAT1-205ENST00000616315 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
NEAT1-205ENST00000616315 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
NEAT1-205ENST00000616315 PBX2P40425 430 aa11.5□□□□□ -0.57
NEAT1-205ENST00000616315 KDM4FA0A1W2PPD8 638 aa11.47□□□□□ -0.57
NEAT1-205ENST00000616315 PTCD2Q8WV60 388 aaKnown RBP11.43□□□□□ -0.58
NEAT1-205ENST00000616315 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
NEAT1-205ENST00000616315 ARHGAP33O14559 1287 aa11.4□□□□□ -0.58
NEAT1-205ENST00000616315 FOXK1P85037 733 aa11.4□□□□□ -0.58
NEAT1-205ENST00000616315 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
NEAT1-205ENST00000616315 ADGRD1Q6QNK2 874 aa11.39□□□□□ -0.59
NEAT1-205ENST00000616315 GPHNQ9NQX3 736 aaPredicted RBP11.39□□□□□ -0.59
NEAT1-205ENST00000616315 DSG2Q14126 1118 aa11.38□□□□□ -0.59
NEAT1-205ENST00000616315 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
NEAT1-205ENST00000616315 PSEN2P49810 448 aa11.37□□□□□ -0.59
NEAT1-205ENST00000616315 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
NEAT1-205ENST00000616315 HRO43593 1189 aa11.32□□□□□ -0.6
NEAT1-205ENST00000616315 CHGAP10645 457 aaKnown RBP11.32□□□□□ -0.6
NEAT1-205ENST00000616315 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
NEAT1-205ENST00000616315 TK2O00142 265 aa11.31□□□□□ -0.6
NEAT1-205ENST00000616315 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
NEAT1-205ENST00000616315 PLA2G2EQ9NZK7 142 aa11.29□□□□□ -0.6
NEAT1-205ENST00000616315 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
NEAT1-205ENST00000616315 TBC1D12O60347 775 aa11.27□□□□□ -0.61
NEAT1-205ENST00000616315 OXER1Q8TDS5 423 aa11.26□□□□□ -0.61
NEAT1-205ENST00000616315 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
NEAT1-205ENST00000616315 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
NEAT1-205ENST00000616315 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
NEAT1-205ENST00000616315 CRISPLD2Q9H0B8 497 aa11.23□□□□□ -0.61
NEAT1-205ENST00000616315 KCTD12Q96CX2 325 aaKnown RBP11.22□□□□□ -0.61
NEAT1-205ENST00000616315 NCKAP5LQ9HCH0 1330 aa11.18□□□□□ -0.62
NEAT1-205ENST00000616315 PPP1R15BQ5SWA1 713 aa11.18□□□□□ -0.62
NEAT1-205ENST00000616315 ZNF454Q8N9F8 522 aa11.18□□□□□ -0.62
NEAT1-205ENST00000616315 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
NEAT1-205ENST00000616315 FOSBP53539 338 aa11.14□□□□□ -0.63
NEAT1-205ENST00000616315 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
NEAT1-205ENST00000616315 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
NEAT1-205ENST00000616315 KCNH8Q96L42 1107 aa11.13□□□□□ -0.63
NEAT1-205ENST00000616315 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
NEAT1-205ENST00000616315 RYDENQ9NUL5 291 aaKnown RBP11.12□□□□□ -0.63
NEAT1-205ENST00000616315 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
NEAT1-205ENST00000616315 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
NEAT1-205ENST00000616315 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
NEAT1-205ENST00000616315 PDE4AP27815 886 aa11.1□□□□□ -0.63
NEAT1-205ENST00000616315 PTPN5P54829 565 aa11.1□□□□□ -0.63
NEAT1-205ENST00000616315 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
NEAT1-205ENST00000616315 EVI5O60447 810 aa11.08□□□□□ -0.64
NEAT1-205ENST00000616315 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
NEAT1-205ENST00000616315 PTPREP23469 700 aa11.07□□□□□ -0.64
NEAT1-205ENST00000616315 JPH4Q96JJ6 628 aa11.06□□□□□ -0.64
NEAT1-205ENST00000616315 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
NEAT1-205ENST00000616315 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
NEAT1-205ENST00000616315 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
NEAT1-205ENST00000616315 THSD4Q6ZMP0 1018 aa11.04□□□□□ -0.64
NEAT1-205ENST00000616315 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
NEAT1-205ENST00000616315 DDX27Q96GQ7 796 aaKnown RBP11.03□□□□□ -0.64
NEAT1-205ENST00000616315 MFSD10Q14728 455 aa11.02□□□□□ -0.65
NEAT1-205ENST00000616315 EMILIN3Q9NT22 766 aa11.02□□□□□ -0.65
NEAT1-205ENST00000616315 MAP3K9P80192 1104 aa10.99□□□□□ -0.65
NEAT1-205ENST00000616315 MRPL50Q8N5N7 158 aaKnown RBP10.99□□□□□ -0.65
NEAT1-205ENST00000616315 WNT2BQ93097 391 aa10.99□□□□□ -0.65
NEAT1-205ENST00000616315 GOLGA8CPA6NN73 597 aa10.97□□□□□ -0.65
NEAT1-205ENST00000616315 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
NEAT1-205ENST00000616315 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
NEAT1-205ENST00000616315 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
NEAT1-205ENST00000616315 COL9A1P20849 921 aa10.94□□□□□ -0.66
NEAT1-205ENST00000616315 PROX2Q3B8N5 592 aa10.94□□□□□ -0.66
NEAT1-205ENST00000616315 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
NEAT1-205ENST00000616315 PPP1R3GB7ZBB8 358 aa10.91□□□□□ -0.66
NEAT1-205ENST00000616315 A0A0G2JS52 829 aa10.9□□□□□ -0.66
NEAT1-205ENST00000616315 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
NEAT1-205ENST00000616315 RGS20O76081 388 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms