RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
SNX9-202ENST00000614703 ATP10AO60312 1499 aa16.22■□□□□ 0.19
SNX9-202ENST00000614703 EEA1Q15075 1411 aa16.21■□□□□ 0.19
SNX9-202ENST00000614703 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
SNX9-202ENST00000614703 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.19
SNX9-202ENST00000614703 SIGLEC1Q9BZZ2 1709 aa16.21■□□□□ 0.19
SNX9-202ENST00000614703 PLCH2O75038 1416 aa16.2■□□□□ 0.18
SNX9-202ENST00000614703 C9orf84Q5VXU9 1444 aa16.2■□□□□ 0.18
SNX9-202ENST00000614703 SOCS7O14512 581 aa16.2■□□□□ 0.18
SNX9-202ENST00000614703 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
SNX9-202ENST00000614703 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
SNX9-202ENST00000614703 UHRF1BP1Q6BDS2 1440 aa16.17■□□□□ 0.18
SNX9-202ENST00000614703 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
SNX9-202ENST00000614703 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
SNX9-202ENST00000614703 ZNF518AQ6AHZ1 1483 aa16.14■□□□□ 0.17
SNX9-202ENST00000614703 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
SNX9-202ENST00000614703 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
SNX9-202ENST00000614703 PTPRTO14522 1441 aa16.11■□□□□ 0.17
SNX9-202ENST00000614703 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
SNX9-202ENST00000614703 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
SNX9-202ENST00000614703 ESF1Q9H501 851 aaKnown RBP16.11■□□□□ 0.17
SNX9-202ENST00000614703 MYT1LQ9UL68 1186 aa16.1■□□□□ 0.17
SNX9-202ENST00000614703 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
SNX9-202ENST00000614703 FMN1Q68DA7 1419 aa16.09■□□□□ 0.17
SNX9-202ENST00000614703 IQSEC2Q5JU85 1478 aa16.09■□□□□ 0.17
SNX9-202ENST00000614703 REREQ9P2R6 1566 aa16.09■□□□□ 0.17
SNX9-202ENST00000614703 KDM5CP41229 1560 aa16.08■□□□□ 0.16
SNX9-202ENST00000614703 KIF14Q15058 1648 aa16.08■□□□□ 0.16
SNX9-202ENST00000614703 ATP1B4Q9UN42 357 aaPredicted RBP16.07■□□□□ 0.16
SNX9-202ENST00000614703 ARHGAP5Q13017 1502 aa16.06■□□□□ 0.16
SNX9-202ENST00000614703 CLIP1P30622 1438 aa16.06■□□□□ 0.16
SNX9-202ENST00000614703 C3P01024 1663 aa16.05■□□□□ 0.16
SNX9-202ENST00000614703 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
SNX9-202ENST00000614703 TRAPPC8Q9Y2L5 1435 aa16.03■□□□□ 0.16
SNX9-202ENST00000614703 AFAP1Q8N556 730 aa16.03■□□□□ 0.16
SNX9-202ENST00000614703 AGLP35573 1532 aa16.03■□□□□ 0.16
SNX9-202ENST00000614703 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
SNX9-202ENST00000614703 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.16
SNX9-202ENST00000614703 CNTLNQ9NXG0 1405 aa16.02■□□□□ 0.16
SNX9-202ENST00000614703 LTBP4Q8N2S1 1624 aa15.99■□□□□ 0.15
SNX9-202ENST00000614703 ABCA6Q8N139 1617 aa15.98■□□□□ 0.15
SNX9-202ENST00000614703 NCOA1Q15788 1441 aa15.98■□□□□ 0.15
SNX9-202ENST00000614703 CDC42BPBQ9Y5S2 1711 aa15.97■□□□□ 0.15
SNX9-202ENST00000614703 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.15
SNX9-202ENST00000614703 NPATQ14207 1427 aa15.95■□□□□ 0.14
SNX9-202ENST00000614703 MROH2AA6NES4 1674 aa15.95■□□□□ 0.14
SNX9-202ENST00000614703 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
SNX9-202ENST00000614703 ABCC1P33527 1531 aa15.94■□□□□ 0.14
SNX9-202ENST00000614703 ITSN2Q9NZM3 1697 aa15.93■□□□□ 0.14
SNX9-202ENST00000614703 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
SNX9-202ENST00000614703 CAMSAP1Q5T5Y3 1602 aa15.93■□□□□ 0.14
SNX9-202ENST00000614703 KIDINS220Q9ULH0 1771 aa15.91■□□□□ 0.14
SNX9-202ENST00000614703 UBAP1LF5GYI3 381 aa15.9■□□□□ 0.14
SNX9-202ENST00000614703 PKD2Q13563 968 aa15.9■□□□□ 0.14
SNX9-202ENST00000614703 CCDC18Q5T9S5 1454 aa15.9■□□□□ 0.14
SNX9-202ENST00000614703 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
SNX9-202ENST00000614703 ZMYM3Q14202 1370 aa15.87■□□□□ 0.13
SNX9-202ENST00000614703 PLA2R1Q13018 1463 aa15.87■□□□□ 0.13
SNX9-202ENST00000614703 LRRIQ1Q96JM4 1722 aa15.87■□□□□ 0.13
SNX9-202ENST00000614703 ZNF142P52746 1687 aaPredicted RBP15.86■□□□□ 0.13
SNX9-202ENST00000614703 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
SNX9-202ENST00000614703 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
SNX9-202ENST00000614703 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
SNX9-202ENST00000614703 ZNF335Q9H4Z2 1342 aaPredicted RBP15.84■□□□□ 0.13
SNX9-202ENST00000614703 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
SNX9-202ENST00000614703 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
SNX9-202ENST00000614703 MYO3AQ8NEV4 1616 aa15.83■□□□□ 0.12
SNX9-202ENST00000614703 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
SNX9-202ENST00000614703 CEP170BQ9Y4F5 1589 aaPredicted RBP15.82■□□□□ 0.12
SNX9-202ENST00000614703 CLTCQ00610 1675 aaKnown RBP15.81■□□□□ 0.12
SNX9-202ENST00000614703 TCOF1Q13428 1488 aaKnown RBP15.81■□□□□ 0.12
SNX9-202ENST00000614703 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
SNX9-202ENST00000614703 PLEKHH2Q8IVE3 1493 aa15.8■□□□□ 0.12
SNX9-202ENST00000614703 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
SNX9-202ENST00000614703 ATP7AQ04656 1500 aa15.78■□□□□ 0.12
SNX9-202ENST00000614703 SYCP2Q9BX26 1530 aa15.78■□□□□ 0.12
SNX9-202ENST00000614703 PTPRKQ15262 1439 aa15.78■□□□□ 0.12
SNX9-202ENST00000614703 KIAA1107Q9UPP5 1409 aa15.78■□□□□ 0.12
SNX9-202ENST00000614703 PLXNC1O60486 1568 aa15.78■□□□□ 0.12
SNX9-202ENST00000614703 A2MP01023 1474 aa15.78■□□□□ 0.12
SNX9-202ENST00000614703 TOM1O60784 492 aa15.77■□□□□ 0.12
SNX9-202ENST00000614703 FYCO1Q9BQS8 1478 aa15.76■□□□□ 0.11
SNX9-202ENST00000614703 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
SNX9-202ENST00000614703 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
SNX9-202ENST00000614703 CPS1P31327 1500 aa15.75■□□□□ 0.11
SNX9-202ENST00000614703 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■■■ 27.1
SNX9-202ENST00000614703 GGT6Q6P531 493 aa15.75■□□□□ 0.11
SNX9-202ENST00000614703 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
SNX9-202ENST00000614703 ADGBQ8N7X0 1667 aa15.74■□□□□ 0.11
SNX9-202ENST00000614703 A2ML1A8K2U0 1454 aa15.74■□□□□ 0.11
SNX9-202ENST00000614703 CFDP1Q9UEE9 299 aaPredicted RBP15.74■□□□□ 0.11
SNX9-202ENST00000614703 MED1Q15648 1581 aaPredicted RBP15.72■□□□□ 0.11
SNX9-202ENST00000614703 POLR1AO95602 1720 aaPredicted RBP15.71■□□□□ 0.11
SNX9-202ENST00000614703 DNMT1P26358 1616 aaKnown RBP15.71■□□□□ 0.11
SNX9-202ENST00000614703 HSPA1LP34931 641 aa15.7■□□□□ 0.1
SNX9-202ENST00000614703 PIP4K2BP78356 416 aa15.7■□□□□ 0.1
SNX9-202ENST00000614703 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
SNX9-202ENST00000614703 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
SNX9-202ENST00000614703 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
SNX9-202ENST00000614703 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms