RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 HS6ST3Q8IZP7 471 aa17.01■□□□□ 0.31
CSNK1A1-209ENST00000606299 FBXO22Q8NEZ5 403 aa17■□□□□ 0.31
CSNK1A1-209ENST00000606299 MFRPQ9BY79 579 aa16.98■□□□□ 0.31
CSNK1A1-209ENST00000606299 MICALL2Q8IY33 904 aa16.94■□□□□ 0.3
CSNK1A1-209ENST00000606299 SNPHO15079 494 aa16.93■□□□□ 0.3
CSNK1A1-209ENST00000606299 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
CSNK1A1-209ENST00000606299 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
CSNK1A1-209ENST00000606299 LCE2DQ5TA82 110 aaPredicted RBP16.89■□□□□ 0.29
CSNK1A1-209ENST00000606299 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
CSNK1A1-209ENST00000606299 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
CSNK1A1-209ENST00000606299 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
CSNK1A1-209ENST00000606299 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-209ENST00000606299 POTEMA6NI47 508 aa16.83■□□□□ 0.28
CSNK1A1-209ENST00000606299 POTEGQ6S5H5 508 aa16.82■□□□□ 0.28
CSNK1A1-209ENST00000606299 AMER1Q5JTC6 1135 aaPredicted RBP16.79■□□□□ 0.28
CSNK1A1-209ENST00000606299 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
CSNK1A1-209ENST00000606299 ST18O60284 1047 aa16.77■□□□□ 0.28
CSNK1A1-209ENST00000606299 RYDENQ9NUL5 291 aaKnown RBP16.74■□□□□ 0.27
CSNK1A1-209ENST00000606299 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
CSNK1A1-209ENST00000606299 TMEM92Q6UXU6 159 aa16.73■□□□□ 0.27
CSNK1A1-209ENST00000606299 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
CSNK1A1-209ENST00000606299 NKX1-1Q15270 411 aaPredicted RBP16.69■□□□□ 0.26
CSNK1A1-209ENST00000606299 PPP1R37O75864 691 aa16.66■□□□□ 0.26
CSNK1A1-209ENST00000606299 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
CSNK1A1-209ENST00000606299 HOXB3P14651 431 aaPredicted RBP16.65■□□□□ 0.26
CSNK1A1-209ENST00000606299 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
CSNK1A1-209ENST00000606299 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
CSNK1A1-209ENST00000606299 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
CSNK1A1-209ENST00000606299 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
CSNK1A1-209ENST00000606299 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
CSNK1A1-209ENST00000606299 KIF3CO14782 793 aa16.59■□□□□ 0.25
CSNK1A1-209ENST00000606299 RIMBP2O15034 1052 aa16.59■□□□□ 0.25
CSNK1A1-209ENST00000606299 ZNF710Q8N1W2 664 aa16.59■□□□□ 0.25
CSNK1A1-209ENST00000606299 NCAPD3P42695 1498 aa16.55■□□□□ 0.24
CSNK1A1-209ENST00000606299 C2orf72A6NCS6 295 aa16.55■□□□□ 0.24
CSNK1A1-209ENST00000606299 TMC2Q8TDI7 906 aa16.55■□□□□ 0.24
CSNK1A1-209ENST00000606299 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
CSNK1A1-209ENST00000606299 EMP3P54852 163 aa16.53■□□□□ 0.24
CSNK1A1-209ENST00000606299 MARVELD3Q96A59 401 aa16.53■□□□□ 0.24
CSNK1A1-209ENST00000606299 HOXB1P14653 301 aaPredicted RBP16.52■□□□□ 0.24
CSNK1A1-209ENST00000606299 GTPBP6O43824 516 aaPredicted RBP16.49■□□□□ 0.23
CSNK1A1-209ENST00000606299 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
CSNK1A1-209ENST00000606299 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
CSNK1A1-209ENST00000606299 GPHNQ9NQX3 736 aaPredicted RBP16.42■□□□□ 0.22
CSNK1A1-209ENST00000606299 SLC34A2O95436 690 aa16.4■□□□□ 0.22
CSNK1A1-209ENST00000606299 GPR153Q6NV75 609 aa16.4■□□□□ 0.22
CSNK1A1-209ENST00000606299 BBXQ8WY36 941 aaPredicted RBP16.4■□□□□ 0.22
CSNK1A1-209ENST00000606299 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
CSNK1A1-209ENST00000606299 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
CSNK1A1-209ENST00000606299 FOXK1P85037 733 aa16.37■□□□□ 0.21
CSNK1A1-209ENST00000606299 HS3ST6Q96QI5 342 aa16.37■□□□□ 0.21
CSNK1A1-209ENST00000606299 CRISPLD2Q9H0B8 497 aa16.33■□□□□ 0.2
CSNK1A1-209ENST00000606299 ERBB3P21860 1342 aa16.31■□□□□ 0.2
CSNK1A1-209ENST00000606299 ARSIQ5FYB1 569 aa16.31■□□□□ 0.2
CSNK1A1-209ENST00000606299 PLPP6Q8IY26 295 aa16.3■□□□□ 0.2
CSNK1A1-209ENST00000606299 DSG2Q14126 1118 aa16.29■□□□□ 0.2
CSNK1A1-209ENST00000606299 POTEB3A0JP26 581 aa16.28■□□□□ 0.2
CSNK1A1-209ENST00000606299 POTEBQ6S5H4 581 aa16.28■□□□□ 0.2
CSNK1A1-209ENST00000606299 PCDHGA4Q9Y5G9 962 aa16.27■□□□□ 0.2
CSNK1A1-209ENST00000606299 PDE4AP27815 886 aa16.26■□□□□ 0.19
CSNK1A1-209ENST00000606299 PLSCR2Q9NRY7 297 aa16.26■□□□□ 0.19
CSNK1A1-209ENST00000606299 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
CSNK1A1-209ENST00000606299 NCKAP5LQ9HCH0 1330 aa16.24■□□□□ 0.19
CSNK1A1-209ENST00000606299 PTCD2Q8WV60 388 aaKnown RBP16.24■□□□□ 0.19
CSNK1A1-209ENST00000606299 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
CSNK1A1-209ENST00000606299 PPP1R15BQ5SWA1 713 aa16.21■□□□□ 0.19
CSNK1A1-209ENST00000606299 KHSRPQ92945 711 aaKnown RBP eCLIP16.21■□□□□ 0.195e-9■□□□□ 11.3
CSNK1A1-209ENST00000606299 CFTRP13569 1480 aa16.21■□□□□ 0.19
CSNK1A1-209ENST00000606299 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
CSNK1A1-209ENST00000606299 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
CSNK1A1-209ENST00000606299 NUDT7P0C024 238 aa16.18■□□□□ 0.18
CSNK1A1-209ENST00000606299 SPRYD3Q8NCJ5 442 aa16.18■□□□□ 0.18
CSNK1A1-209ENST00000606299 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
CSNK1A1-209ENST00000606299 BIVM-ERCC5R4GMW8 1640 aa16.16■□□□□ 0.18
CSNK1A1-209ENST00000606299 MFSD10Q14728 455 aa16.16■□□□□ 0.18
CSNK1A1-209ENST00000606299 TBC1D12O60347 775 aa16.15■□□□□ 0.18
CSNK1A1-209ENST00000606299 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
CSNK1A1-209ENST00000606299 KRTAP3-3Q9BYR6 98 aa16.15■□□□□ 0.18
CSNK1A1-209ENST00000606299 KRTAP3-2Q9BYR7 98 aa16.15■□□□□ 0.18
CSNK1A1-209ENST00000606299 LARP6Q9BRS8 491 aaKnown RBP16.14■□□□□ 0.17
CSNK1A1-209ENST00000606299 ZNF687Q8N1G0 1237 aa16.13■□□□□ 0.17
CSNK1A1-209ENST00000606299 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
CSNK1A1-209ENST00000606299 CADPS2Q86UW7 1296 aa16.12■□□□□ 0.17
CSNK1A1-209ENST00000606299 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
CSNK1A1-209ENST00000606299 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
CSNK1A1-209ENST00000606299 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
CSNK1A1-209ENST00000606299 KDM4FA0A1W2PPD8 638 aa16.1■□□□□ 0.17
CSNK1A1-209ENST00000606299 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
CSNK1A1-209ENST00000606299 LHX6Q9UPM6 363 aa16.09■□□□□ 0.17
CSNK1A1-209ENST00000606299 NESP48681 1621 aa16.08■□□□□ 0.17
CSNK1A1-209ENST00000606299 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-209ENST00000606299 KIF21AQ7Z4S6 1674 aa16.06■□□□□ 0.16
CSNK1A1-209ENST00000606299 CUX1P39880 1505 aa16.05■□□□□ 0.16
CSNK1A1-209ENST00000606299 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
CSNK1A1-209ENST00000606299 SPNS2Q8IVW8 549 aa16.03■□□□□ 0.16
CSNK1A1-209ENST00000606299 UPF1Q92900 1129 aaKnown RBP eCLIP16.03■□□□□ 0.16
CSNK1A1-209ENST00000606299 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
CSNK1A1-209ENST00000606299 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
CSNK1A1-209ENST00000606299 PBX2P40425 430 aa16.01■□□□□ 0.15
CSNK1A1-209ENST00000606299 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms