RNA–Protein interactions for RNA: ENST00000599151.5

FARP1-227, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-227ENST00000599151 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
FARP1-227ENST00000599151 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
FARP1-227ENST00000599151 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
FARP1-227ENST00000599151 ERBB3P21860 1342 aa13.22□□□□□ -0.29
FARP1-227ENST00000599151 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
FARP1-227ENST00000599151 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
FARP1-227ENST00000599151 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
FARP1-227ENST00000599151 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
FARP1-227ENST00000599151 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
FARP1-227ENST00000599151 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
FARP1-227ENST00000599151 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
FARP1-227ENST00000599151 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
FARP1-227ENST00000599151 KIF3CO14782 793 aa13.14□□□□□ -0.31
FARP1-227ENST00000599151 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FARP1-227ENST00000599151 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
FARP1-227ENST00000599151 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
FARP1-227ENST00000599151 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-227ENST00000599151 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
FARP1-227ENST00000599151 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-227ENST00000599151 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
FARP1-227ENST00000599151 PPP1R37O75864 691 aa13.05□□□□□ -0.32
FARP1-227ENST00000599151 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-227ENST00000599151 DNAJC5Q9H3Z4 198 aa13.05□□□□□ -0.32
FARP1-227ENST00000599151 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
FARP1-227ENST00000599151 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
FARP1-227ENST00000599151 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-227ENST00000599151 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
FARP1-227ENST00000599151 FOXK1P85037 733 aa12.94□□□□□ -0.34
FARP1-227ENST00000599151 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
FARP1-227ENST00000599151 NUDT7P0C024 238 aa12.93□□□□□ -0.34
FARP1-227ENST00000599151 PTGER2P43116 358 aa12.92□□□□□ -0.34
FARP1-227ENST00000599151 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
FARP1-227ENST00000599151 PBX2P40425 430 aa12.9□□□□□ -0.34
FARP1-227ENST00000599151 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
FARP1-227ENST00000599151 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
FARP1-227ENST00000599151 TBC1D12O60347 775 aa12.87□□□□□ -0.35
FARP1-227ENST00000599151 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
FARP1-227ENST00000599151 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FARP1-227ENST00000599151 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
FARP1-227ENST00000599151 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
FARP1-227ENST00000599151 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
FARP1-227ENST00000599151 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-227ENST00000599151 DSG2Q14126 1118 aa12.83□□□□□ -0.36
FARP1-227ENST00000599151 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
FARP1-227ENST00000599151 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
FARP1-227ENST00000599151 PDE4AP27815 886 aa12.77□□□□□ -0.37
FARP1-227ENST00000599151 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
FARP1-227ENST00000599151 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
FARP1-227ENST00000599151 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
FARP1-227ENST00000599151 RTN4Q9NQC3 1192 aaKnown RBP12.74□□□□□ -0.37
FARP1-227ENST00000599151 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
FARP1-227ENST00000599151 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
FARP1-227ENST00000599151 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
FARP1-227ENST00000599151 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
FARP1-227ENST00000599151 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
FARP1-227ENST00000599151 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
FARP1-227ENST00000599151 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
FARP1-227ENST00000599151 TK2O00142 265 aa12.66□□□□□ -0.38
FARP1-227ENST00000599151 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
FARP1-227ENST00000599151 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
FARP1-227ENST00000599151 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
FARP1-227ENST00000599151 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
FARP1-227ENST00000599151 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
FARP1-227ENST00000599151 MFSD10Q14728 455 aa12.59□□□□□ -0.39
FARP1-227ENST00000599151 PSEN2P49810 448 aa12.58□□□□□ -0.4
FARP1-227ENST00000599151 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
FARP1-227ENST00000599151 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
FARP1-227ENST00000599151 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
FARP1-227ENST00000599151 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
FARP1-227ENST00000599151 DMRTA1Q5VZB9 504 aa12.55□□□□□ -0.4
FARP1-227ENST00000599151 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
FARP1-227ENST00000599151 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
FARP1-227ENST00000599151 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
FARP1-227ENST00000599151 EVI5O60447 810 aa12.54□□□□□ -0.4
FARP1-227ENST00000599151 FOSBP53539 338 aa12.54□□□□□ -0.4
FARP1-227ENST00000599151 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
FARP1-227ENST00000599151 HRO43593 1189 aa12.53□□□□□ -0.4
FARP1-227ENST00000599151 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
FARP1-227ENST00000599151 PTPREP23469 700 aa12.51□□□□□ -0.41
FARP1-227ENST00000599151 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
FARP1-227ENST00000599151 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
FARP1-227ENST00000599151 SPRYD3Q8NCJ5 442 aa12.47□□□□□ -0.41
FARP1-227ENST00000599151 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
FARP1-227ENST00000599151 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.41
FARP1-227ENST00000599151 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
FARP1-227ENST00000599151 CAMK2BQ13554 666 aa12.4□□□□□ -0.42
FARP1-227ENST00000599151 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
FARP1-227ENST00000599151 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
FARP1-227ENST00000599151 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
FARP1-227ENST00000599151 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
FARP1-227ENST00000599151 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
FARP1-227ENST00000599151 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
FARP1-227ENST00000599151 PHF14O94880 888 aa12.37□□□□□ -0.43
FARP1-227ENST00000599151 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
FARP1-227ENST00000599151 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
FARP1-227ENST00000599151 PCDHGA10Q9Y5H3 936 aa12.36□□□□□ -0.43
FARP1-227ENST00000599151 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
FARP1-227ENST00000599151 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
FARP1-227ENST00000599151 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
FARP1-227ENST00000599151 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms