RNA–Protein interactions for RNA: ENST00000601133.5

FARP1-233, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-233ENST00000601133 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
FARP1-233ENST00000601133 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
FARP1-233ENST00000601133 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
FARP1-233ENST00000601133 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
FARP1-233ENST00000601133 BOLA1Q9Y3E2 137 aa12.82□□□□□ -0.36
FARP1-233ENST00000601133 NBR1Q14596 966 aa12.81□□□□□ -0.36
FARP1-233ENST00000601133 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
FARP1-233ENST00000601133 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
FARP1-233ENST00000601133 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
FARP1-233ENST00000601133 MARVELD3Q96A59 401 aa12.75□□□□□ -0.37
FARP1-233ENST00000601133 TMEM121BQ9BXQ6 578 aaPredicted RBP12.75□□□□□ -0.37
FARP1-233ENST00000601133 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
FARP1-233ENST00000601133 SNPHO15079 494 aa12.73□□□□□ -0.37
FARP1-233ENST00000601133 SOX12O15370 315 aa12.72□□□□□ -0.37
FARP1-233ENST00000601133 RB1CC1Q8TDY2 1594 aa12.72□□□□□ -0.37
FARP1-233ENST00000601133 G3V3G9 751 aa12.7□□□□□ -0.38
FARP1-233ENST00000601133 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
FARP1-233ENST00000601133 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
FARP1-233ENST00000601133 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
FARP1-233ENST00000601133 RYDENQ9NUL5 291 aaKnown RBP12.66□□□□□ -0.38
FARP1-233ENST00000601133 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
FARP1-233ENST00000601133 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
FARP1-233ENST00000601133 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
FARP1-233ENST00000601133 POTEBQ6S5H4 581 aa12.63□□□□□ -0.39
FARP1-233ENST00000601133 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
FARP1-233ENST00000601133 NLRP6P59044 892 aa12.59□□□□□ -0.39
FARP1-233ENST00000601133 NACADO15069 1562 aa12.59□□□□□ -0.39
FARP1-233ENST00000601133 EMP3P54852 163 aa12.58□□□□□ -0.4
FARP1-233ENST00000601133 DAXXQ9UER7 740 aaPredicted RBP12.56□□□□□ -0.4
FARP1-233ENST00000601133 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
FARP1-233ENST00000601133 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
FARP1-233ENST00000601133 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
FARP1-233ENST00000601133 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
FARP1-233ENST00000601133 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
FARP1-233ENST00000601133 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
FARP1-233ENST00000601133 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
FARP1-233ENST00000601133 PPP1R37O75864 691 aa12.47□□□□□ -0.41
FARP1-233ENST00000601133 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
FARP1-233ENST00000601133 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
FARP1-233ENST00000601133 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.41
FARP1-233ENST00000601133 ARXQ96QS3 562 aa12.45□□□□□ -0.42
FARP1-233ENST00000601133 SPNS2Q8IVW8 549 aa12.44□□□□□ -0.42
FARP1-233ENST00000601133 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
FARP1-233ENST00000601133 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
FARP1-233ENST00000601133 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
FARP1-233ENST00000601133 KIF3CO14782 793 aa12.41□□□□□ -0.42
FARP1-233ENST00000601133 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
FARP1-233ENST00000601133 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
FARP1-233ENST00000601133 ERBB3P21860 1342 aa12.38□□□□□ -0.43
FARP1-233ENST00000601133 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
FARP1-233ENST00000601133 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
FARP1-233ENST00000601133 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
FARP1-233ENST00000601133 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
FARP1-233ENST00000601133 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
FARP1-233ENST00000601133 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
FARP1-233ENST00000601133 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
FARP1-233ENST00000601133 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
FARP1-233ENST00000601133 BICRAQ9NZM4 1560 aa12.35□□□□□ -0.43
FARP1-233ENST00000601133 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
FARP1-233ENST00000601133 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.29□□□□□ -0.44
FARP1-233ENST00000601133 GTF3C3Q9Y5Q9 886 aa12.27□□□□□ -0.45
FARP1-233ENST00000601133 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
FARP1-233ENST00000601133 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
FARP1-233ENST00000601133 E2F4Q16254 413 aa12.24□□□□□ -0.45
FARP1-233ENST00000601133 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
FARP1-233ENST00000601133 NUDT7P0C024 238 aa12.23□□□□□ -0.45
FARP1-233ENST00000601133 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
FARP1-233ENST00000601133 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
FARP1-233ENST00000601133 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
FARP1-233ENST00000601133 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
FARP1-233ENST00000601133 SLC34A2O95436 690 aa12.2□□□□□ -0.46
FARP1-233ENST00000601133 DCAF1Q9Y4B6 1507 aa12.2□□□□□ -0.46
FARP1-233ENST00000601133 SEMA3EO15041 775 aa12.19□□□□□ -0.46
FARP1-233ENST00000601133 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
FARP1-233ENST00000601133 SHROOM4Q9ULL8 1493 aa12.16□□□□□ -0.46
FARP1-233ENST00000601133 LHX6Q9UPM6 363 aa12.16□□□□□ -0.46
FARP1-233ENST00000601133 DSG2Q14126 1118 aa12.15□□□□□ -0.46
FARP1-233ENST00000601133 HOMEZQ8IX15 550 aa12.15□□□□□ -0.46
FARP1-233ENST00000601133 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
FARP1-233ENST00000601133 SCRIBQ14160 1630 aa12.15□□□□□ -0.47
FARP1-233ENST00000601133 TESPA1A2RU30 521 aaPredicted RBP12.14□□□□□ -0.47
FARP1-233ENST00000601133 FOXK1P85037 733 aa12.14□□□□□ -0.47
FARP1-233ENST00000601133 MFSD10Q14728 455 aa12.14□□□□□ -0.47
FARP1-233ENST00000601133 POTEEQ6S8J3 1075 aa12.14□□□□□ -0.47
FARP1-233ENST00000601133 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
FARP1-233ENST00000601133 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
FARP1-233ENST00000601133 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
FARP1-233ENST00000601133 PDE4AP27815 886 aa12.12□□□□□ -0.47
FARP1-233ENST00000601133 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
FARP1-233ENST00000601133 PTCD2Q8WV60 388 aaKnown RBP12.1□□□□□ -0.47
FARP1-233ENST00000601133 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
FARP1-233ENST00000601133 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
FARP1-233ENST00000601133 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
FARP1-233ENST00000601133 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
FARP1-233ENST00000601133 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
FARP1-233ENST00000601133 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
FARP1-233ENST00000601133 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
FARP1-233ENST00000601133 LSM11P83369 360 aaKnown RBP eCLIP12.04□□□□□ -0.48
FARP1-233ENST00000601133 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
FARP1-233ENST00000601133 SLC24A3Q9HC58 644 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms