RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 RICTORQ6R327 1708 aa11.89□□□□□ -0.51
TARDBP-216ENST00000614494 ZFYVE16Q7Z3T8 1539 aa11.89□□□□□ -0.51
TARDBP-216ENST00000614494 KIF14Q15058 1648 aa11.89□□□□□ -0.51
TARDBP-216ENST00000614494 ARID4BQ4LE39 1312 aaPredicted RBP11.88□□□□□ -0.51
TARDBP-216ENST00000614494 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
TARDBP-216ENST00000614494 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
TARDBP-216ENST00000614494 CCDC18Q5T9S5 1454 aa11.88□□□□□ -0.51
TARDBP-216ENST00000614494 ARHGAP35Q9NRY4 1499 aa11.87□□□□□ -0.51
TARDBP-216ENST00000614494 CDK13Q14004 1512 aaKnown RBP11.86□□□□□ -0.51
TARDBP-216ENST00000614494 EFCAB2Q5VUJ9 269 aa11.86□□□□□ -0.51
TARDBP-216ENST00000614494 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
TARDBP-216ENST00000614494 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
TARDBP-216ENST00000614494 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
TARDBP-216ENST00000614494 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
TARDBP-216ENST00000614494 PCF11O94913 1555 aaKnown RBP11.84□□□□□ -0.51
TARDBP-216ENST00000614494 MADDQ8WXG6 1647 aa11.83□□□□□ -0.52
TARDBP-216ENST00000614494 C9orf84Q5VXU9 1444 aa11.82□□□□□ -0.52
TARDBP-216ENST00000614494 CASKIN1Q8WXD9 1431 aa11.81□□□□□ -0.52
TARDBP-216ENST00000614494 ATP10AO60312 1499 aa11.81□□□□□ -0.52
TARDBP-216ENST00000614494 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
TARDBP-216ENST00000614494 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
TARDBP-216ENST00000614494 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-216ENST00000614494 KDM5CP41229 1560 aa11.79□□□□□ -0.52
TARDBP-216ENST00000614494 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
TARDBP-216ENST00000614494 LMTK3Q96Q04 1460 aa11.78□□□□□ -0.52
TARDBP-216ENST00000614494 ILDR1Q86SU0 546 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-216ENST00000614494 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
TARDBP-216ENST00000614494 YEATS2Q9ULM3 1422 aa11.77□□□□□ -0.52
TARDBP-216ENST00000614494 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
TARDBP-216ENST00000614494 ARHGEF12Q9NZN5 1544 aa11.76□□□□□ -0.53
TARDBP-216ENST00000614494 PREX2Q70Z35 1606 aa11.76□□□□□ -0.53
TARDBP-216ENST00000614494 FER1L4A9Z1Z3 1794 aa11.75□□□□□ -0.53
TARDBP-216ENST00000614494 PLEKHH2Q8IVE3 1493 aa11.74□□□□□ -0.53
TARDBP-216ENST00000614494 ABCC1P33527 1531 aa11.73□□□□□ -0.53
TARDBP-216ENST00000614494 AGLP35573 1532 aa11.73□□□□□ -0.53
TARDBP-216ENST00000614494 FBXO41Q8TF61 875 aa11.73□□□□□ -0.53
TARDBP-216ENST00000614494 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
TARDBP-216ENST00000614494 PREX1Q8TCU6 1659 aa11.71□□□□□ -0.54
TARDBP-216ENST00000614494 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.54
TARDBP-216ENST00000614494 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
TARDBP-216ENST00000614494 CDC42BPBQ9Y5S2 1711 aa11.69□□□□□ -0.54
TARDBP-216ENST00000614494 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
TARDBP-216ENST00000614494 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
TARDBP-216ENST00000614494 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
TARDBP-216ENST00000614494 ITSN2Q9NZM3 1697 aa11.68□□□□□ -0.54
TARDBP-216ENST00000614494 UHRF1BP1Q6BDS2 1440 aa11.68□□□□□ -0.54
TARDBP-216ENST00000614494 AFAP1Q8N556 730 aa11.67□□□□□ -0.54
TARDBP-216ENST00000614494 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
TARDBP-216ENST00000614494 SIGLEC1Q9BZZ2 1709 aa11.66□□□□□ -0.54
TARDBP-216ENST00000614494 MLECQ14165 292 aa11.66□□□□□ -0.54
TARDBP-216ENST00000614494 ABCA6Q8N139 1617 aa11.66□□□□□ -0.54
TARDBP-216ENST00000614494 CDC42BPAQ5VT25 1732 aa11.65□□□□□ -0.54
TARDBP-216ENST00000614494 MTUS2Q5JR59 1369 aa11.65□□□□□ -0.55
TARDBP-216ENST00000614494 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.55
TARDBP-216ENST00000614494 NPATQ14207 1427 aa11.64□□□□□ -0.55
TARDBP-216ENST00000614494 TRAPPC8Q9Y2L5 1435 aa11.64□□□□□ -0.55
TARDBP-216ENST00000614494 SETD1BQ9UPS6 1966 aaKnown RBP11.64□□□□□ -0.55
TARDBP-216ENST00000614494 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
TARDBP-216ENST00000614494 GPATCH8Q9UKJ3 1502 aaKnown RBP11.64□□□□□ -0.55
TARDBP-216ENST00000614494 SAMD9LQ8IVG5 1584 aa11.63□□□□□ -0.55
TARDBP-216ENST00000614494 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
TARDBP-216ENST00000614494 SPAG9O60271 1321 aaKnown RBP11.62□□□□□ -0.55
TARDBP-216ENST00000614494 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
TARDBP-216ENST00000614494 SYCP2Q9BX26 1530 aa11.62□□□□□ -0.55
TARDBP-216ENST00000614494 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-216ENST00000614494 KIDINS220Q9ULH0 1771 aa11.62□□□□□ -0.55
TARDBP-216ENST00000614494 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
TARDBP-216ENST00000614494 FAM135AQ9P2D6 1515 aa11.61□□□□□ -0.55
TARDBP-216ENST00000614494 INO80Q9ULG1 1556 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-216ENST00000614494 CEP162Q5TB80 1403 aa11.6□□□□□ -0.55
TARDBP-216ENST00000614494 HSPA2P54652 639 aa11.6□□□□□ -0.55
TARDBP-216ENST00000614494 PTPRTO14522 1441 aa11.6□□□□□ -0.55
TARDBP-216ENST00000614494 PLXNC1O60486 1568 aa11.59□□□□□ -0.55
TARDBP-216ENST00000614494 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
TARDBP-216ENST00000614494 RTEL1-TNFRSF6BF6WH68 1400 aa11.59□□□□□ -0.55
TARDBP-216ENST00000614494 C3P01024 1663 aa11.59□□□□□ -0.55
TARDBP-216ENST00000614494 A2MP01023 1474 aa11.58□□□□□ -0.56
TARDBP-216ENST00000614494 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-216ENST00000614494 ADGBQ8N7X0 1667 aa11.57□□□□□ -0.56
TARDBP-216ENST00000614494 CERKQ8TCT0 537 aa11.57□□□□□ -0.56
TARDBP-216ENST00000614494 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
TARDBP-216ENST00000614494 TIAM1Q13009 1591 aa11.55□□□□□ -0.56
TARDBP-216ENST00000614494 CEBPAP49715 358 aaPredicted RBP11.54□□□□□ -0.56
TARDBP-216ENST00000614494 SUPT6HQ7KZ85 1726 aaKnown RBP11.54□□□□□ -0.56
TARDBP-216ENST00000614494 NCOA1Q15788 1441 aa11.53□□□□□ -0.56
TARDBP-216ENST00000614494 PLA2R1Q13018 1463 aa11.53□□□□□ -0.56
TARDBP-216ENST00000614494 CCDC141Q6ZP82 1450 aa11.53□□□□□ -0.56
TARDBP-216ENST00000614494 HNRNPMP52272 730 aaKnown RBP eCLIP11.53□□□□□ -0.56
TARDBP-216ENST00000614494 ZMYM3Q14202 1370 aa11.53□□□□□ -0.56
TARDBP-216ENST00000614494 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.56
TARDBP-216ENST00000614494 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
TARDBP-216ENST00000614494 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
TARDBP-216ENST00000614494 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
TARDBP-216ENST00000614494 PKD2Q13563 968 aa11.5□□□□□ -0.57
TARDBP-216ENST00000614494 DHX29Q7Z478 1369 aaKnown RBP11.5□□□□□ -0.57
TARDBP-216ENST00000614494 NCOA2Q15596 1464 aa11.5□□□□□ -0.57
TARDBP-216ENST00000614494 ARHGEF5Q12774 1597 aa11.5□□□□□ -0.57
TARDBP-216ENST00000614494 VPS8Q8N3P4 1428 aa11.49□□□□□ -0.57
TARDBP-216ENST00000614494 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
TARDBP-216ENST00000614494 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms