RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 FBXO41Q8TF61 875 aa18.52■□□□□ 0.56
CHMP2A-207ENST00000600804 ZFYVE16Q7Z3T8 1539 aa18.52■□□□□ 0.56
CHMP2A-207ENST00000600804 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.55
CHMP2A-207ENST00000600804 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
CHMP2A-207ENST00000600804 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-207ENST00000600804 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
CHMP2A-207ENST00000600804 KIF14Q15058 1648 aa18.48■□□□□ 0.55
CHMP2A-207ENST00000600804 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
CHMP2A-207ENST00000600804 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
CHMP2A-207ENST00000600804 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
CHMP2A-207ENST00000600804 MAGI2Q86UL8 1455 aa18.43■□□□□ 0.54
CHMP2A-207ENST00000600804 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
CHMP2A-207ENST00000600804 HSPA2P54652 639 aa18.42■□□□□ 0.54
CHMP2A-207ENST00000600804 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
CHMP2A-207ENST00000600804 PLCH2O75038 1416 aa18.41■□□□□ 0.54
CHMP2A-207ENST00000600804 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
CHMP2A-207ENST00000600804 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
CHMP2A-207ENST00000600804 STRCQ7RTU9 1775 aa18.39■□□□□ 0.53
CHMP2A-207ENST00000600804 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
CHMP2A-207ENST00000600804 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
CHMP2A-207ENST00000600804 MAP3K1Q13233 1512 aa18.37■□□□□ 0.53
CHMP2A-207ENST00000600804 KDM5CP41229 1560 aa18.37■□□□□ 0.53
CHMP2A-207ENST00000600804 MLECQ14165 292 aa18.35■□□□□ 0.53
CHMP2A-207ENST00000600804 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
CHMP2A-207ENST00000600804 DIP2CQ9Y2E4 1556 aa18.34■□□□□ 0.53
CHMP2A-207ENST00000600804 ATP10AO60312 1499 aa18.34■□□□□ 0.53
CHMP2A-207ENST00000600804 C9orf84Q5VXU9 1444 aa18.33■□□□□ 0.53
CHMP2A-207ENST00000600804 C3P01024 1663 aa18.32■□□□□ 0.52
CHMP2A-207ENST00000600804 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
CHMP2A-207ENST00000600804 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
CHMP2A-207ENST00000600804 SETD1BQ9UPS6 1966 aaKnown RBP18.3■□□□□ 0.52
CHMP2A-207ENST00000600804 CDC42BPAQ5VT25 1732 aa18.3■□□□□ 0.52
CHMP2A-207ENST00000600804 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
CHMP2A-207ENST00000600804 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
CHMP2A-207ENST00000600804 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
CHMP2A-207ENST00000600804 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
CHMP2A-207ENST00000600804 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.52
CHMP2A-207ENST00000600804 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.52
CHMP2A-207ENST00000600804 CDK11AQ9UQ88 783 aaPredicted RBP18.27■□□□□ 0.52
CHMP2A-207ENST00000600804 KIDINS220Q9ULH0 1771 aa18.27■□□□□ 0.51
CHMP2A-207ENST00000600804 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-207ENST00000600804 ABCC1P33527 1531 aa18.25■□□□□ 0.51
CHMP2A-207ENST00000600804 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
CHMP2A-207ENST00000600804 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
CHMP2A-207ENST00000600804 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
CHMP2A-207ENST00000600804 APLP2Q06481 763 aa18.22■□□□□ 0.51
CHMP2A-207ENST00000600804 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
CHMP2A-207ENST00000600804 TRAPPC8Q9Y2L5 1435 aa18.2■□□□□ 0.5
CHMP2A-207ENST00000600804 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
CHMP2A-207ENST00000600804 EHBP1L1Q8N3D4 1523 aa18.19■□□□□ 0.5
CHMP2A-207ENST00000600804 AGLP35573 1532 aa18.18■□□□□ 0.5
CHMP2A-207ENST00000600804 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
CHMP2A-207ENST00000600804 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
CHMP2A-207ENST00000600804 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
CHMP2A-207ENST00000600804 MROH2AA6NES4 1674 aa18.15■□□□□ 0.5
CHMP2A-207ENST00000600804 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
CHMP2A-207ENST00000600804 LTBP4Q8N2S1 1624 aa18.13■□□□□ 0.49
CHMP2A-207ENST00000600804 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
CHMP2A-207ENST00000600804 CLTCQ00610 1675 aaKnown RBP18.1■□□□□ 0.49
CHMP2A-207ENST00000600804 SYCP2Q9BX26 1530 aa18.09■□□□□ 0.49
CHMP2A-207ENST00000600804 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.49
CHMP2A-207ENST00000600804 PTPRTO14522 1441 aa18.08■□□□□ 0.49
CHMP2A-207ENST00000600804 ZNF142P52746 1687 aaPredicted RBP18.07■□□□□ 0.48
CHMP2A-207ENST00000600804 PLXNC1O60486 1568 aa18.07■□□□□ 0.48
CHMP2A-207ENST00000600804 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
CHMP2A-207ENST00000600804 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
CHMP2A-207ENST00000600804 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
CHMP2A-207ENST00000600804 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
CHMP2A-207ENST00000600804 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
CHMP2A-207ENST00000600804 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
CHMP2A-207ENST00000600804 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
CHMP2A-207ENST00000600804 ILDR2Q71H61 639 aa18.03■□□□□ 0.48
CHMP2A-207ENST00000600804 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
CHMP2A-207ENST00000600804 CNTLNQ9NXG0 1405 aa18.01■□□□□ 0.47
CHMP2A-207ENST00000600804 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
CHMP2A-207ENST00000600804 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
CHMP2A-207ENST00000600804 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
CHMP2A-207ENST00000600804 NPATQ14207 1427 aa17.98■□□□□ 0.47
CHMP2A-207ENST00000600804 MYOM3Q5VTT5 1437 aa17.98■□□□□ 0.47
CHMP2A-207ENST00000600804 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
CHMP2A-207ENST00000600804 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
CHMP2A-207ENST00000600804 MIA2Q96PC5 1412 aa17.97■□□□□ 0.47
CHMP2A-207ENST00000600804 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.47
CHMP2A-207ENST00000600804 HNRNPMP52272 730 aaKnown RBP eCLIP17.96■□□□□ 0.47
CHMP2A-207ENST00000600804 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
CHMP2A-207ENST00000600804 ZNF777Q9ULD5 760 aaPredicted RBP17.95■□□□□ 0.46
CHMP2A-207ENST00000600804 A2MP01023 1474 aa17.94■□□□□ 0.46
CHMP2A-207ENST00000600804 PTPRKQ15262 1439 aa17.93■□□□□ 0.46
CHMP2A-207ENST00000600804 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
CHMP2A-207ENST00000600804 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
CHMP2A-207ENST00000600804 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
CHMP2A-207ENST00000600804 POLR1AO95602 1720 aaPredicted RBP17.92■□□□□ 0.46
CHMP2A-207ENST00000600804 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
CHMP2A-207ENST00000600804 TCOF1Q13428 1488 aaKnown RBP17.91■□□□□ 0.46
CHMP2A-207ENST00000600804 CFDP1Q9UEE9 299 aaPredicted RBP17.91■□□□□ 0.46
CHMP2A-207ENST00000600804 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
CHMP2A-207ENST00000600804 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
CHMP2A-207ENST00000600804 PLA2R1Q13018 1463 aa17.89■□□□□ 0.45
CHMP2A-207ENST00000600804 PLEKHH2Q8IVE3 1493 aa17.89■□□□□ 0.45
CHMP2A-207ENST00000600804 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms