RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 DOK7Q18PE1 504 aa15.46■□□□□ 0.07
LINC00458-206ENST00000607494 ZNF710Q8N1W2 664 aa15.46■□□□□ 0.07
LINC00458-206ENST00000607494 HS6ST3Q8IZP7 471 aa15.45■□□□□ 0.06
LINC00458-206ENST00000607494 HS3ST6Q96QI5 342 aa15.45■□□□□ 0.06
LINC00458-206ENST00000607494 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
LINC00458-206ENST00000607494 HOXB1P14653 301 aaPredicted RBP15.41■□□□□ 0.06
LINC00458-206ENST00000607494 C2orf72A6NCS6 295 aa15.37■□□□□ 0.05
LINC00458-206ENST00000607494 KIF3CO14782 793 aa15.35■□□□□ 0.05
LINC00458-206ENST00000607494 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
LINC00458-206ENST00000607494 NKX1-1Q15270 411 aaPredicted RBP15.33■□□□□ 0.04
LINC00458-206ENST00000607494 GPR153Q6NV75 609 aa15.31■□□□□ 0.04
LINC00458-206ENST00000607494 KRTAP3-3Q9BYR6 98 aa15.31■□□□□ 0.04
LINC00458-206ENST00000607494 KRTAP3-2Q9BYR7 98 aa15.31■□□□□ 0.04
LINC00458-206ENST00000607494 ERBB3P21860 1342 aa15.3■□□□□ 0.04
LINC00458-206ENST00000607494 KHSRPQ92945 711 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC00458-206ENST00000607494 ARSIQ5FYB1 569 aa15.28■□□□□ 0.04
LINC00458-206ENST00000607494 VARS2Q5ST30 1063 aaKnown RBP15.26■□□□□ 0.03
LINC00458-206ENST00000607494 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
LINC00458-206ENST00000607494 SPNS2Q8IVW8 549 aa15.25■□□□□ 0.03
LINC00458-206ENST00000607494 TMC2Q8TDI7 906 aa15.24■□□□□ 0.03
LINC00458-206ENST00000607494 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
LINC00458-206ENST00000607494 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
LINC00458-206ENST00000607494 MMRN1Q13201 1228 aa15.18■□□□□ 0.02
LINC00458-206ENST00000607494 NUDT7P0C024 238 aa15.14■□□□□ 0.01
LINC00458-206ENST00000607494 PCDHGA4Q9Y5G9 962 aa15.12■□□□□ 0.01
LINC00458-206ENST00000607494 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
LINC00458-206ENST00000607494 SLC34A2O95436 690 aa15.08■□□□□ 0
LINC00458-206ENST00000607494 DSG2Q14126 1118 aa15.08■□□□□ 0
LINC00458-206ENST00000607494 ZNF687Q8N1G0 1237 aa15.08■□□□□ 0
LINC00458-206ENST00000607494 PLPP6Q8IY26 295 aa15.07■□□□□ 0
LINC00458-206ENST00000607494 GPHNQ9NQX3 736 aaPredicted RBP15.07■□□□□ 0
LINC00458-206ENST00000607494 GTPBP6O43824 516 aaPredicted RBP15.06■□□□□ 0
LINC00458-206ENST00000607494 FOXK1P85037 733 aa15.06■□□□□ 0
LINC00458-206ENST00000607494 LHX6Q9UPM6 363 aa15.04■□□□□ -0
LINC00458-206ENST00000607494 RYDENQ9NUL5 291 aaKnown RBP15.01□□□□□ -0.01
LINC00458-206ENST00000607494 CRISPLD2Q9H0B8 497 aa14.98□□□□□ -0.01
LINC00458-206ENST00000607494 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
LINC00458-206ENST00000607494 PTCD2Q8WV60 388 aaKnown RBP14.96□□□□□ -0.01
LINC00458-206ENST00000607494 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
LINC00458-206ENST00000607494 POTEEQ6S8J3 1075 aa14.94□□□□□ -0.02
LINC00458-206ENST00000607494 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00458-206ENST00000607494 AXIN2Q9Y2T1 843 aa14.92□□□□□ -0.02
LINC00458-206ENST00000607494 PPP1R15BQ5SWA1 713 aa14.91□□□□□ -0.02
LINC00458-206ENST00000607494 ANKRD13DQ6ZTN6 518 aa14.9□□□□□ -0.02
LINC00458-206ENST00000607494 LSM11P83369 360 aaKnown RBP eCLIP14.87□□□□□ -0.03
LINC00458-206ENST00000607494 CADPS2Q86UW7 1296 aa14.86□□□□□ -0.03
LINC00458-206ENST00000607494 OXER1Q8TDS5 423 aa14.84□□□□□ -0.03
LINC00458-206ENST00000607494 RTN4Q9NQC3 1192 aaKnown RBP14.84□□□□□ -0.03
LINC00458-206ENST00000607494 LARP6Q9BRS8 491 aaKnown RBP14.83□□□□□ -0.04
LINC00458-206ENST00000607494 PDE4AP27815 886 aa14.82□□□□□ -0.04
LINC00458-206ENST00000607494 RNF166Q96A37 237 aaPredicted RBP14.82□□□□□ -0.04
LINC00458-206ENST00000607494 MYT1LQ9UL68 1186 aa14.81□□□□□ -0.04
LINC00458-206ENST00000607494 TBC1D12O60347 775 aa14.79□□□□□ -0.04
LINC00458-206ENST00000607494 PBX2P40425 430 aa14.79□□□□□ -0.04
LINC00458-206ENST00000607494 DDX27Q96GQ7 796 aaKnown RBP14.78□□□□□ -0.04
LINC00458-206ENST00000607494 PSEN2P49810 448 aa14.76□□□□□ -0.05
LINC00458-206ENST00000607494 AMER1Q5JTC6 1135 aaPredicted RBP14.76□□□□□ -0.05
LINC00458-206ENST00000607494 MFSD10Q14728 455 aa14.75□□□□□ -0.05
LINC00458-206ENST00000607494 PSDA5PKW4 1024 aaPredicted RBP14.74□□□□□ -0.05
LINC00458-206ENST00000607494 DMRTA1Q5VZB9 504 aa14.73□□□□□ -0.05
LINC00458-206ENST00000607494 ARHGAP33O14559 1287 aa14.72□□□□□ -0.05
LINC00458-206ENST00000607494 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
LINC00458-206ENST00000607494 BBXQ8WY36 941 aaPredicted RBP14.71□□□□□ -0.05
LINC00458-206ENST00000607494 EMILIN3Q9NT22 766 aa14.7□□□□□ -0.06
LINC00458-206ENST00000607494 ZNF454Q8N9F8 522 aa14.69□□□□□ -0.06
LINC00458-206ENST00000607494 PTGER2P43116 358 aa14.68□□□□□ -0.06
LINC00458-206ENST00000607494 ADGRD1Q6QNK2 874 aa14.67□□□□□ -0.06
LINC00458-206ENST00000607494 EVI5O60447 810 aa14.66□□□□□ -0.06
LINC00458-206ENST00000607494 KCNK17Q96T54 332 aa14.66□□□□□ -0.06
LINC00458-206ENST00000607494 FOSBP53539 338 aa14.62□□□□□ -0.07
LINC00458-206ENST00000607494 MAP3K9P80192 1104 aa14.61□□□□□ -0.07
LINC00458-206ENST00000607494 ANO8Q9HCE9 1232 aaPredicted RBP14.59□□□□□ -0.07
LINC00458-206ENST00000607494 HRO43593 1189 aa14.56□□□□□ -0.08
LINC00458-206ENST00000607494 SPRYD3Q8NCJ5 442 aa14.56□□□□□ -0.08
LINC00458-206ENST00000607494 JPH4Q96JJ6 628 aa14.56□□□□□ -0.08
LINC00458-206ENST00000607494 BCL2L12Q9HB09 334 aa14.56□□□□□ -0.08
LINC00458-206ENST00000607494 TK2O00142 265 aa14.55□□□□□ -0.08
LINC00458-206ENST00000607494 ADAM33Q9BZ11 813 aa14.55□□□□□ -0.08
LINC00458-206ENST00000607494 PAXIP1Q6ZW49 1069 aaPredicted RBP14.53□□□□□ -0.08
LINC00458-206ENST00000607494 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
LINC00458-206ENST00000607494 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
LINC00458-206ENST00000607494 DPYSL4O14531 572 aa14.52□□□□□ -0.09
LINC00458-206ENST00000607494 CAMK2BQ13554 666 aa14.52□□□□□ -0.09
LINC00458-206ENST00000607494 ZDHHC16Q969W1 377 aa14.51□□□□□ -0.09
LINC00458-206ENST00000607494 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
LINC00458-206ENST00000607494 VPS9D1Q9Y2B5 631 aa14.5□□□□□ -0.09
LINC00458-206ENST00000607494 PTPREP23469 700 aa14.49□□□□□ -0.09
LINC00458-206ENST00000607494 PCDHGA10Q9Y5H3 936 aa14.49□□□□□ -0.09
LINC00458-206ENST00000607494 KCTD12Q96CX2 325 aaKnown RBP14.44□□□□□ -0.1
LINC00458-206ENST00000607494 ZBED2Q9BTP6 218 aa14.44□□□□□ -0.1
LINC00458-206ENST00000607494 COL9A1P20849 921 aa14.39□□□□□ -0.11
LINC00458-206ENST00000607494 STAC3Q96MF2 364 aa14.39□□□□□ -0.11
LINC00458-206ENST00000607494 PHF14O94880 888 aa14.38□□□□□ -0.11
LINC00458-206ENST00000607494 TYW1BQ6NUM6 668 aa14.38□□□□□ -0.11
LINC00458-206ENST00000607494 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
LINC00458-206ENST00000607494 DDX12PQ92771 950 aa14.37□□□□□ -0.11
LINC00458-206ENST00000607494 HCSTQ9UBK5 93 aa14.37□□□□□ -0.11
LINC00458-206ENST00000607494 PROX2Q3B8N5 592 aa14.36□□□□□ -0.11
LINC00458-206ENST00000607494 BHMG1C9JSJ3 638 aaPredicted RBP14.35□□□□□ -0.11
LINC00458-206ENST00000607494 PPP1R3GB7ZBB8 358 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms