RNA–Protein interactions for RNA: ENST00000602475.5

UBE2E3-205, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3 BASIC

Gene UBE2E3, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-205ENST00000602475 PREX1Q8TCU6 1659 aa25.82■■□□□ 1.72
UBE2E3-205ENST00000602475 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
UBE2E3-205ENST00000602475 CDK13Q14004 1512 aaKnown RBP25.8■■□□□ 1.72
UBE2E3-205ENST00000602475 MYO5CQ9NQX4 1742 aa25.77■■□□□ 1.72
UBE2E3-205ENST00000602475 C9orf84Q5VXU9 1444 aa25.76■■□□□ 1.71
UBE2E3-205ENST00000602475 ARHGEF12Q9NZN5 1544 aa25.75■■□□□ 1.71
UBE2E3-205ENST00000602475 ATP10AO60312 1499 aa25.75■■□□□ 1.71
UBE2E3-205ENST00000602475 PLCH2O75038 1416 aa25.75■■□□□ 1.71
UBE2E3-205ENST00000602475 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.7
UBE2E3-205ENST00000602475 EFCAB2Q5VUJ9 269 aa25.69■■□□□ 1.7
UBE2E3-205ENST00000602475 CEBPAP49715 358 aaPredicted RBP25.67■■□□□ 1.7
UBE2E3-205ENST00000602475 DMRT2Q9Y5R5 561 aa25.67■■□□□ 1.7
UBE2E3-205ENST00000602475 DISP3Q9P2K9 1392 aa25.67■■□□□ 1.7
UBE2E3-205ENST00000602475 MYT1LQ9UL68 1186 aa25.66■■□□□ 1.7
UBE2E3-205ENST00000602475 STRCQ7RTU9 1775 aa25.66■■□□□ 1.7
UBE2E3-205ENST00000602475 SETD1BQ9UPS6 1966 aaKnown RBP25.65■■□□□ 1.7
UBE2E3-205ENST00000602475 UHRF1BP1Q6BDS2 1440 aa25.65■■□□□ 1.7
UBE2E3-205ENST00000602475 KIF14Q15058 1648 aa25.64■■□□□ 1.7
UBE2E3-205ENST00000602475 ZNF518AQ6AHZ1 1483 aa25.64■■□□□ 1.69
UBE2E3-205ENST00000602475 CDK11AQ9UQ88 783 aaPredicted RBP25.63■■□□□ 1.69
UBE2E3-205ENST00000602475 ARHGAP5Q13017 1502 aa25.62■■□□□ 1.69
UBE2E3-205ENST00000602475 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
UBE2E3-205ENST00000602475 KDM5CP41229 1560 aa25.58■■□□□ 1.69
UBE2E3-205ENST00000602475 DIP2CQ9Y2E4 1556 aa25.56■■□□□ 1.68
UBE2E3-205ENST00000602475 CLIP1P30622 1438 aa25.55■■□□□ 1.68
UBE2E3-205ENST00000602475 C3P01024 1663 aa25.55■■□□□ 1.68
UBE2E3-205ENST00000602475 AFAP1Q8N556 730 aa25.54■■□□□ 1.68
UBE2E3-205ENST00000602475 ESF1Q9H501 851 aaKnown RBP25.54■■□□□ 1.68
UBE2E3-205ENST00000602475 ILDR2Q71H61 639 aa25.53■■□□□ 1.68
UBE2E3-205ENST00000602475 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
UBE2E3-205ENST00000602475 TROQ12816 1431 aaPredicted RBP25.53■■□□□ 1.68
UBE2E3-205ENST00000602475 REREQ9P2R6 1566 aa25.52■■□□□ 1.68
UBE2E3-205ENST00000602475 UBTFP17480 764 aaKnown RBP25.52■■□□□ 1.68
UBE2E3-205ENST00000602475 SPATA31D1Q6ZQQ2 1576 aa25.52■■□□□ 1.68
UBE2E3-205ENST00000602475 ABCA6Q8N139 1617 aa25.52■■□□□ 1.68
UBE2E3-205ENST00000602475 SOCS7O14512 581 aa25.51■■□□□ 1.67
UBE2E3-205ENST00000602475 CDC42BPBQ9Y5S2 1711 aa25.49■■□□□ 1.67
UBE2E3-205ENST00000602475 PTPRTO14522 1441 aa25.49■■□□□ 1.67
UBE2E3-205ENST00000602475 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
UBE2E3-205ENST00000602475 LRRIQ1Q96JM4 1722 aa25.46■■□□□ 1.67
UBE2E3-205ENST00000602475 MLH3Q9UHC1 1453 aa25.45■■□□□ 1.66
UBE2E3-205ENST00000602475 PREX2Q70Z35 1606 aa25.45■■□□□ 1.66
UBE2E3-205ENST00000602475 ITSN2Q9NZM3 1697 aa25.44■■□□□ 1.66
UBE2E3-205ENST00000602475 AGLP35573 1532 aa25.43■■□□□ 1.66
UBE2E3-205ENST00000602475 TRAPPC8Q9Y2L5 1435 aa25.42■■□□□ 1.66
UBE2E3-205ENST00000602475 ABCC1P33527 1531 aa25.42■■□□□ 1.66
UBE2E3-205ENST00000602475 CNTLNQ9NXG0 1405 aa25.38■■□□□ 1.65
UBE2E3-205ENST00000602475 LTBP4Q8N2S1 1624 aa25.38■■□□□ 1.65
UBE2E3-205ENST00000602475 IQSEC2Q5JU85 1478 aa25.38■■□□□ 1.65
UBE2E3-205ENST00000602475 KIDINS220Q9ULH0 1771 aa25.37■■□□□ 1.65
UBE2E3-205ENST00000602475 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
UBE2E3-205ENST00000602475 CDC42BPAQ5VT25 1732 aa25.34■■□□□ 1.65
UBE2E3-205ENST00000602475 MROH2AA6NES4 1674 aa25.33■■□□□ 1.65
UBE2E3-205ENST00000602475 CAMSAP1Q5T5Y3 1602 aa25.33■■□□□ 1.65
UBE2E3-205ENST00000602475 CCDC18Q5T9S5 1454 aa25.33■■□□□ 1.65
UBE2E3-205ENST00000602475 SUPT6HQ7KZ85 1726 aaKnown RBP25.3■■□□□ 1.64
UBE2E3-205ENST00000602475 NPATQ14207 1427 aa25.28■■□□□ 1.64
UBE2E3-205ENST00000602475 SAMD9LQ8IVG5 1584 aa25.27■■□□□ 1.64
UBE2E3-205ENST00000602475 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
UBE2E3-205ENST00000602475 CLTCQ00610 1675 aaKnown RBP25.24■■□□□ 1.63
UBE2E3-205ENST00000602475 CASKIN1Q8WXD9 1431 aa25.24■■□□□ 1.63
UBE2E3-205ENST00000602475 ZMYM3Q14202 1370 aa25.22■■□□□ 1.63
UBE2E3-205ENST00000602475 MYO3AQ8NEV4 1616 aa25.22■■□□□ 1.63
UBE2E3-205ENST00000602475 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
UBE2E3-205ENST00000602475 NCKAP5LQ9HCH0 1330 aa25.21■■□□□ 1.63
UBE2E3-205ENST00000602475 ZNF142P52746 1687 aaPredicted RBP25.21■■□□□ 1.63
UBE2E3-205ENST00000602475 SPAG9O60271 1321 aaKnown RBP25.2■■□□□ 1.62
UBE2E3-205ENST00000602475 UBAP1LF5GYI3 381 aa25.2■■□□□ 1.62
UBE2E3-205ENST00000602475 ZNF335Q9H4Z2 1342 aaPredicted RBP25.19■■□□□ 1.62
UBE2E3-205ENST00000602475 ATP7AQ04656 1500 aa25.17■■□□□ 1.62
UBE2E3-205ENST00000602475 CEP170BQ9Y4F5 1589 aaPredicted RBP25.16■■□□□ 1.62
UBE2E3-205ENST00000602475 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
UBE2E3-205ENST00000602475 PKD2Q13563 968 aa25.15■■□□□ 1.62
UBE2E3-205ENST00000602475 FYCO1Q9BQS8 1478 aa25.14■■□□□ 1.61
UBE2E3-205ENST00000602475 HNRNPMP52272 730 aaKnown RBP eCLIP25.13■■□□□ 1.617e-8■■■■□ 26.6
UBE2E3-205ENST00000602475 INO80Q9ULG1 1556 aaPredicted RBP25.13■■□□□ 1.61
UBE2E3-205ENST00000602475 A2MP01023 1474 aa25.12■■□□□ 1.61
UBE2E3-205ENST00000602475 PLXNC1O60486 1568 aa25.12■■□□□ 1.61
UBE2E3-205ENST00000602475 PLEKHH2Q8IVE3 1493 aa25.11■■□□□ 1.61
UBE2E3-205ENST00000602475 GPATCH8Q9UKJ3 1502 aaKnown RBP25.11■■□□□ 1.61
UBE2E3-205ENST00000602475 GGT6Q6P531 493 aa25.1■■□□□ 1.61
UBE2E3-205ENST00000602475 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
UBE2E3-205ENST00000602475 TCOF1Q13428 1488 aaKnown RBP25.09■■□□□ 1.61
UBE2E3-205ENST00000602475 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
UBE2E3-205ENST00000602475 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.61
UBE2E3-205ENST00000602475 KIAA1107Q9UPP5 1409 aa25.06■■□□□ 1.6
UBE2E3-205ENST00000602475 CFDP1Q9UEE9 299 aaPredicted RBP25.06■■□□□ 1.6
UBE2E3-205ENST00000602475 SCAF1Q9H7N4 1312 aaKnown RBP25.05■■□□□ 1.6
UBE2E3-205ENST00000602475 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
UBE2E3-205ENST00000602475 POLR1AO95602 1720 aaPredicted RBP25.03■■□□□ 1.6
UBE2E3-205ENST00000602475 A2ML1A8K2U0 1454 aa25.01■■□□□ 1.59
UBE2E3-205ENST00000602475 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
UBE2E3-205ENST00000602475 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
UBE2E3-205ENST00000602475 MTUS2Q5JR59 1369 aa24.96■■□□□ 1.59
UBE2E3-205ENST00000602475 PIP4K2BP78356 416 aa24.96■■□□□ 1.59
UBE2E3-205ENST00000602475 MED1Q15648 1581 aaPredicted RBP24.96■■□□□ 1.59
UBE2E3-205ENST00000602475 CPS1P31327 1500 aa24.95■■□□□ 1.58
UBE2E3-205ENST00000602475 TOM1O60784 492 aa24.93■■□□□ 1.58
UBE2E3-205ENST00000602475 HSPA1LP34931 641 aa24.93■■□□□ 1.58
UBE2E3-205ENST00000602475 TIAM1Q13009 1591 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms