RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 DAPK1P53355 1430 aa29.61■■■□□ 2.33
PNKP-214ENST00000600573 ROCK1Q13464 1354 aa29.61■■■□□ 2.33
PNKP-214ENST00000600573 DHX57Q6P158 1386 aaKnown RBP29.61■■■□□ 2.33
PNKP-214ENST00000600573 CDC42BPAQ5VT25 1732 aa29.61■■■□□ 2.33
PNKP-214ENST00000600573 DNMT1P26358 1616 aaKnown RBP29.6■■■□□ 2.33
PNKP-214ENST00000600573 ABCC5O15440 1437 aa29.58■■■□□ 2.33
PNKP-214ENST00000600573 ZNF644Q9H582 1327 aaPredicted RBP29.58■■■□□ 2.33
PNKP-214ENST00000600573 RSPH4AQ5TD94 716 aa29.58■■■□□ 2.33
PNKP-214ENST00000600573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.58■■■□□ 2.33
PNKP-214ENST00000600573 NAIPQ13075 1403 aa29.56■■■□□ 2.32
PNKP-214ENST00000600573 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
PNKP-214ENST00000600573 WDR7Q9Y4E6 1490 aa29.55■■■□□ 2.32
PNKP-214ENST00000600573 KCNH8Q96L42 1107 aa29.54■■■□□ 2.32
PNKP-214ENST00000600573 PREX2Q70Z35 1606 aa29.53■■■□□ 2.32
PNKP-214ENST00000600573 PLCH2O75038 1416 aa29.5■■■□□ 2.31
PNKP-214ENST00000600573 PLEKHH2Q8IVE3 1493 aa29.49■■■□□ 2.31
PNKP-214ENST00000600573 CHIC2Q9UKJ5 165 aa29.49■■■□□ 2.31
PNKP-214ENST00000600573 TTC37Q6PGP7 1564 aa29.48■■■□□ 2.31
PNKP-214ENST00000600573 ARAP3Q8WWN8 1544 aa29.46■■■□□ 2.31
PNKP-214ENST00000600573 ASXL2Q76L83 1435 aa29.46■■■□□ 2.31
PNKP-214ENST00000600573 SHANK2Q9UPX8 1470 aa29.46■■■□□ 2.31
PNKP-214ENST00000600573 CYB5RLQ6IPT4 315 aa29.45■■■□□ 2.31
PNKP-214ENST00000600573 ARHGEF5Q12774 1597 aa29.45■■■□□ 2.31
PNKP-214ENST00000600573 KIAA1107Q9UPP5 1409 aa29.45■■■□□ 2.3
PNKP-214ENST00000600573 MYO5CQ9NQX4 1742 aa29.45■■■□□ 2.3
PNKP-214ENST00000600573 CDC42BPBQ9Y5S2 1711 aa29.45■■■□□ 2.3
PNKP-214ENST00000600573 ARHGAP5Q13017 1502 aa29.45■■■□□ 2.3
PNKP-214ENST00000600573 TSPY4P0CV99 314 aa29.45■■■□□ 2.3
PNKP-214ENST00000600573 TSPY10P0CW01 314 aa29.45■■■□□ 2.3
PNKP-214ENST00000600573 EFCAB2Q5VUJ9 269 aa29.45■■■□□ 2.3
PNKP-214ENST00000600573 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
PNKP-214ENST00000600573 GCC2Q8IWJ2 1684 aa29.44■■■□□ 2.3
PNKP-214ENST00000600573 ADGRL2O95490 1459 aa29.44■■■□□ 2.3
PNKP-214ENST00000600573 ANKRD30AQ9BXX3 1397 aa29.41■■■□□ 2.3
PNKP-214ENST00000600573 MBD5Q9P267 1494 aa29.4■■■□□ 2.3
PNKP-214ENST00000600573 NCOA1Q15788 1441 aa29.39■■■□□ 2.29
PNKP-214ENST00000600573 SAMD9LQ8IVG5 1584 aa29.38■■■□□ 2.29
PNKP-214ENST00000600573 CROCC2H7BZ55 1655 aa29.37■■■□□ 2.29
PNKP-214ENST00000600573 CCDC141Q6ZP82 1450 aa29.36■■■□□ 2.29
PNKP-214ENST00000600573 ABCA9Q8IUA7 1624 aa29.35■■■□□ 2.29
PNKP-214ENST00000600573 HNRNPMP52272 730 aaKnown RBP eCLIP29.34■■■□□ 2.29
PNKP-214ENST00000600573 ADGBQ8N7X0 1667 aa29.34■■■□□ 2.29
PNKP-214ENST00000600573 MAPKBP1O60336 1514 aa29.34■■■□□ 2.29
PNKP-214ENST00000600573 C9orf84Q5VXU9 1444 aa29.33■■■□□ 2.29
PNKP-214ENST00000600573 MAST1Q9Y2H9 1570 aa29.26■■■□□ 2.27
PNKP-214ENST00000600573 SYCP2Q9BX26 1530 aa29.25■■■□□ 2.27
PNKP-214ENST00000600573 TIMELESSQ9UNS1 1208 aa29.23■■■□□ 2.27
PNKP-214ENST00000600573 TRIM52Q96A61 297 aa29.22■■■□□ 2.27
PNKP-214ENST00000600573 ABCC1P33527 1531 aa29.22■■■□□ 2.27
PNKP-214ENST00000600573 FANCAO15360 1455 aa29.2■■■□□ 2.26
PNKP-214ENST00000600573 ANKRD50Q9ULJ7 1429 aa29.2■■■□□ 2.26
PNKP-214ENST00000600573 KIF15Q9NS87 1388 aa29.17■■■□□ 2.26
PNKP-214ENST00000600573 CD109Q6YHK3 1445 aa29.16■■■□□ 2.26
PNKP-214ENST00000600573 KDM6BO15054 1643 aa29.16■■■□□ 2.26
PNKP-214ENST00000600573 ARHGEF12Q9NZN5 1544 aa29.16■■■□□ 2.26
PNKP-214ENST00000600573 MPHOSPH9Q99550 1183 aa29.14■■■□□ 2.26
PNKP-214ENST00000600573 RTEL1-TNFRSF6BF6WH68 1400 aa29.13■■■□□ 2.25
PNKP-214ENST00000600573 PLXNC1O60486 1568 aa29.1■■■□□ 2.25
PNKP-214ENST00000600573 CFAP74Q9C0B2 1584 aa29.1■■■□□ 2.25
PNKP-214ENST00000600573 GLI2P10070 1586 aa29.08■■■□□ 2.25
PNKP-214ENST00000600573 TRAPPC8Q9Y2L5 1435 aa29.08■■■□□ 2.25
PNKP-214ENST00000600573 ADGRL1O94910 1474 aa29.08■■■□□ 2.25
PNKP-214ENST00000600573 SPAG9O60271 1321 aaKnown RBP29.06■■■□□ 2.24
PNKP-214ENST00000600573 SCAPERQ9BY12 1400 aa29.05■■■□□ 2.24
PNKP-214ENST00000600573 DUOX2Q9NRD8 1548 aa29.03■■■□□ 2.24
PNKP-214ENST00000600573 SLC4A1APQ9BWU0 796 aaKnown RBP29.03■■■□□ 2.24
PNKP-214ENST00000600573 NEO1Q92859 1461 aa29.03■■■□□ 2.24
PNKP-214ENST00000600573 ZNF316A6NFI3 1004 aaPredicted RBP29■■■□□ 2.23
PNKP-214ENST00000600573 AFAP1Q8N556 730 aa29■■■□□ 2.23
PNKP-214ENST00000600573 SIN3AQ96ST3 1273 aa29■■■□□ 2.23
PNKP-214ENST00000600573 ERBINQ96RT1 1412 aa28.99■■■□□ 2.23
PNKP-214ENST00000600573 KDM5DQ9BY66 1539 aa28.99■■■□□ 2.23
PNKP-214ENST00000600573 DENND4BO75064 1496 aaPredicted RBP28.98■■■□□ 2.23
PNKP-214ENST00000600573 NEUROD1Q13562 356 aa28.98■■■□□ 2.23
PNKP-214ENST00000600573 NUP155O75694 1391 aa28.96■■■□□ 2.23
PNKP-214ENST00000600573 PZPP20742 1482 aa28.96■■■□□ 2.23
PNKP-214ENST00000600573 ZNF518AQ6AHZ1 1483 aa28.96■■■□□ 2.23
PNKP-214ENST00000600573 MAP3K4Q9Y6R4 1608 aa28.93■■■□□ 2.22
PNKP-214ENST00000600573 ZFYVE16Q7Z3T8 1539 aa28.93■■■□□ 2.22
PNKP-214ENST00000600573 ANKRD30BQ9BXX2 1392 aa28.91■■■□□ 2.22
PNKP-214ENST00000600573 DIP2BQ9P265 1576 aa28.91■■■□□ 2.22
PNKP-214ENST00000600573 TONSLQ96HA7 1378 aa28.91■■■□□ 2.22
PNKP-214ENST00000600573 FAM69CQ0P6D2 419 aa28.9■■■□□ 2.22
PNKP-214ENST00000600573 ATP7AQ04656 1500 aa28.9■■■□□ 2.22
PNKP-214ENST00000600573 INO80Q9ULG1 1556 aaPredicted RBP28.89■■■□□ 2.21
PNKP-214ENST00000600573 POGZQ7Z3K3 1410 aa28.88■■■□□ 2.21
PNKP-214ENST00000600573 UNC13BO14795 1591 aa28.86■■■□□ 2.21
PNKP-214ENST00000600573 PKD2Q13563 968 aa28.85■■■□□ 2.21
PNKP-214ENST00000600573 MLH3Q9UHC1 1453 aa28.85■■■□□ 2.21
PNKP-214ENST00000600573 PPP1R15AO75807 674 aaPredicted RBP28.83■■■□□ 2.21
PNKP-214ENST00000600573 KDM5CP41229 1560 aa28.83■■■□□ 2.21
PNKP-214ENST00000600573 MYT1LQ9UL68 1186 aa28.83■■■□□ 2.21
PNKP-214ENST00000600573 DHX29Q7Z478 1369 aaKnown RBP28.83■■■□□ 2.21
PNKP-214ENST00000600573 MAGI2Q86UL8 1455 aa28.81■■■□□ 2.2
PNKP-214ENST00000600573 TEX14Q8IWB6 1497 aa28.8■■■□□ 2.2
PNKP-214ENST00000600573 FAM135AQ9P2D6 1515 aa28.79■■■□□ 2.2
PNKP-214ENST00000600573 RPRD2Q5VT52 1461 aaKnown RBP28.78■■■□□ 2.2
PNKP-214ENST00000600573 FOXD1Q16676 465 aa28.78■■■□□ 2.2
PNKP-214ENST00000600573 DIEXFQ68CQ4 756 aaKnown RBP28.78■■■□□ 2.2
PNKP-214ENST00000600573 KIF13AQ9H1H9 1805 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms