RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 UBTFP17480 764 aaKnown RBP30.67■■■□□ 2.5
NECAB3-220ENST00000606699 ATP1B4Q9UN42 357 aaPredicted RBP30.64■■■□□ 2.5
NECAB3-220ENST00000606699 HSPA2P54652 639 aa30.63■■■□□ 2.49
NECAB3-220ENST00000606699 MLECQ14165 292 aa30.62■■■□□ 2.49
NECAB3-220ENST00000606699 ATP10AO60312 1499 aa30.62■■■□□ 2.49
NECAB3-220ENST00000606699 PLPPR3Q6T4P5 718 aa30.6■■■□□ 2.49
NECAB3-220ENST00000606699 SIGLEC1Q9BZZ2 1709 aa30.59■■■□□ 2.49
NECAB3-220ENST00000606699 ARHGAP35Q9NRY4 1499 aa30.57■■■□□ 2.48
NECAB3-220ENST00000606699 C9orf84Q5VXU9 1444 aa30.56■■■□□ 2.48
NECAB3-220ENST00000606699 ARHGEF12Q9NZN5 1544 aa30.52■■■□□ 2.48
NECAB3-220ENST00000606699 ZNF518AQ6AHZ1 1483 aa30.52■■■□□ 2.48
NECAB3-220ENST00000606699 TROQ12816 1431 aaPredicted RBP30.52■■■□□ 2.48
NECAB3-220ENST00000606699 MYO5CQ9NQX4 1742 aa30.52■■■□□ 2.48
NECAB3-220ENST00000606699 EHMT2Q96KQ7 1210 aa30.51■■■□□ 2.47
NECAB3-220ENST00000606699 FER1L4A9Z1Z3 1794 aa30.51■■■□□ 2.47
NECAB3-220ENST00000606699 CLIP1P30622 1438 aa30.49■■■□□ 2.47
NECAB3-220ENST00000606699 KIF14Q15058 1648 aa30.47■■■□□ 2.47
NECAB3-220ENST00000606699 AFAP1Q8N556 730 aa30.47■■■□□ 2.47
NECAB3-220ENST00000606699 CERKQ8TCT0 537 aa30.46■■■□□ 2.47
NECAB3-220ENST00000606699 ARHGAP5Q13017 1502 aa30.44■■■□□ 2.46
NECAB3-220ENST00000606699 KDM5CP41229 1560 aa30.43■■■□□ 2.46
NECAB3-220ENST00000606699 CEBPAP49715 358 aaPredicted RBP30.4■■■□□ 2.46
NECAB3-220ENST00000606699 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
NECAB3-220ENST00000606699 MYT1LQ9UL68 1186 aa30.4■■■□□ 2.46
NECAB3-220ENST00000606699 DMRT2Q9Y5R5 561 aa30.39■■■□□ 2.46
NECAB3-220ENST00000606699 MLH3Q9UHC1 1453 aa30.36■■■□□ 2.45
NECAB3-220ENST00000606699 PREX1Q8TCU6 1659 aa30.36■■■□□ 2.45
NECAB3-220ENST00000606699 REREQ9P2R6 1566 aa30.35■■■□□ 2.45
NECAB3-220ENST00000606699 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
NECAB3-220ENST00000606699 UHRF1BP1Q6BDS2 1440 aa30.31■■■□□ 2.44
NECAB3-220ENST00000606699 DIP2CQ9Y2E4 1556 aa30.31■■■□□ 2.44
NECAB3-220ENST00000606699 CCDC18Q5T9S5 1454 aa30.31■■■□□ 2.44
NECAB3-220ENST00000606699 CASKIN1Q8WXD9 1431 aa30.3■■■□□ 2.44
NECAB3-220ENST00000606699 CDC42BPBQ9Y5S2 1711 aa30.28■■■□□ 2.44
NECAB3-220ENST00000606699 LRRIQ1Q96JM4 1722 aa30.27■■■□□ 2.44
NECAB3-220ENST00000606699 AGLP35573 1532 aa30.27■■■□□ 2.44
NECAB3-220ENST00000606699 ESF1Q9H501 851 aaKnown RBP30.27■■■□□ 2.44
NECAB3-220ENST00000606699 TRAPPC8Q9Y2L5 1435 aa30.26■■■□□ 2.43
NECAB3-220ENST00000606699 PREX2Q70Z35 1606 aa30.24■■■□□ 2.43
NECAB3-220ENST00000606699 ABCC1P33527 1531 aa30.23■■■□□ 2.43
NECAB3-220ENST00000606699 ABCA6Q8N139 1617 aa30.22■■■□□ 2.43
NECAB3-220ENST00000606699 STRCQ7RTU9 1775 aa30.19■■■□□ 2.42
NECAB3-220ENST00000606699 CNTLNQ9NXG0 1405 aa30.18■■■□□ 2.42
NECAB3-220ENST00000606699 PTPRTO14522 1441 aa30.17■■■□□ 2.42
NECAB3-220ENST00000606699 ITSN2Q9NZM3 1697 aa30.15■■■□□ 2.42
NECAB3-220ENST00000606699 FYCO1Q9BQS8 1478 aa30.14■■■□□ 2.42
NECAB3-220ENST00000606699 C3P01024 1663 aa30.14■■■□□ 2.41
NECAB3-220ENST00000606699 KIDINS220Q9ULH0 1771 aa30.12■■■□□ 2.41
NECAB3-220ENST00000606699 CDC42BPAQ5VT25 1732 aa30.09■■■□□ 2.41
NECAB3-220ENST00000606699 ZNF777Q9ULD5 760 aaPredicted RBP30.09■■■□□ 2.41
NECAB3-220ENST00000606699 SPAG9O60271 1321 aaKnown RBP30.07■■■□□ 2.4
NECAB3-220ENST00000606699 SAMD9LQ8IVG5 1584 aa30.07■■■□□ 2.4
NECAB3-220ENST00000606699 GPATCH8Q9UKJ3 1502 aaKnown RBP30.06■■■□□ 2.4
NECAB3-220ENST00000606699 NPATQ14207 1427 aa30.05■■■□□ 2.4
NECAB3-220ENST00000606699 HNRNPMP52272 730 aaKnown RBP eCLIP30.04■■■□□ 2.45e-11■■■□□ 16.7
NECAB3-220ENST00000606699 KIAA1107Q9UPP5 1409 aa30.04■■■□□ 2.4
NECAB3-220ENST00000606699 ZMYM3Q14202 1370 aa30.03■■■□□ 2.4
NECAB3-220ENST00000606699 NCOA1Q15788 1441 aa30.02■■■□□ 2.4
NECAB3-220ENST00000606699 PLEKHH2Q8IVE3 1493 aa30.01■■■□□ 2.4
NECAB3-220ENST00000606699 CFDP1Q9UEE9 299 aaPredicted RBP30.01■■■□□ 2.39
NECAB3-220ENST00000606699 SYCP2Q9BX26 1530 aa29.99■■■□□ 2.39
NECAB3-220ENST00000606699 MROH2AA6NES4 1674 aa29.97■■■□□ 2.39
NECAB3-220ENST00000606699 CCNB3Q8WWL7 1395 aa29.96■■■□□ 2.39
NECAB3-220ENST00000606699 IQSEC2Q5JU85 1478 aa29.95■■■□□ 2.39
NECAB3-220ENST00000606699 LTBP4Q8N2S1 1624 aa29.94■■■□□ 2.38
NECAB3-220ENST00000606699 PPP6R1Q9UPN7 881 aa29.94■■■□□ 2.38
NECAB3-220ENST00000606699 ATP7AQ04656 1500 aa29.93■■■□□ 2.38
NECAB3-220ENST00000606699 DISP3Q9P2K9 1392 aa29.92■■■□□ 2.38
NECAB3-220ENST00000606699 A2MP01023 1474 aa29.92■■■□□ 2.38
NECAB3-220ENST00000606699 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
NECAB3-220ENST00000606699 CAMSAP1Q5T5Y3 1602 aa29.89■■■□□ 2.38
NECAB3-220ENST00000606699 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
NECAB3-220ENST00000606699 SUPT6HQ7KZ85 1726 aaKnown RBP29.88■■■□□ 2.37
NECAB3-220ENST00000606699 INO80Q9ULG1 1556 aaPredicted RBP29.87■■■□□ 2.37
NECAB3-220ENST00000606699 PKD2Q13563 968 aa29.87■■■□□ 2.37
NECAB3-220ENST00000606699 GGT6Q6P531 493 aa29.87■■■□□ 2.37
NECAB3-220ENST00000606699 NCKAP5LQ9HCH0 1330 aa29.84■■■□□ 2.37
NECAB3-220ENST00000606699 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
NECAB3-220ENST00000606699 PLA2R1Q13018 1463 aa29.82■■■□□ 2.36
NECAB3-220ENST00000606699 ILDR2Q71H61 639 aa29.81■■■□□ 2.36
NECAB3-220ENST00000606699 CLTCQ00610 1675 aaKnown RBP29.8■■■□□ 2.36
NECAB3-220ENST00000606699 RTEL1-TNFRSF6BF6WH68 1400 aa29.79■■■□□ 2.36
NECAB3-220ENST00000606699 ZNF644Q9H582 1327 aaPredicted RBP29.77■■■□□ 2.36
NECAB3-220ENST00000606699 MBD5Q9P267 1494 aa29.77■■■□□ 2.36
NECAB3-220ENST00000606699 ZNF142P52746 1687 aaPredicted RBP29.76■■■□□ 2.36
NECAB3-220ENST00000606699 SOCS7O14512 581 aa29.76■■■□□ 2.35
NECAB3-220ENST00000606699 ZNF335Q9H4Z2 1342 aaPredicted RBP29.75■■■□□ 2.35
NECAB3-220ENST00000606699 TCOF1Q13428 1488 aaKnown RBP29.75■■■□□ 2.35
NECAB3-220ENST00000606699 ADGBQ8N7X0 1667 aa29.75■■■□□ 2.35
NECAB3-220ENST00000606699 DHX29Q7Z478 1369 aaKnown RBP29.75■■■□□ 2.35
NECAB3-220ENST00000606699 CEP170BQ9Y4F5 1589 aaPredicted RBP29.74■■■□□ 2.35
NECAB3-220ENST00000606699 MYO3AQ8NEV4 1616 aa29.74■■■□□ 2.35
NECAB3-220ENST00000606699 CEP162Q5TB80 1403 aa29.73■■■□□ 2.35
NECAB3-220ENST00000606699 TIAM1Q13009 1591 aa29.73■■■□□ 2.35
NECAB3-220ENST00000606699 EHBP1L1Q8N3D4 1523 aa29.71■■■□□ 2.35
NECAB3-220ENST00000606699 RSPH4AQ5TD94 716 aa29.7■■■□□ 2.35
NECAB3-220ENST00000606699 UBAP1LF5GYI3 381 aa29.68■■■□□ 2.34
NECAB3-220ENST00000606699 A2ML1A8K2U0 1454 aa29.68■■■□□ 2.34
NECAB3-220ENST00000606699 SPATA31D1Q6ZQQ2 1576 aa29.67■■■□□ 2.34
NECAB3-220ENST00000606699 KIF3BO15066 747 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms