RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 FOXD4L3Q6VB84 417 aaPredicted RBP9.01□□□□□ -0.97
ALMS1-207ENST00000614410 CHMP3Q9Y3E7 222 aa9.01□□□□□ -0.97
ALMS1-207ENST00000614410 CCAR2Q8N163 923 aaKnown RBP9□□□□□ -0.97
ALMS1-207ENST00000614410 BCL11BQ9C0K0 894 aaPredicted RBP9□□□□□ -0.97
ALMS1-207ENST00000614410 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
ALMS1-207ENST00000614410 CEP89Q96ST8 783 aa8.99□□□□□ -0.97
ALMS1-207ENST00000614410 RASSF8Q8NHQ8 419 aa8.99□□□□□ -0.97
ALMS1-207ENST00000614410 TPM4P67936 248 aa8.99□□□□□ -0.97
ALMS1-207ENST00000614410 RTF1Q92541 710 aaKnown RBP8.99□□□□□ -0.97
ALMS1-207ENST00000614410 KAT6BQ8WYB5 2073 aa8.98□□□□□ -0.97
ALMS1-207ENST00000614410 GBP4Q96PP9 640 aa8.98□□□□□ -0.97
ALMS1-207ENST00000614410 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
ALMS1-207ENST00000614410 VPS53Q5VIR6 699 aa8.98□□□□□ -0.97
ALMS1-207ENST00000614410 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
ALMS1-207ENST00000614410 CHMP7Q8WUX9 453 aaPredicted RBP8.97□□□□□ -0.97
ALMS1-207ENST00000614410 CHMP4BQ9H444 224 aaKnown RBP8.97□□□□□ -0.97
ALMS1-207ENST00000614410 MS4A1P11836 297 aa8.97□□□□□ -0.97
ALMS1-207ENST00000614410 CALD1Q05682 793 aaKnown RBP8.97□□□□□ -0.97
ALMS1-207ENST00000614410 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
ALMS1-207ENST00000614410 SIN3AQ96ST3 1273 aa8.97□□□□□ -0.97
ALMS1-207ENST00000614410 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.97□□□□□ -0.97
ALMS1-207ENST00000614410 SRPK2P78362 688 aaKnown RBP8.96□□□□□ -0.97
ALMS1-207ENST00000614410 TAF7LQ5H9L4 462 aa8.96□□□□□ -0.97
ALMS1-207ENST00000614410 GORABQ5T7V8 394 aa8.96□□□□□ -0.97
ALMS1-207ENST00000614410 TIMELESSQ9UNS1 1208 aa8.96□□□□□ -0.98
ALMS1-207ENST00000614410 HSP90AA2PQ14568 343 aaPredicted RBP8.96□□□□□ -0.98
ALMS1-207ENST00000614410 MFAP1P55081 439 aaKnown RBP8.96□□□□□ -0.98
ALMS1-207ENST00000614410 G3V3G9 751 aa8.95□□□□□ -0.98
ALMS1-207ENST00000614410 SETQ01105 290 aaPredicted RBP8.95□□□□□ -0.98
ALMS1-207ENST00000614410 DCAF8Q5TAQ9 597 aa8.95□□□□□ -0.98
ALMS1-207ENST00000614410 STK26Q9P289 416 aa8.95□□□□□ -0.98
ALMS1-207ENST00000614410 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
ALMS1-207ENST00000614410 MLECQ14165 292 aa8.95□□□□□ -0.98
ALMS1-207ENST00000614410 TPD52L1Q16890 204 aaPredicted RBP8.94□□□□□ -0.98
ALMS1-207ENST00000614410 CALRP27797 417 aaKnown RBP8.94□□□□□ -0.98
ALMS1-207ENST00000614410 MARCH6O60337 910 aa8.94□□□□□ -0.98
ALMS1-207ENST00000614410 GOLGA6L3A6NEY3 463 aa8.94□□□□□ -0.98
ALMS1-207ENST00000614410 SYAP1Q96A49 352 aaPredicted RBP8.93□□□□□ -0.98
ALMS1-207ENST00000614410 SF3A1Q15459 793 aaKnown RBP8.93□□□□□ -0.98
ALMS1-207ENST00000614410 ZNF592Q92610 1267 aa8.93□□□□□ -0.98
ALMS1-207ENST00000614410 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
ALMS1-207ENST00000614410 ITPRIPQ8IWB1 547 aa8.93□□□□□ -0.98
ALMS1-207ENST00000614410 ZNF771Q7L3S4 317 aaPredicted RBP8.93□□□□□ -0.98
ALMS1-207ENST00000614410 SLC4A10Q6U841 1118 aa8.93□□□□□ -0.98
ALMS1-207ENST00000614410 TMX4Q9H1E5 349 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-207ENST00000614410 DCAF11Q8TEB1 546 aa8.92□□□□□ -0.98
ALMS1-207ENST00000614410 TPM3P06753 285 aa8.91□□□□□ -0.98
ALMS1-207ENST00000614410 FRAT2O75474 233 aaPredicted RBP8.91□□□□□ -0.98
ALMS1-207ENST00000614410 TOMM22Q9NS69 142 aa8.91□□□□□ -0.98
ALMS1-207ENST00000614410 HTATSF1O43719 755 aaKnown RBP8.91□□□□□ -0.98
ALMS1-207ENST00000614410 MORC1Q86VD1 984 aa8.9□□□□□ -0.98
ALMS1-207ENST00000614410 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.98
ALMS1-207ENST00000614410 PLEKHD1A6NEE1 506 aa8.89□□□□□ -0.99
ALMS1-207ENST00000614410 GOLGA6L19H0YKK7 550 aa8.88□□□□□ -0.99
ALMS1-207ENST00000614410 RAD21O60216 631 aa8.88□□□□□ -0.99
ALMS1-207ENST00000614410 RRP12Q5JTH9 1297 aaKnown RBP8.88□□□□□ -0.99
ALMS1-207ENST00000614410 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
ALMS1-207ENST00000614410 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
ALMS1-207ENST00000614410 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
ALMS1-207ENST00000614410 PCMTD1Q96MG8 357 aaPredicted RBP8.88□□□□□ -0.99
ALMS1-207ENST00000614410 CLUAP1Q96AJ1 413 aa8.88□□□□□ -0.99
ALMS1-207ENST00000614410 TMF1P82094 1093 aa8.87□□□□□ -0.99
ALMS1-207ENST00000614410 CCDC34Q96HJ3 373 aa8.87□□□□□ -0.99
ALMS1-207ENST00000614410 H3BQV1 296 aa8.87□□□□□ -0.99
ALMS1-207ENST00000614410 IFFO2Q5TF58 517 aa8.87□□□□□ -0.99
ALMS1-207ENST00000614410 CNKSR2Q8WXI2 1034 aa8.87□□□□□ -0.99
ALMS1-207ENST00000614410 FBXW7Q969H0 707 aa8.87□□□□□ -0.99
ALMS1-207ENST00000614410 RILPL2Q969X0 211 aa8.87□□□□□ -0.99
ALMS1-207ENST00000614410 IPO8O15397 1037 aaKnown RBP8.87□□□□□ -0.99
ALMS1-207ENST00000614410 TRHP20396 242 aaPredicted RBP8.86□□□□□ -0.99
ALMS1-207ENST00000614410 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
ALMS1-207ENST00000614410 RCAN3Q9UKA8 241 aa8.86□□□□□ -0.99
ALMS1-207ENST00000614410 CSPP1Q1MSJ5 1256 aa8.86□□□□□ -0.99
ALMS1-207ENST00000614410 U2AF1L5P0DN76 240 aaPredicted RBP8.86□□□□□ -0.99
ALMS1-207ENST00000614410 U2AF1Q01081 240 aaKnown RBP eCLIP8.86□□□□□ -0.99
ALMS1-207ENST00000614410 GPATCH3Q96I76 525 aa8.86□□□□□ -0.99
ALMS1-207ENST00000614410 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
ALMS1-207ENST00000614410 SKIDA1Q1XH10 827 aa8.85□□□□□ -0.99
ALMS1-207ENST00000614410 FAM184AQ8NB25 1140 aa8.85□□□□□ -0.99
ALMS1-207ENST00000614410 CCDC146Q8IYE0 955 aa8.85□□□□□ -0.99
ALMS1-207ENST00000614410 PHF14O94880 888 aa8.84□□□□□ -0.99
ALMS1-207ENST00000614410 MCTP1Q6DN14 999 aa8.84□□□□□ -0.99
ALMS1-207ENST00000614410 SMC4Q9NTJ3 1288 aa8.84□□□□□ -0.99
ALMS1-207ENST00000614410 FAM13BQ9NYF5 915 aa8.84□□□□□ -0.99
ALMS1-207ENST00000614410 RWDD1Q9H446 243 aaPredicted RBP8.84□□□□□ -0.99
ALMS1-207ENST00000614410 KIF16BQ96L93 1317 aa8.84□□□□□ -0.99
ALMS1-207ENST00000614410 NGEFQ8N5V2 710 aa8.84□□□□□ -0.99
ALMS1-207ENST00000614410 LTV1Q96GA3 475 aaPredicted RBP8.84□□□□□ -0.99
ALMS1-207ENST00000614410 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
ALMS1-207ENST00000614410 DHX37Q8IY37 1157 aaKnown RBP8.83□□□□□ -1
ALMS1-207ENST00000614410 BECN2A8MW95 431 aa8.83□□□□□ -1
ALMS1-207ENST00000614410 DCAF1Q9Y4B6 1507 aa8.83□□□□□ -1
ALMS1-207ENST00000614410 NUTM2FA1L443 756 aa8.83□□□□□ -1
ALMS1-207ENST00000614410 DDX49Q9Y6V7 483 aaKnown RBP8.82□□□□□ -1
ALMS1-207ENST00000614410 ZCCHC6Q5VYS8 1495 aaKnown RBP8.82□□□□□ -1
ALMS1-207ENST00000614410 FOXD1Q16676 465 aa8.82□□□□□ -1
ALMS1-207ENST00000614410 SAMD1Q6SPF0 538 aaPredicted RBP8.82□□□□□ -1
ALMS1-207ENST00000614410 HOMER1Q86YM7 354 aa8.82□□□□□ -1
ALMS1-207ENST00000614410 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
ALMS1-207ENST00000614410 IPO9Q96P70 1041 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms