RNA–Protein interactions for RNA: ENST00000610435.4

KHDC1-207, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KHDC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-207ENST00000610435 ATP1B4Q9UN42 357 aaPredicted RBP30.58■■■□□ 2.49
KHDC1-207ENST00000610435 LMTK3Q96Q04 1460 aa30.57■■■□□ 2.48
KHDC1-207ENST00000610435 SCAPERQ9BY12 1400 aa30.56■■■□□ 2.48
KHDC1-207ENST00000610435 KIF14Q15058 1648 aa30.56■■■□□ 2.48
KHDC1-207ENST00000610435 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
KHDC1-207ENST00000610435 CDK11AQ9UQ88 783 aaPredicted RBP30.52■■■□□ 2.48
KHDC1-207ENST00000610435 LRRIQ1Q96JM4 1722 aa30.52■■■□□ 2.48
KHDC1-207ENST00000610435 FER1L4A9Z1Z3 1794 aa30.51■■■□□ 2.48
KHDC1-207ENST00000610435 TROQ12816 1431 aaPredicted RBP30.49■■■□□ 2.47
KHDC1-207ENST00000610435 EFCAB2Q5VUJ9 269 aa30.48■■■□□ 2.47
KHDC1-207ENST00000610435 CLIP1P30622 1438 aa30.46■■■□□ 2.47
KHDC1-207ENST00000610435 ARHGAP5Q13017 1502 aa30.44■■■□□ 2.46
KHDC1-207ENST00000610435 C9orf84Q5VXU9 1444 aa30.43■■■□□ 2.46
KHDC1-207ENST00000610435 ATP10AO60312 1499 aa30.43■■■□□ 2.46
KHDC1-207ENST00000610435 MLECQ14165 292 aa30.41■■■□□ 2.46
KHDC1-207ENST00000610435 PLPPR3Q6T4P5 718 aa30.41■■■□□ 2.46
KHDC1-207ENST00000610435 ZNF518AQ6AHZ1 1483 aa30.41■■■□□ 2.46
KHDC1-207ENST00000610435 ARHGEF12Q9NZN5 1544 aa30.39■■■□□ 2.46
KHDC1-207ENST00000610435 FBXO41Q8TF61 875 aa30.39■■■□□ 2.46
KHDC1-207ENST00000610435 KDM5CP41229 1560 aa30.39■■■□□ 2.46
KHDC1-207ENST00000610435 CDC42BPBQ9Y5S2 1711 aa30.37■■■□□ 2.45
KHDC1-207ENST00000610435 CCDC18Q5T9S5 1454 aa30.35■■■□□ 2.45
KHDC1-207ENST00000610435 PREX2Q70Z35 1606 aa30.34■■■□□ 2.45
KHDC1-207ENST00000610435 CASKIN1Q8WXD9 1431 aa30.32■■■□□ 2.44
KHDC1-207ENST00000610435 HSPA2P54652 639 aa30.32■■■□□ 2.44
KHDC1-207ENST00000610435 DIP2CQ9Y2E4 1556 aa30.3■■■□□ 2.44
KHDC1-207ENST00000610435 PREX1Q8TCU6 1659 aa30.28■■■□□ 2.44
KHDC1-207ENST00000610435 AFAP1Q8N556 730 aa30.28■■■□□ 2.44
KHDC1-207ENST00000610435 REREQ9P2R6 1566 aa30.27■■■□□ 2.44
KHDC1-207ENST00000610435 ABCC1P33527 1531 aa30.27■■■□□ 2.44
KHDC1-207ENST00000610435 ITSN2Q9NZM3 1697 aa30.27■■■□□ 2.44
KHDC1-207ENST00000610435 ABCA6Q8N139 1617 aa30.26■■■□□ 2.44
KHDC1-207ENST00000610435 MYT1LQ9UL68 1186 aa30.24■■■□□ 2.43
KHDC1-207ENST00000610435 CDC42BPAQ5VT25 1732 aa30.24■■■□□ 2.43
KHDC1-207ENST00000610435 FYCO1Q9BQS8 1478 aa30.23■■■□□ 2.43
KHDC1-207ENST00000610435 MLH3Q9UHC1 1453 aa30.23■■■□□ 2.43
KHDC1-207ENST00000610435 TRAPPC8Q9Y2L5 1435 aa30.18■■■□□ 2.42
KHDC1-207ENST00000610435 CEBPAP49715 358 aaPredicted RBP30.15■■■□□ 2.42
KHDC1-207ENST00000610435 KIDINS220Q9ULH0 1771 aa30.14■■■□□ 2.42
KHDC1-207ENST00000610435 AGLP35573 1532 aa30.14■■■□□ 2.42
KHDC1-207ENST00000610435 SETD1BQ9UPS6 1966 aaKnown RBP30.12■■■□□ 2.41
KHDC1-207ENST00000610435 C3P01024 1663 aa30.11■■■□□ 2.41
KHDC1-207ENST00000610435 UHRF1BP1Q6BDS2 1440 aa30.09■■■□□ 2.41
KHDC1-207ENST00000610435 SAMD9LQ8IVG5 1584 aa30.08■■■□□ 2.41
KHDC1-207ENST00000610435 STRCQ7RTU9 1775 aa30.05■■■□□ 2.4
KHDC1-207ENST00000610435 SYCP2Q9BX26 1530 aa30.05■■■□□ 2.4
KHDC1-207ENST00000610435 GPATCH8Q9UKJ3 1502 aaKnown RBP30.03■■■□□ 2.4
KHDC1-207ENST00000610435 CERKQ8TCT0 537 aa30.02■■■□□ 2.4
KHDC1-207ENST00000610435 ESF1Q9H501 851 aaKnown RBP30.01■■■□□ 2.39
KHDC1-207ENST00000610435 ZNF777Q9ULD5 760 aaPredicted RBP30■■■□□ 2.39
KHDC1-207ENST00000610435 CNTLNQ9NXG0 1405 aa29.98■■■□□ 2.39
KHDC1-207ENST00000610435 MROH2AA6NES4 1674 aa29.95■■■□□ 2.39
KHDC1-207ENST00000610435 DMRT2Q9Y5R5 561 aa29.95■■■□□ 2.39
KHDC1-207ENST00000610435 PLEKHH2Q8IVE3 1493 aa29.94■■■□□ 2.38
KHDC1-207ENST00000610435 SUPT6HQ7KZ85 1726 aaKnown RBP29.94■■■□□ 2.38
KHDC1-207ENST00000610435 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
KHDC1-207ENST00000610435 INO80Q9ULG1 1556 aaPredicted RBP29.94■■■□□ 2.38
KHDC1-207ENST00000610435 SPAG9O60271 1321 aaKnown RBP29.93■■■□□ 2.38
KHDC1-207ENST00000610435 KIAA1107Q9UPP5 1409 aa29.92■■■□□ 2.38
KHDC1-207ENST00000610435 CCNB3Q8WWL7 1395 aa29.91■■■□□ 2.38
KHDC1-207ENST00000610435 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
KHDC1-207ENST00000610435 HNRNPMP52272 730 aaKnown RBP eCLIP29.9■■■□□ 2.38
KHDC1-207ENST00000610435 CFDP1Q9UEE9 299 aaPredicted RBP29.9■■■□□ 2.38
KHDC1-207ENST00000610435 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
KHDC1-207ENST00000610435 PTPRTO14522 1441 aa29.86■■■□□ 2.37
KHDC1-207ENST00000610435 EHBP1L1Q8N3D4 1523 aa29.86■■■□□ 2.37
KHDC1-207ENST00000610435 TIAM1Q13009 1591 aa29.86■■■□□ 2.37
KHDC1-207ENST00000610435 NPATQ14207 1427 aa29.84■■■□□ 2.37
KHDC1-207ENST00000610435 A2MP01023 1474 aa29.84■■■□□ 2.37
KHDC1-207ENST00000610435 CLTCQ00610 1675 aaKnown RBP29.84■■■□□ 2.37
KHDC1-207ENST00000610435 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
KHDC1-207ENST00000610435 NCOA1Q15788 1441 aa29.79■■■□□ 2.36
KHDC1-207ENST00000610435 ZMYM3Q14202 1370 aa29.79■■■□□ 2.36
KHDC1-207ENST00000610435 CAMSAP1Q5T5Y3 1602 aa29.76■■■□□ 2.35
KHDC1-207ENST00000610435 MYO3AQ8NEV4 1616 aa29.75■■■□□ 2.35
KHDC1-207ENST00000610435 ZNF142P52746 1687 aaPredicted RBP29.75■■■□□ 2.35
KHDC1-207ENST00000610435 CEP162Q5TB80 1403 aa29.74■■■□□ 2.35
KHDC1-207ENST00000610435 MBD5Q9P267 1494 aa29.72■■■□□ 2.35
KHDC1-207ENST00000610435 LTBP4Q8N2S1 1624 aa29.71■■■□□ 2.35
KHDC1-207ENST00000610435 ZNF644Q9H582 1327 aaPredicted RBP29.71■■■□□ 2.35
KHDC1-207ENST00000610435 GGT6Q6P531 493 aa29.69■■■□□ 2.34
KHDC1-207ENST00000610435 PTPRKQ15262 1439 aa29.68■■■□□ 2.34
KHDC1-207ENST00000610435 RTEL1-TNFRSF6BF6WH68 1400 aa29.67■■■□□ 2.34
KHDC1-207ENST00000610435 CEP170BQ9Y4F5 1589 aaPredicted RBP29.67■■■□□ 2.34
KHDC1-207ENST00000610435 IQSEC2Q5JU85 1478 aa29.64■■■□□ 2.34
KHDC1-207ENST00000610435 PPP6R1Q9UPN7 881 aa29.63■■■□□ 2.33
KHDC1-207ENST00000610435 PLA2R1Q13018 1463 aa29.62■■■□□ 2.33
KHDC1-207ENST00000610435 NCOA2Q15596 1464 aa29.62■■■□□ 2.33
KHDC1-207ENST00000610435 CCDC141Q6ZP82 1450 aa29.61■■■□□ 2.33
KHDC1-207ENST00000610435 CAMSAP2Q08AD1 1489 aa29.61■■■□□ 2.33
KHDC1-207ENST00000610435 DHX29Q7Z478 1369 aaKnown RBP29.59■■■□□ 2.33
KHDC1-207ENST00000610435 NCKAP5LQ9HCH0 1330 aa29.57■■■□□ 2.32
KHDC1-207ENST00000610435 TCOF1Q13428 1488 aaKnown RBP29.56■■■□□ 2.32
KHDC1-207ENST00000610435 FAM135AQ9P2D6 1515 aa29.54■■■□□ 2.32
KHDC1-207ENST00000610435 PKD2Q13563 968 aa29.53■■■□□ 2.32
KHDC1-207ENST00000610435 KDM5DQ9BY66 1539 aa29.52■■■□□ 2.32
KHDC1-207ENST00000610435 A2ML1A8K2U0 1454 aa29.52■■■□□ 2.32
KHDC1-207ENST00000610435 ARHGEF5Q12774 1597 aa29.52■■■□□ 2.32
KHDC1-207ENST00000610435 DNMT1P26358 1616 aaKnown RBP29.51■■■□□ 2.31
KHDC1-207ENST00000610435 RSPH4AQ5TD94 716 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms