RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 ABCC5O15440 1437 aa28.27■■■□□ 2.12
TUBB4B-202ENST00000604929 CDC42BPAQ5VT25 1732 aa28.27■■■□□ 2.12
TUBB4B-202ENST00000604929 CLSPNQ9HAW4 1339 aa28.25■■■□□ 2.11
TUBB4B-202ENST00000604929 DNMT1P26358 1616 aaKnown RBP28.2■■■□□ 2.11
TUBB4B-202ENST00000604929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.19■■■□□ 2.11e-6■■□□□ 12.6
TUBB4B-202ENST00000604929 HNRNPMP52272 730 aaKnown RBP eCLIP28.18■■■□□ 2.1
TUBB4B-202ENST00000604929 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
TUBB4B-202ENST00000604929 CDC42BPBQ9Y5S2 1711 aa28.13■■■□□ 2.09
TUBB4B-202ENST00000604929 NPM1P06748 294 aaKnown RBP eCLIP28.13■■■□□ 2.09
TUBB4B-202ENST00000604929 AKNAQ7Z591 1439 aa28.12■■■□□ 2.09
TUBB4B-202ENST00000604929 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
TUBB4B-202ENST00000604929 TRIM52Q96A61 297 aa28.11■■■□□ 2.09
TUBB4B-202ENST00000604929 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
TUBB4B-202ENST00000604929 PREX2Q70Z35 1606 aa28.09■■■□□ 2.09
TUBB4B-202ENST00000604929 ARHGAP5Q13017 1502 aa28.09■■■□□ 2.09
TUBB4B-202ENST00000604929 KDM6BO15054 1643 aa28.08■■■□□ 2.09
TUBB4B-202ENST00000604929 TSPY4P0CV99 314 aa28.08■■■□□ 2.08
TUBB4B-202ENST00000604929 TSPY10P0CW01 314 aa28.08■■■□□ 2.08
TUBB4B-202ENST00000604929 SIN3AQ96ST3 1273 aa28.07■■■□□ 2.08
TUBB4B-202ENST00000604929 GCC2Q8IWJ2 1684 aa28.06■■■□□ 2.08
TUBB4B-202ENST00000604929 WDR7Q9Y4E6 1490 aa28.05■■■□□ 2.08
TUBB4B-202ENST00000604929 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
TUBB4B-202ENST00000604929 SAMD9LQ8IVG5 1584 aa28.05■■■□□ 2.08
TUBB4B-202ENST00000604929 NCOA1Q15788 1441 aa28.04■■■□□ 2.08
TUBB4B-202ENST00000604929 CYB5RLQ6IPT4 315 aa28.04■■■□□ 2.08
TUBB4B-202ENST00000604929 ASXL2Q76L83 1435 aa28.03■■■□□ 2.08
TUBB4B-202ENST00000604929 MYO5CQ9NQX4 1742 aa28.03■■■□□ 2.08
TUBB4B-202ENST00000604929 PLCH2O75038 1416 aa28.02■■■□□ 2.08
TUBB4B-202ENST00000604929 MBD5Q9P267 1494 aa28.02■■■□□ 2.08
TUBB4B-202ENST00000604929 EFCAB2Q5VUJ9 269 aa28.01■■■□□ 2.07
TUBB4B-202ENST00000604929 ANKRD30AQ9BXX3 1397 aa28■■■□□ 2.07
TUBB4B-202ENST00000604929 C9orf84Q5VXU9 1444 aa27.99■■■□□ 2.07
TUBB4B-202ENST00000604929 CROCC2H7BZ55 1655 aa27.98■■■□□ 2.07
TUBB4B-202ENST00000604929 RSPH4AQ5TD94 716 aa27.97■■■□□ 2.07
TUBB4B-202ENST00000604929 SYCP2Q9BX26 1530 aa27.95■■■□□ 2.07
TUBB4B-202ENST00000604929 ADGRL2O95490 1459 aa27.95■■■□□ 2.06
TUBB4B-202ENST00000604929 ADGBQ8N7X0 1667 aa27.94■■■□□ 2.06
TUBB4B-202ENST00000604929 MPHOSPH9Q99550 1183 aa27.94■■■□□ 2.06
TUBB4B-202ENST00000604929 ARHGEF5Q12774 1597 aa27.93■■■□□ 2.06
TUBB4B-202ENST00000604929 CCDC141Q6ZP82 1450 aa27.93■■■□□ 2.06
TUBB4B-202ENST00000604929 SHANK2Q9UPX8 1470 aa27.91■■■□□ 2.06
TUBB4B-202ENST00000604929 ARHGEF12Q9NZN5 1544 aa27.89■■■□□ 2.06
TUBB4B-202ENST00000604929 KIAA1107Q9UPP5 1409 aa27.89■■■□□ 2.05
TUBB4B-202ENST00000604929 FOXD1Q16676 465 aa27.88■■■□□ 2.05
TUBB4B-202ENST00000604929 ANKRD50Q9ULJ7 1429 aa27.87■■■□□ 2.05
TUBB4B-202ENST00000604929 RIMBP3CA6NJZ7 1639 aa27.87■■■□□ 2.05
TUBB4B-202ENST00000604929 RIMBP3BA6NNM3 1639 aa27.87■■■□□ 2.05
TUBB4B-202ENST00000604929 RIMBP3Q9UFD9 1639 aa27.87■■■□□ 2.05
TUBB4B-202ENST00000604929 PLEKHH2Q8IVE3 1493 aa27.87■■■□□ 2.05
TUBB4B-202ENST00000604929 KIF15Q9NS87 1388 aa27.85■■■□□ 2.05
TUBB4B-202ENST00000604929 DENND4BO75064 1496 aaPredicted RBP27.84■■■□□ 2.05
TUBB4B-202ENST00000604929 SLC4A1APQ9BWU0 796 aaKnown RBP27.84■■■□□ 2.05
TUBB4B-202ENST00000604929 ABCA9Q8IUA7 1624 aa27.83■■■□□ 2.05
TUBB4B-202ENST00000604929 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
TUBB4B-202ENST00000604929 AFAP1Q8N556 730 aa27.82■■■□□ 2.04
TUBB4B-202ENST00000604929 ZNF316A6NFI3 1004 aaPredicted RBP27.8■■■□□ 2.04
TUBB4B-202ENST00000604929 TRAPPC8Q9Y2L5 1435 aa27.8■■■□□ 2.04
TUBB4B-202ENST00000604929 FANCAO15360 1455 aa27.8■■■□□ 2.04
TUBB4B-202ENST00000604929 ABCC1P33527 1531 aa27.78■■■□□ 2.04
TUBB4B-202ENST00000604929 ARAP3Q8WWN8 1544 aa27.77■■■□□ 2.04
TUBB4B-202ENST00000604929 TIMELESSQ9UNS1 1208 aa27.74■■■□□ 2.03
TUBB4B-202ENST00000604929 CD109Q6YHK3 1445 aa27.73■■■□□ 2.03
TUBB4B-202ENST00000604929 NUP155O75694 1391 aa27.73■■■□□ 2.03
TUBB4B-202ENST00000604929 PZPP20742 1482 aa27.71■■■□□ 2.03
TUBB4B-202ENST00000604929 SPAG9O60271 1321 aaKnown RBP27.71■■■□□ 2.03
TUBB4B-202ENST00000604929 MAST1Q9Y2H9 1570 aa27.71■■■□□ 2.03
TUBB4B-202ENST00000604929 TONSLQ96HA7 1378 aa27.71■■■□□ 2.03
TUBB4B-202ENST00000604929 SCAPERQ9BY12 1400 aa27.7■■■□□ 2.02
TUBB4B-202ENST00000604929 ADGRL1O94910 1474 aa27.69■■■□□ 2.02
TUBB4B-202ENST00000604929 MYT1LQ9UL68 1186 aa27.68■■■□□ 2.02
TUBB4B-202ENST00000604929 PPP1R15AO75807 674 aaPredicted RBP27.68■■■□□ 2.02
TUBB4B-202ENST00000604929 PKD2Q13563 968 aa27.68■■■□□ 2.02
TUBB4B-202ENST00000604929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.65■■■□□ 2.02
TUBB4B-202ENST00000604929 ANKRD30BQ9BXX2 1392 aa27.65■■■□□ 2.02
TUBB4B-202ENST00000604929 PLXNC1O60486 1568 aa27.61■■■□□ 2.01
TUBB4B-202ENST00000604929 DIEXFQ68CQ4 756 aaKnown RBP27.6■■■□□ 2.01
TUBB4B-202ENST00000604929 DUOX2Q9NRD8 1548 aa27.58■■■□□ 2.01
TUBB4B-202ENST00000604929 RTEL1-TNFRSF6BF6WH68 1400 aa27.58■■■□□ 2.01
TUBB4B-202ENST00000604929 FAM69CQ0P6D2 419 aa27.57■■■□□ 2
TUBB4B-202ENST00000604929 ZFYVE16Q7Z3T8 1539 aa27.54■■■□□ 2
TUBB4B-202ENST00000604929 L3MBTL2Q969R5 705 aa27.53■■■□□ 2
TUBB4B-202ENST00000604929 KDM5DQ9BY66 1539 aa27.51■■□□□ 1.99
TUBB4B-202ENST00000604929 ERBINQ96RT1 1412 aa27.51■■□□□ 1.99
TUBB4B-202ENST00000604929 ATP7AQ04656 1500 aa27.5■■□□□ 1.99
TUBB4B-202ENST00000604929 RPRD2Q5VT52 1461 aaKnown RBP27.49■■□□□ 1.99
TUBB4B-202ENST00000604929 RAPGEF3O95398 923 aa27.49■■□□□ 1.99
TUBB4B-202ENST00000604929 FAM135AQ9P2D6 1515 aa27.49■■□□□ 1.99
TUBB4B-202ENST00000604929 ZNF518AQ6AHZ1 1483 aa27.47■■□□□ 1.99
TUBB4B-202ENST00000604929 CFAP74Q9C0B2 1584 aa27.46■■□□□ 1.99
TUBB4B-202ENST00000604929 INO80Q9ULG1 1556 aaPredicted RBP27.45■■□□□ 1.99
TUBB4B-202ENST00000604929 KIF3BO15066 747 aa27.43■■□□□ 1.98
TUBB4B-202ENST00000604929 MAP3K4Q9Y6R4 1608 aa27.43■■□□□ 1.98
TUBB4B-202ENST00000604929 UNC13BO14795 1591 aa27.43■■□□□ 1.98
TUBB4B-202ENST00000604929 NEO1Q92859 1461 aa27.43■■□□□ 1.98
TUBB4B-202ENST00000604929 POGZQ7Z3K3 1410 aa27.43■■□□□ 1.98
TUBB4B-202ENST00000604929 HIRIP3Q9BW71 556 aaPredicted RBP27.41■■□□□ 1.98
TUBB4B-202ENST00000604929 GLI2P10070 1586 aa27.41■■□□□ 1.98
TUBB4B-202ENST00000604929 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
TUBB4B-202ENST00000604929 KIDINS220Q9ULH0 1771 aa27.39■■□□□ 1.98
TUBB4B-202ENST00000604929 DIP2BQ9P265 1576 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms