RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 KIF7Q2M1P5 1343 aa7.49□□□□□ -1.21
SYNCRIP-204ENST00000616122 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
SYNCRIP-204ENST00000616122 CANXP27824 592 aaKnown RBP7.49□□□□□ -1.21
SYNCRIP-204ENST00000616122 PTPRGP23470 1445 aa7.48□□□□□ -1.21
SYNCRIP-204ENST00000616122 FYCO1Q9BQS8 1478 aa7.48□□□□□ -1.21
SYNCRIP-204ENST00000616122 TMF1P82094 1093 aa7.47□□□□□ -1.21
SYNCRIP-204ENST00000616122 CC2D1BQ5T0F9 858 aaKnown RBP7.47□□□□□ -1.21
SYNCRIP-204ENST00000616122 CCDC7Q96M83 1385 aa7.47□□□□□ -1.21
SYNCRIP-204ENST00000616122 TIAM1Q13009 1591 aa7.47□□□□□ -1.21
SYNCRIP-204ENST00000616122 CCDC184Q52MB2 194 aa7.47□□□□□ -1.21
SYNCRIP-204ENST00000616122 ZBTB47Q9UFB7 747 aaPredicted RBP7.47□□□□□ -1.21
SYNCRIP-204ENST00000616122 USP47Q96K76 1375 aa7.46□□□□□ -1.22
SYNCRIP-204ENST00000616122 ANKRD50Q9ULJ7 1429 aa7.46□□□□□ -1.22
SYNCRIP-204ENST00000616122 MAP3K1Q13233 1512 aa7.46□□□□□ -1.22
SYNCRIP-204ENST00000616122 RALBP1Q15311 655 aa7.45□□□□□ -1.22
SYNCRIP-204ENST00000616122 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.45□□□□□ -1.22
SYNCRIP-204ENST00000616122 ZBED9Q6R2W3 1325 aa7.45□□□□□ -1.22
SYNCRIP-204ENST00000616122 C11orf95C9JLR9 678 aaPredicted RBP7.45□□□□□ -1.22
SYNCRIP-204ENST00000616122 MIA2Q96PC5 1412 aa7.45□□□□□ -1.22
SYNCRIP-204ENST00000616122 NUDCQ9Y266 331 aa7.45□□□□□ -1.22
SYNCRIP-204ENST00000616122 GRIN2BQ13224 1484 aa7.45□□□□□ -1.22
SYNCRIP-204ENST00000616122 KIF3BO15066 747 aa7.44□□□□□ -1.22
SYNCRIP-204ENST00000616122 SENP3Q9H4L4 574 aaPredicted RBP7.44□□□□□ -1.22
SYNCRIP-204ENST00000616122 NEUROD2Q15784 382 aa7.44□□□□□ -1.22
SYNCRIP-204ENST00000616122 KIF15Q9NS87 1388 aa7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 PTPRKQ15262 1439 aa7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 ROCK2O75116 1388 aaKnown RBP7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 NEFMP07197 916 aa7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 STAG3Q9UJ98 1225 aa7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 EFCAB5A4FU69 1503 aa7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 GGT6Q6P531 493 aa7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 PRG4Q92954 1404 aaPredicted RBP7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 SPAG9O60271 1321 aaKnown RBP7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
SYNCRIP-204ENST00000616122 RCAN3Q9UKA8 241 aa7.42□□□□□ -1.22
SYNCRIP-204ENST00000616122 NBR1Q14596 966 aa7.42□□□□□ -1.22
SYNCRIP-204ENST00000616122 KTN1Q86UP2 1357 aaKnown RBP7.42□□□□□ -1.22
SYNCRIP-204ENST00000616122 TROQ12816 1431 aaPredicted RBP7.42□□□□□ -1.22
SYNCRIP-204ENST00000616122 WDR97A6NE52 1622 aa7.42□□□□□ -1.22
SYNCRIP-204ENST00000616122 ANKRD30BQ9BXX2 1392 aa7.41□□□□□ -1.22
SYNCRIP-204ENST00000616122 AFAP1Q8N556 730 aa7.41□□□□□ -1.22
SYNCRIP-204ENST00000616122 CCDC144AA2RUR9 1427 aa7.41□□□□□ -1.22
SYNCRIP-204ENST00000616122 TNNT2P45379 298 aaPredicted RBP7.41□□□□□ -1.22
SYNCRIP-204ENST00000616122 CC2D2AQ9P2K1 1620 aa7.41□□□□□ -1.22
SYNCRIP-204ENST00000616122 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
SYNCRIP-204ENST00000616122 PDE3BQ13370 1112 aa7.4□□□□□ -1.22
SYNCRIP-204ENST00000616122 PANK3Q9H999 370 aa7.4□□□□□ -1.22
SYNCRIP-204ENST00000616122 KIAA0586Q9BVV6 1533 aa7.4□□□□□ -1.22
SYNCRIP-204ENST00000616122 DNMBPQ6XZF7 1577 aa7.4□□□□□ -1.22
SYNCRIP-204ENST00000616122 PNISRQ8TF01 805 aaKnown RBP7.4□□□□□ -1.23
SYNCRIP-204ENST00000616122 ESF1Q9H501 851 aaKnown RBP7.39□□□□□ -1.23
SYNCRIP-204ENST00000616122 EPRSP07814 1512 aaKnown RBP7.39□□□□□ -1.23
SYNCRIP-204ENST00000616122 MYBBP1AQ9BQG0 1328 aaKnown RBP7.39□□□□□ -1.23
SYNCRIP-204ENST00000616122 URB2Q14146 1524 aaKnown RBP7.39□□□□□ -1.23
SYNCRIP-204ENST00000616122 BCL11AQ9H165 835 aa7.39□□□□□ -1.23
SYNCRIP-204ENST00000616122 CNTLNQ9NXG0 1405 aa7.39□□□□□ -1.23
SYNCRIP-204ENST00000616122 ARID4BQ4LE39 1312 aaPredicted RBP7.39□□□□□ -1.23
SYNCRIP-204ENST00000616122 RGS3P49796 1198 aa7.38□□□□□ -1.23
SYNCRIP-204ENST00000616122 CFAP53Q96M91 514 aa7.38□□□□□ -1.23
SYNCRIP-204ENST00000616122 NCOA1Q15788 1441 aa7.38□□□□□ -1.23
SYNCRIP-204ENST00000616122 MAPKBP1O60336 1514 aa7.37□□□□□ -1.23
SYNCRIP-204ENST00000616122 ROCK1Q13464 1354 aa7.37□□□□□ -1.23
SYNCRIP-204ENST00000616122 FRAT1Q92837 279 aaPredicted RBP7.36□□□□□ -1.23
SYNCRIP-204ENST00000616122 KIAA1107Q9UPP5 1409 aa7.36□□□□□ -1.23
SYNCRIP-204ENST00000616122 SAFB2Q14151 953 aaKnown RBP eCLIP7.36□□□□□ -1.23
SYNCRIP-204ENST00000616122 KANK1Q14678 1352 aa7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 BIVM-ERCC5R4GMW8 1640 aa7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 ABCC5O15440 1437 aa7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 NOP58Q9Y2X3 529 aaKnown RBP7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 GOLGA2Q08379 1002 aa7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 UPF2Q9HAU5 1272 aaKnown RBP7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 MORC1Q86VD1 984 aa7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 CDK13Q14004 1512 aaKnown RBP7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 EXOC6Q8TAG9 804 aa7.35□□□□□ -1.23
SYNCRIP-204ENST00000616122 ZNF608Q9ULD9 1512 aaPredicted RBP7.34□□□□□ -1.23
SYNCRIP-204ENST00000616122 DAPK1P53355 1430 aa7.34□□□□□ -1.23
SYNCRIP-204ENST00000616122 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
SYNCRIP-204ENST00000616122 PCF11O94913 1555 aaKnown RBP7.34□□□□□ -1.23
SYNCRIP-204ENST00000616122 PLB1Q6P1J6 1458 aa7.34□□□□□ -1.23
SYNCRIP-204ENST00000616122 TCERG1O14776 1098 aaKnown RBP7.34□□□□□ -1.23
SYNCRIP-204ENST00000616122 STAC3Q96MF2 364 aa7.34□□□□□ -1.24
SYNCRIP-204ENST00000616122 POGKQ9P215 609 aa7.34□□□□□ -1.24
SYNCRIP-204ENST00000616122 AKNAQ7Z591 1439 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 PPM1GO15355 546 aaPredicted RBP7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 TRAK1Q9UPV9 953 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 MRC2Q9UBG0 1479 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 PLIN1O60240 522 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 CDCA7LQ96GN5 454 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 APAF1O14727 1248 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 EHBP1L1Q8N3D4 1523 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 WASHC2CQ9Y4E1 1318 aa7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 U2SURPO15042 1029 aaKnown RBP7.33□□□□□ -1.24
SYNCRIP-204ENST00000616122 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
SYNCRIP-204ENST00000616122 U2AF1L5P0DN76 240 aaPredicted RBP7.32□□□□□ -1.24
SYNCRIP-204ENST00000616122 U2AF1Q01081 240 aaKnown RBP eCLIP7.32□□□□□ -1.244e-9■□□□□ 11
SYNCRIP-204ENST00000616122 RRP1P56182 461 aaKnown RBP7.32□□□□□ -1.24
SYNCRIP-204ENST00000616122 FANCIQ9NVI1 1328 aa7.32□□□□□ -1.24
SYNCRIP-204ENST00000616122 C9orf84Q5VXU9 1444 aa7.32□□□□□ -1.24
SYNCRIP-204ENST00000616122 RPRD2Q5VT52 1461 aaKnown RBP7.32□□□□□ -1.24
SYNCRIP-204ENST00000616122 SRPK2P78362 688 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms