RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ARHGEF5Q12774 1597 aa18.42■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 WDR7Q9Y4E6 1490 aa18.42■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 HFM1A2PYH4 1435 aa18.41■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.54
NEDD8-MDP1-203ENST00000604306 CLSPNQ9HAW4 1339 aa18.38■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 ROCK1Q13464 1354 aa18.38■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 DAPK1P53355 1430 aa18.38■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 SAMD9LQ8IVG5 1584 aa18.36■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
NEDD8-MDP1-203ENST00000604306 MAST1Q9Y2H9 1570 aa18.33■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 ABCC5O15440 1437 aa18.32■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 PLCH2O75038 1416 aa18.32■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 ARHGAP5Q13017 1502 aa18.32■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 NAIPQ13075 1403 aa18.32■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 CFAP74Q9C0B2 1584 aa18.31■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 RSPH4AQ5TD94 716 aa18.29■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 NPM1P06748 294 aaKnown RBP eCLIP18.28■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 ABCC1P33527 1531 aa18.28■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 MBD5Q9P267 1494 aa18.27■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 ITGAEP38570 1179 aa18.27■□□□□ 0.52
NEDD8-MDP1-203ENST00000604306 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
NEDD8-MDP1-203ENST00000604306 GLI2P10070 1586 aa18.24■□□□□ 0.51
NEDD8-MDP1-203ENST00000604306 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
NEDD8-MDP1-203ENST00000604306 ZNF644Q9H582 1327 aaPredicted RBP18.22■□□□□ 0.51
NEDD8-MDP1-203ENST00000604306 NCOA1Q15788 1441 aa18.21■□□□□ 0.51
NEDD8-MDP1-203ENST00000604306 ANKRD30AQ9BXX3 1397 aa18.2■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 MAP3K4Q9Y6R4 1608 aa18.2■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 EFCAB2Q5VUJ9 269 aa18.19■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 FANCAO15360 1455 aa18.17■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 KDM6BO15054 1643 aa18.15■□□□□ 0.5
NEDD8-MDP1-203ENST00000604306 TSPY4P0CV99 314 aa18.13■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 TSPY10P0CW01 314 aa18.13■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 RTEL1-TNFRSF6BF6WH68 1400 aa18.13■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 KDM5DQ9BY66 1539 aa18.13■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 ARHGEF12Q9NZN5 1544 aa18.13■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 DIP2BQ9P265 1576 aa18.13■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 NEO1Q92859 1461 aa18.12■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 ZFYVE16Q7Z3T8 1539 aa18.09■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 DUOX2Q9NRD8 1548 aa18.09■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 UNC13BO14795 1591 aa18.08■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 ANKRD50Q9ULJ7 1429 aa18.08■□□□□ 0.49
NEDD8-MDP1-203ENST00000604306 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 RRP7BPQ9NSQ0 103 aa18.08■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 CHIC2Q9UKJ5 165 aa18.08■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 KDM5CP41229 1560 aa18.08■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 EIF2AK4Q9P2K8 1649 aaKnown RBP18.06■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 HNRNPMP52272 730 aaKnown RBP eCLIP18.06■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 ZNF518AQ6AHZ1 1483 aa18.06■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 TRAPPC8Q9Y2L5 1435 aa18.03■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 MAGI2Q86UL8 1455 aa18.02■□□□□ 0.48
NEDD8-MDP1-203ENST00000604306 RICTORQ6R327 1708 aa18.01■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 PPRC1Q5VV67 1664 aaKnown RBP18.01■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 KIDINS220Q9ULH0 1771 aa18.01■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 HECW2Q9P2P5 1572 aa18■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 POGZQ7Z3K3 1410 aa18■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 IQGAP3Q86VI3 1631 aa18■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 TEX14Q8IWB6 1497 aa18■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 PZPP20742 1482 aa17.99■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
NEDD8-MDP1-203ENST00000604306 SPAG9O60271 1321 aaKnown RBP17.96■□□□□ 0.46
NEDD8-MDP1-203ENST00000604306 ZMYM4Q5VZL5 1548 aa17.94■□□□□ 0.46
NEDD8-MDP1-203ENST00000604306 MPHOSPH9Q99550 1183 aa17.92■□□□□ 0.46
NEDD8-MDP1-203ENST00000604306 FAM135AQ9P2D6 1515 aa17.92■□□□□ 0.46
NEDD8-MDP1-203ENST00000604306 RNF17Q9BXT8 1623 aaKnown RBP17.91■□□□□ 0.46
NEDD8-MDP1-203ENST00000604306 TSPOAP1O95153 1857 aa17.91■□□□□ 0.46
NEDD8-MDP1-203ENST00000604306 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
NEDD8-MDP1-203ENST00000604306 PRDM15P57071 1507 aaPredicted RBP17.89■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 FRMPD1Q5SYB0 1578 aa17.89■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 VWDEQ8N2E2 1590 aa17.89■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 TET3O43151 1660 aa17.87■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms