RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 L3MBTL2Q969R5 705 aa30.65■■■□□ 2.5
SHANK2-220ENST00000608988 TEX14Q8IWB6 1497 aa30.65■■■□□ 2.5
SHANK2-220ENST00000608988 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
SHANK2-220ENST00000608988 ANKRD30BQ9BXX2 1392 aa30.64■■■□□ 2.5
SHANK2-220ENST00000608988 WDR62O43379 1518 aa30.63■■■□□ 2.49
SHANK2-220ENST00000608988 SPATA31E1Q6ZUB1 1445 aa30.62■■■□□ 2.49
SHANK2-220ENST00000608988 IRX6P78412 446 aaPredicted RBP30.62■■■□□ 2.49
SHANK2-220ENST00000608988 IQGAP2Q13576 1575 aa30.62■■■□□ 2.49
SHANK2-220ENST00000608988 DNMT1P26358 1616 aaKnown RBP30.59■■■□□ 2.49
SHANK2-220ENST00000608988 MRS2Q9HD23 443 aa30.59■■■□□ 2.49
SHANK2-220ENST00000608988 CHIC2Q9UKJ5 165 aa30.58■■■□□ 2.49
SHANK2-220ENST00000608988 TARBP1Q13395 1621 aaKnown RBP30.57■■■□□ 2.48
SHANK2-220ENST00000608988 DAPK1P53355 1430 aa30.55■■■□□ 2.48
SHANK2-220ENST00000608988 CCDC184Q52MB2 194 aa30.55■■■□□ 2.48
SHANK2-220ENST00000608988 SMG6Q86US8 1419 aaKnown RBP30.54■■■□□ 2.48
SHANK2-220ENST00000608988 C11orf95C9JLR9 678 aaPredicted RBP30.53■■■□□ 2.48
SHANK2-220ENST00000608988 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
SHANK2-220ENST00000608988 KIF7Q2M1P5 1343 aa30.5■■■□□ 2.47
SHANK2-220ENST00000608988 FAM9BQ8IZU0 186 aa30.48■■■□□ 2.47
SHANK2-220ENST00000608988 CDK13Q14004 1512 aaKnown RBP30.48■■■□□ 2.47
SHANK2-220ENST00000608988 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
SHANK2-220ENST00000608988 ARID4BQ4LE39 1312 aaPredicted RBP30.46■■■□□ 2.47
SHANK2-220ENST00000608988 NBPF8Q3BBV2 869 aa30.46■■■□□ 2.47
SHANK2-220ENST00000608988 ABCC5O15440 1437 aa30.45■■■□□ 2.47
SHANK2-220ENST00000608988 RNF123Q5XPI4 1314 aa30.43■■■□□ 2.46
SHANK2-220ENST00000608988 MBD5Q9P267 1494 aa30.42■■■□□ 2.46
SHANK2-220ENST00000608988 B4GALNT3Q6L9W6 998 aa30.38■■■□□ 2.45
SHANK2-220ENST00000608988 DHX29Q7Z478 1369 aaKnown RBP30.37■■■□□ 2.45
SHANK2-220ENST00000608988 KIF14Q15058 1648 aa30.36■■■□□ 2.45
SHANK2-220ENST00000608988 ADGBQ8N7X0 1667 aa30.36■■■□□ 2.45
SHANK2-220ENST00000608988 NUDCQ9Y266 331 aa30.35■■■□□ 2.45
SHANK2-220ENST00000608988 PZPP20742 1482 aa30.34■■■□□ 2.45
SHANK2-220ENST00000608988 FOXD1Q16676 465 aa30.33■■■□□ 2.45
SHANK2-220ENST00000608988 SLC4A1APQ9BWU0 796 aaKnown RBP30.33■■■□□ 2.45
SHANK2-220ENST00000608988 ROCK2O75116 1388 aaKnown RBP30.32■■■□□ 2.44
SHANK2-220ENST00000608988 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
SHANK2-220ENST00000608988 NOP58Q9Y2X3 529 aaKnown RBP30.29■■■□□ 2.44
SHANK2-220ENST00000608988 ADGRL2O95490 1459 aa30.29■■■□□ 2.44
SHANK2-220ENST00000608988 ITSN2Q9NZM3 1697 aa30.29■■■□□ 2.44
SHANK2-220ENST00000608988 KIAA0556O60303 1618 aa30.28■■■□□ 2.44
SHANK2-220ENST00000608988 KIAA1107Q9UPP5 1409 aa30.28■■■□□ 2.44
SHANK2-220ENST00000608988 KDM5CP41229 1560 aa30.27■■■□□ 2.44
SHANK2-220ENST00000608988 RAPGEF6Q8TEU7 1601 aa30.26■■■□□ 2.43
SHANK2-220ENST00000608988 BCORL1Q5H9F3 1711 aa30.24■■■□□ 2.43
SHANK2-220ENST00000608988 USP47Q96K76 1375 aa30.24■■■□□ 2.43
SHANK2-220ENST00000608988 UHRF1BP1Q6BDS2 1440 aa30.24■■■□□ 2.43
SHANK2-220ENST00000608988 NUP153P49790 1475 aaKnown RBP30.23■■■□□ 2.43
SHANK2-220ENST00000608988 KTN1Q86UP2 1357 aaKnown RBP30.23■■■□□ 2.43
SHANK2-220ENST00000608988 KIAA0586Q9BVV6 1533 aa30.22■■■□□ 2.43
SHANK2-220ENST00000608988 CROCC2H7BZ55 1655 aa30.22■■■□□ 2.43
SHANK2-220ENST00000608988 CAMSAP2Q08AD1 1489 aa30.2■■■□□ 2.42
SHANK2-220ENST00000608988 RALGAPBQ86X10 1494 aa30.19■■■□□ 2.42
SHANK2-220ENST00000608988 DISP1Q96F81 1524 aa30.18■■■□□ 2.42
SHANK2-220ENST00000608988 ARHGEF12Q9NZN5 1544 aa30.18■■■□□ 2.42
SHANK2-220ENST00000608988 ADCY10Q96PN6 1610 aa30.18■■■□□ 2.42
SHANK2-220ENST00000608988 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
SHANK2-220ENST00000608988 TROQ12816 1431 aaPredicted RBP30.17■■■□□ 2.42
SHANK2-220ENST00000608988 CCDC136Q96JN2 1154 aa30.16■■■□□ 2.42
SHANK2-220ENST00000608988 DEKP35659 375 aaKnown RBP30.14■■■□□ 2.42
SHANK2-220ENST00000608988 ANP32AP39687 249 aaKnown RBP30.14■■■□□ 2.42
SHANK2-220ENST00000608988 PNISRQ8TF01 805 aaKnown RBP30.12■■■□□ 2.41
SHANK2-220ENST00000608988 KIF15Q9NS87 1388 aa30.11■■■□□ 2.41
SHANK2-220ENST00000608988 LRPPRCP42704 1394 aaKnown RBP30.11■■■□□ 2.41
SHANK2-220ENST00000608988 ZNF644Q9H582 1327 aaPredicted RBP30.1■■■□□ 2.41
SHANK2-220ENST00000608988 IPO9Q96P70 1041 aaKnown RBP30.1■■■□□ 2.41
SHANK2-220ENST00000608988 BRD4O60885 1362 aaPredicted RBP30.09■■■□□ 2.41
SHANK2-220ENST00000608988 ANKRD30AQ9BXX3 1397 aa30.08■■■□□ 2.41
SHANK2-220ENST00000608988 KDM5DQ9BY66 1539 aa30.06■■■□□ 2.4
SHANK2-220ENST00000608988 GPATCH8Q9UKJ3 1502 aaKnown RBP30.06■■■□□ 2.4
SHANK2-220ENST00000608988 SHANK2Q9UPX8 1470 aa30.05■■■□□ 2.4
SHANK2-220ENST00000608988 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
SHANK2-220ENST00000608988 TMC1Q8TDI8 760 aa30.04■■■□□ 2.4
SHANK2-220ENST00000608988 RALBP1Q15311 655 aa30.03■■■□□ 2.4
SHANK2-220ENST00000608988 E9PCH4 1651 aa30.03■■■□□ 2.4
SHANK2-220ENST00000608988 CFDP1Q9UEE9 299 aaPredicted RBP30.02■■■□□ 2.4
SHANK2-220ENST00000608988 MYBBP1AQ9BQG0 1328 aaKnown RBP29.99■■■□□ 2.39
SHANK2-220ENST00000608988 PKD2Q13563 968 aa29.99■■■□□ 2.39
SHANK2-220ENST00000608988 ANKRD50Q9ULJ7 1429 aa29.98■■■□□ 2.39
SHANK2-220ENST00000608988 PAK3O75914 559 aaPredicted RBP29.98■■■□□ 2.39
SHANK2-220ENST00000608988 ARID3CA6NKF2 412 aa29.97■■■□□ 2.39
SHANK2-220ENST00000608988 ZBTB47Q9UFB7 747 aaPredicted RBP29.96■■■□□ 2.39
SHANK2-220ENST00000608988 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
SHANK2-220ENST00000608988 GRIN2AQ12879 1464 aa29.95■■■□□ 2.38
SHANK2-220ENST00000608988 PDE3BQ13370 1112 aa29.94■■■□□ 2.38
SHANK2-220ENST00000608988 CEP170Q5SW79 1584 aa29.94■■■□□ 2.38
SHANK2-220ENST00000608988 INSRP06213 1382 aa29.94■■■□□ 2.38
SHANK2-220ENST00000608988 TCERG1O14776 1098 aaKnown RBP29.93■■■□□ 2.38
SHANK2-220ENST00000608988 ZMYM4Q5VZL5 1548 aa29.92■■■□□ 2.38
SHANK2-220ENST00000608988 RRP1P56182 461 aaKnown RBP29.91■■■□□ 2.38
SHANK2-220ENST00000608988 CARD11Q9BXL7 1154 aa29.9■■■□□ 2.38
SHANK2-220ENST00000608988 RTL5Q5HYW3 569 aaPredicted RBP29.89■■■□□ 2.38
SHANK2-220ENST00000608988 PTPRGP23470 1445 aa29.88■■■□□ 2.37
SHANK2-220ENST00000608988 POLR3GLQ9BT43 218 aa29.88■■■□□ 2.37
SHANK2-220ENST00000608988 MS4A1P11836 297 aa29.87■■■□□ 2.37
SHANK2-220ENST00000608988 ZNF326Q5BKZ1 582 aaKnown RBP29.87■■■□□ 2.37
SHANK2-220ENST00000608988 CDC42BPAQ5VT25 1732 aa29.86■■■□□ 2.37
SHANK2-220ENST00000608988 NBR1Q14596 966 aa29.84■■■□□ 2.37
SHANK2-220ENST00000608988 C9orf84Q5VXU9 1444 aa29.83■■■□□ 2.37
SHANK2-220ENST00000608988 NUP155O75694 1391 aa29.82■■■□□ 2.37
SHANK2-220ENST00000608988 PARD3Q8TEW0 1356 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms