RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
NEAT1-203ENST00000601801 FER1L4A9Z1Z3 1794 aa23.39■■□□□ 1.33
NEAT1-203ENST00000601801 YEATS2Q9ULM3 1422 aa23.38■■□□□ 1.33
NEAT1-203ENST00000601801 MAGI2Q86UL8 1455 aa23.37■■□□□ 1.33
NEAT1-203ENST00000601801 CDK11AQ9UQ88 783 aaPredicted RBP23.36■■□□□ 1.33
NEAT1-203ENST00000601801 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
NEAT1-203ENST00000601801 CERKQ8TCT0 537 aa23.32■■□□□ 1.32
NEAT1-203ENST00000601801 PLCH2O75038 1416 aa23.3■■□□□ 1.32
NEAT1-203ENST00000601801 MLECQ14165 292 aa23.28■■□□□ 1.32
NEAT1-203ENST00000601801 PREX1Q8TCU6 1659 aa23.28■■□□□ 1.32
NEAT1-203ENST00000601801 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
NEAT1-203ENST00000601801 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
NEAT1-203ENST00000601801 MYO5CQ9NQX4 1742 aa23.26■■□□□ 1.31
NEAT1-203ENST00000601801 KIF14Q15058 1648 aa23.26■■□□□ 1.31
NEAT1-203ENST00000601801 LRRIQ1Q96JM4 1722 aa23.25■■□□□ 1.31
NEAT1-203ENST00000601801 CLIP1P30622 1438 aa23.25■■□□□ 1.31
NEAT1-203ENST00000601801 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
NEAT1-203ENST00000601801 ATP10AO60312 1499 aa23.24■■□□□ 1.31
NEAT1-203ENST00000601801 EFCAB2Q5VUJ9 269 aa23.23■■□□□ 1.31
NEAT1-203ENST00000601801 C9orf84Q5VXU9 1444 aa23.21■■□□□ 1.31
NEAT1-203ENST00000601801 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
NEAT1-203ENST00000601801 STRCQ7RTU9 1775 aa23.19■■□□□ 1.3
NEAT1-203ENST00000601801 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
NEAT1-203ENST00000601801 ARHGAP5Q13017 1502 aa23.16■■□□□ 1.3
NEAT1-203ENST00000601801 SETD1BQ9UPS6 1966 aaKnown RBP23.15■■□□□ 1.3
NEAT1-203ENST00000601801 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
NEAT1-203ENST00000601801 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
NEAT1-203ENST00000601801 KDM5CP41229 1560 aa23.12■■□□□ 1.29
NEAT1-203ENST00000601801 ZNF518AQ6AHZ1 1483 aa23.11■■□□□ 1.29
NEAT1-203ENST00000601801 DMRT2Q9Y5R5 561 aa23.11■■□□□ 1.29
NEAT1-203ENST00000601801 UHRF1BP1Q6BDS2 1440 aa23.09■■□□□ 1.29
NEAT1-203ENST00000601801 CDC42BPBQ9Y5S2 1711 aa23.09■■□□□ 1.29
NEAT1-203ENST00000601801 REREQ9P2R6 1566 aa23.08■■□□□ 1.29
NEAT1-203ENST00000601801 DIP2CQ9Y2E4 1556 aa23.08■■□□□ 1.29
NEAT1-203ENST00000601801 DISP3Q9P2K9 1392 aa23.07■■□□□ 1.28
NEAT1-203ENST00000601801 PREX2Q70Z35 1606 aa23.06■■□□□ 1.28
NEAT1-203ENST00000601801 C3P01024 1663 aa23.06■■□□□ 1.28
NEAT1-203ENST00000601801 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
NEAT1-203ENST00000601801 AFAP1Q8N556 730 aa23.05■■□□□ 1.28
NEAT1-203ENST00000601801 MYT1LQ9UL68 1186 aa23.03■■□□□ 1.28
NEAT1-203ENST00000601801 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
NEAT1-203ENST00000601801 PTPRTO14522 1441 aa23.02■■□□□ 1.28
NEAT1-203ENST00000601801 CDC42BPAQ5VT25 1732 aa23■■□□□ 1.27
NEAT1-203ENST00000601801 SOCS7O14512 581 aa23■■□□□ 1.27
NEAT1-203ENST00000601801 MLH3Q9UHC1 1453 aa22.99■■□□□ 1.27
NEAT1-203ENST00000601801 ABCC1P33527 1531 aa22.99■■□□□ 1.27
NEAT1-203ENST00000601801 AGLP35573 1532 aa22.98■■□□□ 1.27
NEAT1-203ENST00000601801 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
NEAT1-203ENST00000601801 SPATA31D1Q6ZQQ2 1576 aa22.96■■□□□ 1.27
NEAT1-203ENST00000601801 LTBP4Q8N2S1 1624 aa22.96■■□□□ 1.27
NEAT1-203ENST00000601801 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.26
NEAT1-203ENST00000601801 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
NEAT1-203ENST00000601801 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
NEAT1-203ENST00000601801 GPATCH8Q9UKJ3 1502 aaKnown RBP22.92■■□□□ 1.26
NEAT1-203ENST00000601801 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
NEAT1-203ENST00000601801 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
NEAT1-203ENST00000601801 NCOA1Q15788 1441 aa22.9■■□□□ 1.26
NEAT1-203ENST00000601801 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
NEAT1-203ENST00000601801 ESF1Q9H501 851 aaKnown RBP22.89■■□□□ 1.25
NEAT1-203ENST00000601801 SAMD9LQ8IVG5 1584 aa22.89■■□□□ 1.25
NEAT1-203ENST00000601801 CNTLNQ9NXG0 1405 aa22.88■■□□□ 1.25
NEAT1-203ENST00000601801 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
NEAT1-203ENST00000601801 MROH2AA6NES4 1674 aa22.87■■□□□ 1.25
NEAT1-203ENST00000601801 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
NEAT1-203ENST00000601801 SYCP2Q9BX26 1530 aa22.86■■□□□ 1.25
NEAT1-203ENST00000601801 PLEKHH2Q8IVE3 1493 aa22.84■■□□□ 1.25
NEAT1-203ENST00000601801 CAMSAP1Q5T5Y3 1602 aa22.83■■□□□ 1.25
NEAT1-203ENST00000601801 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.251e-323■□□□□ 8.7
NEAT1-203ENST00000601801 EHBP1L1Q8N3D4 1523 aa22.82■■□□□ 1.24
NEAT1-203ENST00000601801 NPATQ14207 1427 aa22.82■■□□□ 1.24
NEAT1-203ENST00000601801 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
NEAT1-203ENST00000601801 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
NEAT1-203ENST00000601801 SUPT6HQ7KZ85 1726 aaKnown RBP22.77■■□□□ 1.24
NEAT1-203ENST00000601801 TIAM1Q13009 1591 aa22.77■■□□□ 1.24
NEAT1-203ENST00000601801 ZNF142P52746 1687 aaPredicted RBP22.76■■□□□ 1.23
NEAT1-203ENST00000601801 ATP7AQ04656 1500 aa22.76■■□□□ 1.23
NEAT1-203ENST00000601801 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
NEAT1-203ENST00000601801 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
NEAT1-203ENST00000601801 INO80Q9ULG1 1556 aaPredicted RBP22.73■■□□□ 1.23
NEAT1-203ENST00000601801 MYO3AQ8NEV4 1616 aa22.73■■□□□ 1.23
NEAT1-203ENST00000601801 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
NEAT1-203ENST00000601801 NCKAP5LQ9HCH0 1330 aa22.72■■□□□ 1.23
NEAT1-203ENST00000601801 ZNF644Q9H582 1327 aaPredicted RBP22.71■■□□□ 1.23
NEAT1-203ENST00000601801 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
NEAT1-203ENST00000601801 PLXNC1O60486 1568 aa22.71■■□□□ 1.23
NEAT1-203ENST00000601801 ZNF335Q9H4Z2 1342 aaPredicted RBP22.7■■□□□ 1.22
NEAT1-203ENST00000601801 CEP170BQ9Y4F5 1589 aaPredicted RBP22.68■■□□□ 1.22
NEAT1-203ENST00000601801 A2MP01023 1474 aa22.68■■□□□ 1.22
NEAT1-203ENST00000601801 TCOF1Q13428 1488 aaKnown RBP22.67■■□□□ 1.22
NEAT1-203ENST00000601801 NCOA2Q15596 1464 aa22.67■■□□□ 1.22
NEAT1-203ENST00000601801 MBD5Q9P267 1494 aa22.66■■□□□ 1.22
NEAT1-203ENST00000601801 PTPRKQ15262 1439 aa22.66■■□□□ 1.22
NEAT1-203ENST00000601801 VPS8Q8N3P4 1428 aa22.66■■□□□ 1.22
NEAT1-203ENST00000601801 UBAP1LF5GYI3 381 aa22.66■■□□□ 1.22
NEAT1-203ENST00000601801 PKD2Q13563 968 aa22.66■■□□□ 1.22
NEAT1-203ENST00000601801 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
NEAT1-203ENST00000601801 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
NEAT1-203ENST00000601801 CAMSAP2Q08AD1 1489 aa22.6■■□□□ 1.21
NEAT1-203ENST00000601801 GGT6Q6P531 493 aa22.6■■□□□ 1.21
NEAT1-203ENST00000601801 RSPH4AQ5TD94 716 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms