RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 EPRSP07814 1512 aaKnown RBP10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 IRX6P78412 446 aaPredicted RBP10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 HNRNPUQ00839 825 aaKnown RBP eCLIP10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 CDK13Q14004 1512 aaKnown RBP10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 FOXD1Q16676 465 aa10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 L3MBTL2Q969R5 705 aa10.4□□□□□ -0.74
PPARGC1A-217ENST00000613098 TEX14Q8IWB6 1497 aa10.4□□□□□ -0.75
PPARGC1A-217ENST00000613098 MPHOSPH9Q99550 1183 aa10.39□□□□□ -0.75
PPARGC1A-217ENST00000613098 NEFLP07196 543 aa10.39□□□□□ -0.75
PPARGC1A-217ENST00000613098 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
PPARGC1A-217ENST00000613098 MIA2Q96PC5 1412 aa10.37□□□□□ -0.75
PPARGC1A-217ENST00000613098 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
PPARGC1A-217ENST00000613098 PRKRIP1Q9H875 184 aaPredicted RBP10.37□□□□□ -0.75
PPARGC1A-217ENST00000613098 RPRD2Q5VT52 1461 aaKnown RBP10.37□□□□□ -0.75
PPARGC1A-217ENST00000613098 KIF13AQ9H1H9 1805 aa10.36□□□□□ -0.75
PPARGC1A-217ENST00000613098 FANCIQ9NVI1 1328 aa10.35□□□□□ -0.75
PPARGC1A-217ENST00000613098 ABCC5O15440 1437 aa10.35□□□□□ -0.75
PPARGC1A-217ENST00000613098 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.75
PPARGC1A-217ENST00000613098 IQGAP2Q13576 1575 aa10.34□□□□□ -0.75
PPARGC1A-217ENST00000613098 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
PPARGC1A-217ENST00000613098 DAPK1P53355 1430 aa10.34□□□□□ -0.75
PPARGC1A-217ENST00000613098 POLR1AO95602 1720 aaPredicted RBP10.33□□□□□ -0.76
PPARGC1A-217ENST00000613098 ADAMTS12P58397 1594 aa10.33□□□□□ -0.76
PPARGC1A-217ENST00000613098 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
PPARGC1A-217ENST00000613098 ZNF644Q9H582 1327 aaPredicted RBP10.33□□□□□ -0.76
PPARGC1A-217ENST00000613098 MAGI1Q96QZ7 1491 aaPredicted RBP10.33□□□□□ -0.76
PPARGC1A-217ENST00000613098 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
PPARGC1A-217ENST00000613098 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
PPARGC1A-217ENST00000613098 ROCK1Q13464 1354 aa10.32□□□□□ -0.76
PPARGC1A-217ENST00000613098 MBD5Q9P267 1494 aa10.32□□□□□ -0.76
PPARGC1A-217ENST00000613098 DHX29Q7Z478 1369 aaKnown RBP10.32□□□□□ -0.76
PPARGC1A-217ENST00000613098 PZPP20742 1482 aa10.31□□□□□ -0.76
PPARGC1A-217ENST00000613098 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
PPARGC1A-217ENST00000613098 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
PPARGC1A-217ENST00000613098 ZBED9Q6R2W3 1325 aa10.3□□□□□ -0.76
PPARGC1A-217ENST00000613098 NUP153P49790 1475 aaKnown RBP10.3□□□□□ -0.76
PPARGC1A-217ENST00000613098 ERICH6BQ5W0A0 696 aa10.29□□□□□ -0.76
PPARGC1A-217ENST00000613098 PPP4R2Q9NY27 417 aa10.29□□□□□ -0.76
PPARGC1A-217ENST00000613098 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
PPARGC1A-217ENST00000613098 FAM9BQ8IZU0 186 aa10.28□□□□□ -0.76
PPARGC1A-217ENST00000613098 RNF123Q5XPI4 1314 aa10.26□□□□□ -0.77
PPARGC1A-217ENST00000613098 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
PPARGC1A-217ENST00000613098 KIAA0556O60303 1618 aa10.26□□□□□ -0.77
PPARGC1A-217ENST00000613098 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
PPARGC1A-217ENST00000613098 CDK11AQ9UQ88 783 aaPredicted RBP10.25□□□□□ -0.77
PPARGC1A-217ENST00000613098 ZNF608Q9ULD9 1512 aaPredicted RBP10.25□□□□□ -0.77
PPARGC1A-217ENST00000613098 KDM5CP41229 1560 aa10.24□□□□□ -0.77
PPARGC1A-217ENST00000613098 SMG6Q86US8 1419 aaKnown RBP10.23□□□□□ -0.77
PPARGC1A-217ENST00000613098 GLI2P10070 1586 aa10.23□□□□□ -0.77
PPARGC1A-217ENST00000613098 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
PPARGC1A-217ENST00000613098 PRG4Q92954 1404 aaPredicted RBP10.22□□□□□ -0.77
PPARGC1A-217ENST00000613098 SLC4A1APQ9BWU0 796 aaKnown RBP10.22□□□□□ -0.77
PPARGC1A-217ENST00000613098 KIAA0586Q9BVV6 1533 aa10.22□□□□□ -0.77
PPARGC1A-217ENST00000613098 ADGRL2O95490 1459 aa10.21□□□□□ -0.77
PPARGC1A-217ENST00000613098 CAMSAP2Q08AD1 1489 aa10.21□□□□□ -0.77
PPARGC1A-217ENST00000613098 GPATCH8Q9UKJ3 1502 aaKnown RBP10.21□□□□□ -0.77
PPARGC1A-217ENST00000613098 KIF14Q15058 1648 aa10.21□□□□□ -0.78
PPARGC1A-217ENST00000613098 CROCC2H7BZ55 1655 aa10.2□□□□□ -0.78
PPARGC1A-217ENST00000613098 KIAA1107Q9UPP5 1409 aa10.19□□□□□ -0.78
PPARGC1A-217ENST00000613098 USP47Q96K76 1375 aa10.19□□□□□ -0.78
PPARGC1A-217ENST00000613098 UHRF1BP1Q6BDS2 1440 aa10.19□□□□□ -0.78
PPARGC1A-217ENST00000613098 ADGBQ8N7X0 1667 aa10.19□□□□□ -0.78
PPARGC1A-217ENST00000613098 PNISRQ8TF01 805 aaKnown RBP10.18□□□□□ -0.78
PPARGC1A-217ENST00000613098 ADCY10Q96PN6 1610 aa10.18□□□□□ -0.78
PPARGC1A-217ENST00000613098 AEBP2Q6ZN18 517 aaPredicted RBP10.18□□□□□ -0.78
PPARGC1A-217ENST00000613098 PLB1Q6P1J6 1458 aa10.18□□□□□ -0.78
PPARGC1A-217ENST00000613098 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
PPARGC1A-217ENST00000613098 PAK3O75914 559 aaPredicted RBP10.17□□□□□ -0.78
PPARGC1A-217ENST00000613098 LRPPRCP42704 1394 aaKnown RBP10.17□□□□□ -0.78
PPARGC1A-217ENST00000613098 SENP3-EIF4A1A0A087X0R7 540 aa10.16□□□□□ -0.78
PPARGC1A-217ENST00000613098 NUDCQ9Y266 331 aa10.16□□□□□ -0.78
PPARGC1A-217ENST00000613098 GRIN2AQ12879 1464 aa10.16□□□□□ -0.78
PPARGC1A-217ENST00000613098 E9PCH4 1651 aa10.15□□□□□ -0.78
PPARGC1A-217ENST00000613098 RALGAPBQ86X10 1494 aa10.15□□□□□ -0.78
PPARGC1A-217ENST00000613098 SYNJ2O15056 1496 aa10.15□□□□□ -0.78
PPARGC1A-217ENST00000613098 PKD2Q13563 968 aa10.15□□□□□ -0.78
PPARGC1A-217ENST00000613098 CDC42BPAQ5VT25 1732 aa10.15□□□□□ -0.78
PPARGC1A-217ENST00000613098 CEP170Q5SW79 1584 aa10.15□□□□□ -0.79
PPARGC1A-217ENST00000613098 ITSN2Q9NZM3 1697 aa10.14□□□□□ -0.79
PPARGC1A-217ENST00000613098 ARID4BQ4LE39 1312 aaPredicted RBP10.13□□□□□ -0.79
PPARGC1A-217ENST00000613098 ABCC10Q5T3U5 1492 aa10.13□□□□□ -0.79
PPARGC1A-217ENST00000613098 KDM5DQ9BY66 1539 aa10.13□□□□□ -0.79
PPARGC1A-217ENST00000613098 PTPRGP23470 1445 aa10.12□□□□□ -0.79
PPARGC1A-217ENST00000613098 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
PPARGC1A-217ENST00000613098 ANKRD50Q9ULJ7 1429 aa10.12□□□□□ -0.79
PPARGC1A-217ENST00000613098 DIP2BQ9P265 1576 aa10.11□□□□□ -0.79
PPARGC1A-217ENST00000613098 ARHGEF12Q9NZN5 1544 aa10.11□□□□□ -0.79
PPARGC1A-217ENST00000613098 CNGB1Q14028 1251 aaPredicted RBP10.11□□□□□ -0.79
PPARGC1A-217ENST00000613098 ABCA8O94911 1581 aa10.09□□□□□ -0.79
PPARGC1A-217ENST00000613098 ST20-MTHFSA0A0A6YYL1 179 aa10.09□□□□□ -0.79
PPARGC1A-217ENST00000613098 SHANK2Q9UPX8 1470 aa10.09□□□□□ -0.79
PPARGC1A-217ENST00000613098 ZNF326Q5BKZ1 582 aaKnown RBP10.09□□□□□ -0.79
PPARGC1A-217ENST00000613098 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
PPARGC1A-217ENST00000613098 NUP160Q12769 1436 aa10.08□□□□□ -0.8
PPARGC1A-217ENST00000613098 NOP58Q9Y2X3 529 aaKnown RBP10.08□□□□□ -0.8
PPARGC1A-217ENST00000613098 PER1O15534 1290 aaPredicted RBP10.08□□□□□ -0.8
PPARGC1A-217ENST00000613098 ATP10BO94823 1461 aa10.07□□□□□ -0.8
PPARGC1A-217ENST00000613098 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms