RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 HS3ST6Q96QI5 342 aa12.88□□□□□ -0.35
TARDBP-214ENST00000613177 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
TARDBP-214ENST00000613177 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
TARDBP-214ENST00000613177 KRTAP3-3Q9BYR6 98 aa12.81□□□□□ -0.36
TARDBP-214ENST00000613177 KRTAP3-2Q9BYR7 98 aa12.81□□□□□ -0.36
TARDBP-214ENST00000613177 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
TARDBP-214ENST00000613177 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
TARDBP-214ENST00000613177 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
TARDBP-214ENST00000613177 KIF3CO14782 793 aa12.78□□□□□ -0.36
TARDBP-214ENST00000613177 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
TARDBP-214ENST00000613177 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
TARDBP-214ENST00000613177 PPP1R37O75864 691 aa12.74□□□□□ -0.37
TARDBP-214ENST00000613177 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
TARDBP-214ENST00000613177 ERBB3P21860 1342 aa12.73□□□□□ -0.37
TARDBP-214ENST00000613177 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
TARDBP-214ENST00000613177 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
TARDBP-214ENST00000613177 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
TARDBP-214ENST00000613177 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
TARDBP-214ENST00000613177 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.391e-10■■■■□ 25
TARDBP-214ENST00000613177 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
TARDBP-214ENST00000613177 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
TARDBP-214ENST00000613177 SLC34A2O95436 690 aa12.61□□□□□ -0.39
TARDBP-214ENST00000613177 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
TARDBP-214ENST00000613177 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
TARDBP-214ENST00000613177 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-214ENST00000613177 PCDHGA4Q9Y5G9 962 aa12.56□□□□□ -0.4
TARDBP-214ENST00000613177 NUDT7P0C024 238 aa12.53□□□□□ -0.4
TARDBP-214ENST00000613177 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-214ENST00000613177 FOXK1P85037 733 aa12.5□□□□□ -0.41
TARDBP-214ENST00000613177 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
TARDBP-214ENST00000613177 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
TARDBP-214ENST00000613177 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
TARDBP-214ENST00000613177 DSG2Q14126 1118 aa12.46□□□□□ -0.41
TARDBP-214ENST00000613177 PLPP6Q8IY26 295 aa12.46□□□□□ -0.41
TARDBP-214ENST00000613177 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.41
TARDBP-214ENST00000613177 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
TARDBP-214ENST00000613177 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.423e-9■■□□□ 11.9
TARDBP-214ENST00000613177 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
TARDBP-214ENST00000613177 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
TARDBP-214ENST00000613177 PBX2P40425 430 aa12.4□□□□□ -0.42
TARDBP-214ENST00000613177 RNF166Q96A37 237 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-214ENST00000613177 MYT1LQ9UL68 1186 aa12.39□□□□□ -0.43
TARDBP-214ENST00000613177 PTGER2P43116 358 aa12.37□□□□□ -0.43
TARDBP-214ENST00000613177 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
TARDBP-214ENST00000613177 AXIN2Q9Y2T1 843 aa12.35□□□□□ -0.43
TARDBP-214ENST00000613177 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
TARDBP-214ENST00000613177 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-214ENST00000613177 OXER1Q8TDS5 423 aa12.33□□□□□ -0.44
TARDBP-214ENST00000613177 TBC1D12O60347 775 aa12.3□□□□□ -0.44
TARDBP-214ENST00000613177 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
TARDBP-214ENST00000613177 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
TARDBP-214ENST00000613177 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
TARDBP-214ENST00000613177 PDE4AP27815 886 aa12.27□□□□□ -0.45
TARDBP-214ENST00000613177 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
TARDBP-214ENST00000613177 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
TARDBP-214ENST00000613177 MFSD10Q14728 455 aa12.23□□□□□ -0.45
TARDBP-214ENST00000613177 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
TARDBP-214ENST00000613177 PSEN2P49810 448 aa12.21□□□□□ -0.45
TARDBP-214ENST00000613177 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
TARDBP-214ENST00000613177 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
TARDBP-214ENST00000613177 TK2O00142 265 aa12.19□□□□□ -0.46
TARDBP-214ENST00000613177 CADPS2Q86UW7 1296 aa12.19□□□□□ -0.46
TARDBP-214ENST00000613177 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
TARDBP-214ENST00000613177 HRO43593 1189 aa12.17□□□□□ -0.46
TARDBP-214ENST00000613177 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-214ENST00000613177 FOSBP53539 338 aa12.14□□□□□ -0.47
TARDBP-214ENST00000613177 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
TARDBP-214ENST00000613177 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
TARDBP-214ENST00000613177 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
TARDBP-214ENST00000613177 EVI5O60447 810 aa12.12□□□□□ -0.47
TARDBP-214ENST00000613177 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
TARDBP-214ENST00000613177 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
TARDBP-214ENST00000613177 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
TARDBP-214ENST00000613177 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
TARDBP-214ENST00000613177 VPS9D1Q9Y2B5 631 aa12.07□□□□□ -0.48
TARDBP-214ENST00000613177 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
TARDBP-214ENST00000613177 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
TARDBP-214ENST00000613177 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
TARDBP-214ENST00000613177 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
TARDBP-214ENST00000613177 HCSTQ9UBK5 93 aa12.04□□□□□ -0.48
TARDBP-214ENST00000613177 ZDHHC16Q969W1 377 aa12.03□□□□□ -0.48
TARDBP-214ENST00000613177 PTPREP23469 700 aa12.02□□□□□ -0.49
TARDBP-214ENST00000613177 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
TARDBP-214ENST00000613177 ZBED2Q9BTP6 218 aa12.01□□□□□ -0.49
TARDBP-214ENST00000613177 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
TARDBP-214ENST00000613177 BHMG1C9JSJ3 638 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-214ENST00000613177 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
TARDBP-214ENST00000613177 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
TARDBP-214ENST00000613177 STAC3Q96MF2 364 aa11.95□□□□□ -0.5
TARDBP-214ENST00000613177 DPYSL4O14531 572 aa11.93□□□□□ -0.5
TARDBP-214ENST00000613177 PHF14O94880 888 aa11.93□□□□□ -0.5
TARDBP-214ENST00000613177 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
TARDBP-214ENST00000613177 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
TARDBP-214ENST00000613177 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
TARDBP-214ENST00000613177 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
TARDBP-214ENST00000613177 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
TARDBP-214ENST00000613177 COL9A1P20849 921 aa11.89□□□□□ -0.51
TARDBP-214ENST00000613177 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-214ENST00000613177 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
TARDBP-214ENST00000613177 MRPL50Q8N5N7 158 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms