RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
LINC00343-210ENST00000608220 HOXB3P14651 431 aaPredicted RBP10.06□□□□□ -0.8
LINC00343-210ENST00000608220 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
LINC00343-210ENST00000608220 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
LINC00343-210ENST00000608220 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
LINC00343-210ENST00000608220 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
LINC00343-210ENST00000608220 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
LINC00343-210ENST00000608220 EMP3P54852 163 aa10.03□□□□□ -0.8
LINC00343-210ENST00000608220 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
LINC00343-210ENST00000608220 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
LINC00343-210ENST00000608220 KIF3CO14782 793 aa9.98□□□□□ -0.81
LINC00343-210ENST00000608220 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
LINC00343-210ENST00000608220 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
LINC00343-210ENST00000608220 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
LINC00343-210ENST00000608220 ZSWIM6Q9HCJ5 1215 aa9.94□□□□□ -0.82
LINC00343-210ENST00000608220 ERBB3P21860 1342 aa9.93□□□□□ -0.82
LINC00343-210ENST00000608220 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
LINC00343-210ENST00000608220 HS3ST6Q96QI5 342 aa9.93□□□□□ -0.82
LINC00343-210ENST00000608220 GPR153Q6NV75 609 aa9.9□□□□□ -0.82
LINC00343-210ENST00000608220 BBXQ8WY36 941 aaPredicted RBP9.9□□□□□ -0.82
LINC00343-210ENST00000608220 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
LINC00343-210ENST00000608220 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00343-210ENST00000608220 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
LINC00343-210ENST00000608220 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
LINC00343-210ENST00000608220 PLPP6Q8IY26 295 aa9.88□□□□□ -0.83
LINC00343-210ENST00000608220 FOXK1P85037 733 aa9.87□□□□□ -0.83
LINC00343-210ENST00000608220 DSG2Q14126 1118 aa9.87□□□□□ -0.83
LINC00343-210ENST00000608220 VARS2Q5ST30 1063 aaKnown RBP9.86□□□□□ -0.83
LINC00343-210ENST00000608220 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
LINC00343-210ENST00000608220 PCDHGA4Q9Y5G9 962 aa9.85□□□□□ -0.83
LINC00343-210ENST00000608220 SLC34A2O95436 690 aa9.84□□□□□ -0.83
LINC00343-210ENST00000608220 NUDT7P0C024 238 aa9.84□□□□□ -0.83
LINC00343-210ENST00000608220 PDE4AP27815 886 aa9.84□□□□□ -0.83
LINC00343-210ENST00000608220 CRISPLD2Q9H0B8 497 aa9.83□□□□□ -0.84
LINC00343-210ENST00000608220 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
LINC00343-210ENST00000608220 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
LINC00343-210ENST00000608220 SPRYD3Q8NCJ5 442 aa9.81□□□□□ -0.84
LINC00343-210ENST00000608220 LARP6Q9BRS8 491 aaKnown RBP9.81□□□□□ -0.84
LINC00343-210ENST00000608220 ZNF316A6NFI3 1004 aaPredicted RBP9.8□□□□□ -0.84
LINC00343-210ENST00000608220 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
LINC00343-210ENST00000608220 TBC1D12O60347 775 aa9.78□□□□□ -0.84
LINC00343-210ENST00000608220 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
LINC00343-210ENST00000608220 PTCD2Q8WV60 388 aaKnown RBP9.78□□□□□ -0.84
LINC00343-210ENST00000608220 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC00343-210ENST00000608220 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
LINC00343-210ENST00000608220 DDX27Q96GQ7 796 aaKnown RBP9.77□□□□□ -0.85
LINC00343-210ENST00000608220 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
LINC00343-210ENST00000608220 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
LINC00343-210ENST00000608220 KRTAP3-2Q9BYR7 98 aa9.76□□□□□ -0.85
LINC00343-210ENST00000608220 ZNF687Q8N1G0 1237 aa9.75□□□□□ -0.85
LINC00343-210ENST00000608220 NISCHQ9Y2I1 1504 aa9.73□□□□□ -0.85
LINC00343-210ENST00000608220 SPNS2Q8IVW8 549 aa9.72□□□□□ -0.85
LINC00343-210ENST00000608220 OXER1Q8TDS5 423 aa9.71□□□□□ -0.86
LINC00343-210ENST00000608220 MFSD10Q14728 455 aa9.7□□□□□ -0.86
LINC00343-210ENST00000608220 PSDA5PKW4 1024 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-210ENST00000608220 KDM4FA0A1W2PPD8 638 aa9.67□□□□□ -0.86
LINC00343-210ENST00000608220 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
LINC00343-210ENST00000608220 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
LINC00343-210ENST00000608220 ANKRD13DQ6ZTN6 518 aa9.66□□□□□ -0.86
LINC00343-210ENST00000608220 AXIN2Q9Y2T1 843 aa9.65□□□□□ -0.86
LINC00343-210ENST00000608220 PPP4R3BQ5MIZ7 849 aa9.64□□□□□ -0.87
LINC00343-210ENST00000608220 EVI5O60447 810 aa9.63□□□□□ -0.87
LINC00343-210ENST00000608220 PBX2P40425 430 aa9.63□□□□□ -0.87
LINC00343-210ENST00000608220 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
LINC00343-210ENST00000608220 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
LINC00343-210ENST00000608220 ZNF454Q8N9F8 522 aa9.61□□□□□ -0.87
LINC00343-210ENST00000608220 POTEEQ6S8J3 1075 aa9.6□□□□□ -0.87
LINC00343-210ENST00000608220 ARHGAP33O14559 1287 aa9.59□□□□□ -0.87
LINC00343-210ENST00000608220 WDR70Q9NW82 654 aa9.59□□□□□ -0.87
LINC00343-210ENST00000608220 KCNH8Q96L42 1107 aa9.57□□□□□ -0.88
LINC00343-210ENST00000608220 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
LINC00343-210ENST00000608220 DPYSL4O14531 572 aa9.56□□□□□ -0.88
LINC00343-210ENST00000608220 PSEN2P49810 448 aa9.56□□□□□ -0.88
LINC00343-210ENST00000608220 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
LINC00343-210ENST00000608220 KCNK17Q96T54 332 aa9.56□□□□□ -0.88
LINC00343-210ENST00000608220 FOSBP53539 338 aa9.54□□□□□ -0.88
LINC00343-210ENST00000608220 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
LINC00343-210ENST00000608220 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
LINC00343-210ENST00000608220 JPH4Q96JJ6 628 aa9.53□□□□□ -0.88
LINC00343-210ENST00000608220 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
LINC00343-210ENST00000608220 PTGER2P43116 358 aa9.52□□□□□ -0.89
LINC00343-210ENST00000608220 E2F4Q16254 413 aa9.52□□□□□ -0.89
LINC00343-210ENST00000608220 RNF166Q96A37 237 aaPredicted RBP9.52□□□□□ -0.89
LINC00343-210ENST00000608220 ADGRD1Q6QNK2 874 aa9.51□□□□□ -0.89
LINC00343-210ENST00000608220 ZDHHC16Q969W1 377 aa9.51□□□□□ -0.89
LINC00343-210ENST00000608220 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
LINC00343-210ENST00000608220 PTPREP23469 700 aa9.49□□□□□ -0.89
LINC00343-210ENST00000608220 STAC3Q96MF2 364 aa9.48□□□□□ -0.89
LINC00343-210ENST00000608220 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
LINC00343-210ENST00000608220 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
LINC00343-210ENST00000608220 TK2O00142 265 aa9.46□□□□□ -0.9
LINC00343-210ENST00000608220 PHF14O94880 888 aa9.46□□□□□ -0.9
LINC00343-210ENST00000608220 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.9
LINC00343-210ENST00000608220 DDX12PQ92771 950 aa9.46□□□□□ -0.9
LINC00343-210ENST00000608220 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
LINC00343-210ENST00000608220 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
LINC00343-210ENST00000608220 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
LINC00343-210ENST00000608220 EPAS1Q99814 870 aa9.43□□□□□ -0.9
LINC00343-210ENST00000608220 VPS9D1Q9Y2B5 631 aa9.43□□□□□ -0.9
LINC00343-210ENST00000608220 PLCB2Q00722 1185 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms