RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
UCHL3-205ENST00000607339 HOXB3P14651 431 aaPredicted RBP13.23□□□□□ -0.29
UCHL3-205ENST00000607339 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
UCHL3-205ENST00000607339 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
UCHL3-205ENST00000607339 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
UCHL3-205ENST00000607339 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
UCHL3-205ENST00000607339 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
UCHL3-205ENST00000607339 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
UCHL3-205ENST00000607339 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
UCHL3-205ENST00000607339 ERBB3P21860 1342 aa13.13□□□□□ -0.31
UCHL3-205ENST00000607339 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
UCHL3-205ENST00000607339 KIF3CO14782 793 aa13.07□□□□□ -0.32
UCHL3-205ENST00000607339 C2orf72A6NCS6 295 aa13.05□□□□□ -0.32
UCHL3-205ENST00000607339 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
UCHL3-205ENST00000607339 SLC34A2O95436 690 aa13.02□□□□□ -0.33
UCHL3-205ENST00000607339 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
UCHL3-205ENST00000607339 PPP1R37O75864 691 aa12.97□□□□□ -0.33
UCHL3-205ENST00000607339 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
UCHL3-205ENST00000607339 ZNF687Q8N1G0 1237 aa12.96□□□□□ -0.33
UCHL3-205ENST00000607339 KRTAP3-3Q9BYR6 98 aa12.96□□□□□ -0.33
UCHL3-205ENST00000607339 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.33
UCHL3-205ENST00000607339 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
UCHL3-205ENST00000607339 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
UCHL3-205ENST00000607339 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
UCHL3-205ENST00000607339 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
UCHL3-205ENST00000607339 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
UCHL3-205ENST00000607339 FOXK1P85037 733 aa12.92□□□□□ -0.34
UCHL3-205ENST00000607339 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
UCHL3-205ENST00000607339 PTGER2P43116 358 aa12.91□□□□□ -0.34
UCHL3-205ENST00000607339 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
UCHL3-205ENST00000607339 TBC1D12O60347 775 aa12.9□□□□□ -0.34
UCHL3-205ENST00000607339 PBX2P40425 430 aa12.88□□□□□ -0.35
UCHL3-205ENST00000607339 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
UCHL3-205ENST00000607339 NUDT7P0C024 238 aa12.85□□□□□ -0.35
UCHL3-205ENST00000607339 PLPP6Q8IY26 295 aa12.85□□□□□ -0.35
UCHL3-205ENST00000607339 PTCD2Q8WV60 388 aaKnown RBP12.85□□□□□ -0.35
UCHL3-205ENST00000607339 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.36
UCHL3-205ENST00000607339 PDE4AP27815 886 aa12.8□□□□□ -0.36
UCHL3-205ENST00000607339 DSG2Q14126 1118 aa12.79□□□□□ -0.36
UCHL3-205ENST00000607339 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
UCHL3-205ENST00000607339 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
UCHL3-205ENST00000607339 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
UCHL3-205ENST00000607339 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
UCHL3-205ENST00000607339 PPP1R15BQ5SWA1 713 aa12.75□□□□□ -0.37
UCHL3-205ENST00000607339 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
UCHL3-205ENST00000607339 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
UCHL3-205ENST00000607339 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
UCHL3-205ENST00000607339 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
UCHL3-205ENST00000607339 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
UCHL3-205ENST00000607339 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
UCHL3-205ENST00000607339 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
UCHL3-205ENST00000607339 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
UCHL3-205ENST00000607339 OXER1Q8TDS5 423 aa12.68□□□□□ -0.38
UCHL3-205ENST00000607339 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
UCHL3-205ENST00000607339 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
UCHL3-205ENST00000607339 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
UCHL3-205ENST00000607339 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
UCHL3-205ENST00000607339 TK2O00142 265 aa12.62□□□□□ -0.39
UCHL3-205ENST00000607339 MFSD10Q14728 455 aa12.62□□□□□ -0.39
UCHL3-205ENST00000607339 UPF1Q92900 1129 aaKnown RBP eCLIP12.62□□□□□ -0.39
UCHL3-205ENST00000607339 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
UCHL3-205ENST00000607339 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
UCHL3-205ENST00000607339 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
UCHL3-205ENST00000607339 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
UCHL3-205ENST00000607339 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
UCHL3-205ENST00000607339 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
UCHL3-205ENST00000607339 JPH4Q96JJ6 628 aa12.54□□□□□ -0.4
UCHL3-205ENST00000607339 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
UCHL3-205ENST00000607339 EVI5O60447 810 aa12.52□□□□□ -0.41
UCHL3-205ENST00000607339 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
UCHL3-205ENST00000607339 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
UCHL3-205ENST00000607339 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
UCHL3-205ENST00000607339 PTPREP23469 700 aa12.5□□□□□ -0.41
UCHL3-205ENST00000607339 FOSBP53539 338 aa12.5□□□□□ -0.41
UCHL3-205ENST00000607339 KCNK17Q96T54 332 aa12.5□□□□□ -0.41
UCHL3-205ENST00000607339 PSEN2P49810 448 aa12.47□□□□□ -0.41
UCHL3-205ENST00000607339 SLC4A5Q9BY07 1137 aa12.47□□□□□ -0.41
UCHL3-205ENST00000607339 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
UCHL3-205ENST00000607339 HCSTQ9UBK5 93 aa12.46□□□□□ -0.41
UCHL3-205ENST00000607339 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
UCHL3-205ENST00000607339 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
UCHL3-205ENST00000607339 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
UCHL3-205ENST00000607339 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
UCHL3-205ENST00000607339 HRO43593 1189 aa12.42□□□□□ -0.42
UCHL3-205ENST00000607339 CADPS2Q86UW7 1296 aa12.42□□□□□ -0.42
UCHL3-205ENST00000607339 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
UCHL3-205ENST00000607339 PHF14O94880 888 aa12.39□□□□□ -0.43
UCHL3-205ENST00000607339 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
UCHL3-205ENST00000607339 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
UCHL3-205ENST00000607339 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
UCHL3-205ENST00000607339 EPAS1Q99814 870 aa12.37□□□□□ -0.43
UCHL3-205ENST00000607339 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
UCHL3-205ENST00000607339 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
UCHL3-205ENST00000607339 GOLGA8CPA6NN73 597 aa12.34□□□□□ -0.43
UCHL3-205ENST00000607339 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
UCHL3-205ENST00000607339 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
UCHL3-205ENST00000607339 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
UCHL3-205ENST00000607339 PAXIP1Q6ZW49 1069 aaPredicted RBP12.32□□□□□ -0.44
UCHL3-205ENST00000607339 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
UCHL3-205ENST00000607339 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms