RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
VPS11-206ENST00000614944 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
VPS11-206ENST00000614944 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
VPS11-206ENST00000614944 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
VPS11-206ENST00000614944 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
VPS11-206ENST00000614944 DNMT1P26358 1616 aaKnown RBP12.97□□□□□ -0.33
VPS11-206ENST00000614944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS11-206ENST00000614944 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
VPS11-206ENST00000614944 WDR7Q9Y4E6 1490 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 ARHGEF5Q12774 1597 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
VPS11-206ENST00000614944 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
VPS11-206ENST00000614944 GCC2Q8IWJ2 1684 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 GLI2P10070 1586 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
VPS11-206ENST00000614944 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
VPS11-206ENST00000614944 MAST1Q9Y2H9 1570 aa12.92□□□□□ -0.34
VPS11-206ENST00000614944 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
VPS11-206ENST00000614944 ROCK1Q13464 1354 aa12.9□□□□□ -0.34
VPS11-206ENST00000614944 ADGRL2O95490 1459 aa12.9□□□□□ -0.35
VPS11-206ENST00000614944 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
VPS11-206ENST00000614944 PLCH2O75038 1416 aa12.89□□□□□ -0.35
VPS11-206ENST00000614944 SAMD9LQ8IVG5 1584 aa12.88□□□□□ -0.35
VPS11-206ENST00000614944 ASXL2Q76L83 1435 aa12.88□□□□□ -0.35
VPS11-206ENST00000614944 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
VPS11-206ENST00000614944 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
VPS11-206ENST00000614944 DAPK1P53355 1430 aa12.86□□□□□ -0.35
VPS11-206ENST00000614944 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
VPS11-206ENST00000614944 ABCC1P33527 1531 aa12.85□□□□□ -0.35
VPS11-206ENST00000614944 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
VPS11-206ENST00000614944 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
VPS11-206ENST00000614944 PLXNC1O60486 1568 aa12.83□□□□□ -0.36
VPS11-206ENST00000614944 ABCC5O15440 1437 aa12.83□□□□□ -0.36
VPS11-206ENST00000614944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
VPS11-206ENST00000614944 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
VPS11-206ENST00000614944 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
VPS11-206ENST00000614944 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
VPS11-206ENST00000614944 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
VPS11-206ENST00000614944 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
VPS11-206ENST00000614944 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
VPS11-206ENST00000614944 DIP2BQ9P265 1576 aa12.8□□□□□ -0.36
VPS11-206ENST00000614944 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
VPS11-206ENST00000614944 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
VPS11-206ENST00000614944 NAIPQ13075 1403 aa12.79□□□□□ -0.36
VPS11-206ENST00000614944 NEO1Q92859 1461 aa12.78□□□□□ -0.36
VPS11-206ENST00000614944 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.36
VPS11-206ENST00000614944 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
VPS11-206ENST00000614944 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
VPS11-206ENST00000614944 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
VPS11-206ENST00000614944 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
VPS11-206ENST00000614944 PKNOX2Q96KN3 472 aa12.75□□□□□ -0.37
VPS11-206ENST00000614944 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 KDM5CP41229 1560 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 FANCAO15360 1455 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 EFCAB2Q5VUJ9 269 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 PPRC1Q5VV67 1664 aaKnown RBP12.73□□□□□ -0.37
VPS11-206ENST00000614944 BCORL1Q5H9F3 1711 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
VPS11-206ENST00000614944 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
VPS11-206ENST00000614944 EIF2AK4Q9P2K8 1649 aaKnown RBP12.72□□□□□ -0.37
VPS11-206ENST00000614944 CD109Q6YHK3 1445 aa12.71□□□□□ -0.37
VPS11-206ENST00000614944 ZFYVE16Q7Z3T8 1539 aa12.71□□□□□ -0.38
VPS11-206ENST00000614944 UNC13BO14795 1591 aa12.7□□□□□ -0.38
VPS11-206ENST00000614944 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
VPS11-206ENST00000614944 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
VPS11-206ENST00000614944 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
VPS11-206ENST00000614944 TEX14Q8IWB6 1497 aa12.69□□□□□ -0.38
VPS11-206ENST00000614944 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 DEPDC5O75140 1603 aa12.67□□□□□ -0.38
VPS11-206ENST00000614944 MLH3Q9UHC1 1453 aa12.67□□□□□ -0.38
VPS11-206ENST00000614944 KDM6BO15054 1643 aa12.67□□□□□ -0.38
VPS11-206ENST00000614944 CYB5RLQ6IPT4 315 aa12.66□□□□□ -0.38
VPS11-206ENST00000614944 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
VPS11-206ENST00000614944 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
VPS11-206ENST00000614944 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
VPS11-206ENST00000614944 KIDINS220Q9ULH0 1771 aa12.65□□□□□ -0.39
VPS11-206ENST00000614944 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
VPS11-206ENST00000614944 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
VPS11-206ENST00000614944 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
VPS11-206ENST00000614944 TRAPPC8Q9Y2L5 1435 aa12.64□□□□□ -0.39
VPS11-206ENST00000614944 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
VPS11-206ENST00000614944 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
VPS11-206ENST00000614944 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
VPS11-206ENST00000614944 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
VPS11-206ENST00000614944 FRMPD1Q5SYB0 1578 aa12.62□□□□□ -0.39
VPS11-206ENST00000614944 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
VPS11-206ENST00000614944 SCAPERQ9BY12 1400 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms