RNA–Protein interactions for RNA: ENST00000598197.1

USP29-202, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 BASIC

Gene USP29, Length 3,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-202ENST00000598197 ARHGEF5Q12774 1597 aa6.91□□□□□ -1.3
USP29-202ENST00000598197 NUP153P49790 1475 aaKnown RBP6.91□□□□□ -1.3
USP29-202ENST00000598197 MAST1Q9Y2H9 1570 aa6.9□□□□□ -1.3
USP29-202ENST00000598197 FBLN2P98095 1184 aa6.89□□□□□ -1.31
USP29-202ENST00000598197 KDM6BO15054 1643 aa6.89□□□□□ -1.31
USP29-202ENST00000598197 FOXD1Q16676 465 aa6.88□□□□□ -1.31
USP29-202ENST00000598197 CENPBP07199 599 aaPredicted RBP6.88□□□□□ -1.31
USP29-202ENST00000598197 ARXQ96QS3 562 aa6.88□□□□□ -1.31
USP29-202ENST00000598197 LAMC1P11047 1609 aa6.87□□□□□ -1.31
USP29-202ENST00000598197 PREX2Q70Z35 1606 aa6.87□□□□□ -1.31
USP29-202ENST00000598197 MBD5Q9P267 1494 aa6.87□□□□□ -1.31
USP29-202ENST00000598197 TDRD9Q8NDG6 1382 aaKnown RBP6.87□□□□□ -1.31
USP29-202ENST00000598197 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
USP29-202ENST00000598197 ABCC10Q5T3U5 1492 aa6.86□□□□□ -1.31
USP29-202ENST00000598197 HNRNPUL2Q1KMD3 747 aaKnown RBP6.86□□□□□ -1.31
USP29-202ENST00000598197 KDM2AQ9Y2K7 1162 aa6.85□□□□□ -1.31
USP29-202ENST00000598197 PLXNC1O60486 1568 aa6.85□□□□□ -1.31
USP29-202ENST00000598197 KIF14Q15058 1648 aa6.85□□□□□ -1.31
USP29-202ENST00000598197 NEUROD1Q13562 356 aa6.85□□□□□ -1.31
USP29-202ENST00000598197 CDC42BPBQ9Y5S2 1711 aa6.85□□□□□ -1.31
USP29-202ENST00000598197 UNC13BO14795 1591 aa6.85□□□□□ -1.31
USP29-202ENST00000598197 TEX14Q8IWB6 1497 aa6.84□□□□□ -1.31
USP29-202ENST00000598197 DAPK1P53355 1430 aa6.84□□□□□ -1.31
USP29-202ENST00000598197 CDK13Q14004 1512 aaKnown RBP6.84□□□□□ -1.31
USP29-202ENST00000598197 E9PCH4 1651 aa6.84□□□□□ -1.32
USP29-202ENST00000598197 TROQ12816 1431 aaPredicted RBP6.83□□□□□ -1.32
USP29-202ENST00000598197 MTUS2Q5JR59 1369 aa6.83□□□□□ -1.32
USP29-202ENST00000598197 KLHL34Q8N239 644 aa6.83□□□□□ -1.32
USP29-202ENST00000598197 RPRD2Q5VT52 1461 aaKnown RBP6.83□□□□□ -1.32
USP29-202ENST00000598197 CHD1O14646 1710 aa6.83□□□□□ -1.32
USP29-202ENST00000598197 ARHGEF12Q9NZN5 1544 aa6.83□□□□□ -1.32
USP29-202ENST00000598197 NEURL4Q96JN8 1562 aa6.83□□□□□ -1.32
USP29-202ENST00000598197 PTPRGP23470 1445 aa6.82□□□□□ -1.32
USP29-202ENST00000598197 ARAP3Q8WWN8 1544 aa6.82□□□□□ -1.32
USP29-202ENST00000598197 PODXL2Q9NZ53 605 aa6.82□□□□□ -1.32
USP29-202ENST00000598197 GTF3C3Q9Y5Q9 886 aa6.82□□□□□ -1.32
USP29-202ENST00000598197 ABCC5O15440 1437 aa6.81□□□□□ -1.32
USP29-202ENST00000598197 CAMSAP2Q08AD1 1489 aa6.81□□□□□ -1.32
USP29-202ENST00000598197 MAGI2Q86UL8 1455 aa6.81□□□□□ -1.32
USP29-202ENST00000598197 GPATCH8Q9UKJ3 1502 aaKnown RBP6.81□□□□□ -1.32
USP29-202ENST00000598197 PPP1R15AO75807 674 aaPredicted RBP6.81□□□□□ -1.32
USP29-202ENST00000598197 MIER1Q8N108 512 aa6.81□□□□□ -1.32
USP29-202ENST00000598197 MYO5CQ9NQX4 1742 aa6.8□□□□□ -1.32
USP29-202ENST00000598197 CLASP1Q7Z460 1538 aa6.8□□□□□ -1.32
USP29-202ENST00000598197 PZPP20742 1482 aa6.8□□□□□ -1.32
USP29-202ENST00000598197 SPATA31E1Q6ZUB1 1445 aa6.8□□□□□ -1.32
USP29-202ENST00000598197 IQGAP3Q86VI3 1631 aa6.79□□□□□ -1.32
USP29-202ENST00000598197 UHRF1BP1Q6BDS2 1440 aa6.79□□□□□ -1.32
USP29-202ENST00000598197 KDM5CP41229 1560 aa6.79□□□□□ -1.32
USP29-202ENST00000598197 UHRF1BP1LA0JNW5 1464 aa6.79□□□□□ -1.32
USP29-202ENST00000598197 DEPDC5O75140 1603 aa6.78□□□□□ -1.32
USP29-202ENST00000598197 CCER2I3L3R5 266 aa6.78□□□□□ -1.32
USP29-202ENST00000598197 BCORL1Q5H9F3 1711 aa6.78□□□□□ -1.32
USP29-202ENST00000598197 ANKRD30BQ9BXX2 1392 aa6.78□□□□□ -1.32
USP29-202ENST00000598197 SAMD9LQ8IVG5 1584 aa6.78□□□□□ -1.32
USP29-202ENST00000598197 RNF17Q9BXT8 1623 aaKnown RBP6.77□□□□□ -1.33
USP29-202ENST00000598197 NCOA1Q15788 1441 aa6.77□□□□□ -1.33
USP29-202ENST00000598197 CARMIL2Q6F5E8 1435 aa6.77□□□□□ -1.33
USP29-202ENST00000598197 ATP10AO60312 1499 aa6.77□□□□□ -1.33
USP29-202ENST00000598197 HOMEZQ8IX15 550 aa6.76□□□□□ -1.33
USP29-202ENST00000598197 ERCC6Q03468 1493 aa6.76□□□□□ -1.33
USP29-202ENST00000598197 TRPM1Q7Z4N2 1603 aa6.75□□□□□ -1.33
USP29-202ENST00000598197 ATP10BO94823 1461 aa6.75□□□□□ -1.33
USP29-202ENST00000598197 DNAJC5BQ9UF47 199 aa6.75□□□□□ -1.33
USP29-202ENST00000598197 KIAA1210Q9ULL0 1709 aa6.74□□□□□ -1.33
USP29-202ENST00000598197 EIF2AK4Q9P2K8 1649 aaKnown RBP6.74□□□□□ -1.33
USP29-202ENST00000598197 ZMYM4Q5VZL5 1548 aa6.74□□□□□ -1.33
USP29-202ENST00000598197 ABCC2Q92887 1545 aa6.74□□□□□ -1.33
USP29-202ENST00000598197 TTBK1Q5TCY1 1321 aaPredicted RBP6.74□□□□□ -1.33
USP29-202ENST00000598197 WDR7Q9Y4E6 1490 aa6.74□□□□□ -1.33
USP29-202ENST00000598197 FOXD4L1Q9NU39 408 aa6.73□□□□□ -1.33
USP29-202ENST00000598197 CEP152O94986 1710 aa6.73□□□□□ -1.33
USP29-202ENST00000598197 PLB1Q6P1J6 1458 aa6.73□□□□□ -1.33
USP29-202ENST00000598197 RALGAPBQ86X10 1494 aa6.73□□□□□ -1.33
USP29-202ENST00000598197 KIAA1107Q9UPP5 1409 aa6.73□□□□□ -1.33
USP29-202ENST00000598197 ABCA9Q8IUA7 1624 aa6.72□□□□□ -1.33
USP29-202ENST00000598197 VWDEQ8N2E2 1590 aa6.72□□□□□ -1.33
USP29-202ENST00000598197 ARID4BQ4LE39 1312 aaPredicted RBP6.72□□□□□ -1.33
USP29-202ENST00000598197 PLEKHH2Q8IVE3 1493 aa6.72□□□□□ -1.33
USP29-202ENST00000598197 ZCCHC11Q5TAX3 1644 aaKnown RBP6.72□□□□□ -1.33
USP29-202ENST00000598197 TTC37Q6PGP7 1564 aa6.72□□□□□ -1.33
USP29-202ENST00000598197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.71□□□□□ -1.33
USP29-202ENST00000598197 IFT172Q9UG01 1749 aa6.71□□□□□ -1.33
USP29-202ENST00000598197 CNTLNQ9NXG0 1405 aa6.71□□□□□ -1.34
USP29-202ENST00000598197 SPHKAPQ2M3C7 1700 aa6.71□□□□□ -1.34
USP29-202ENST00000598197 TONSLQ96HA7 1378 aa6.7□□□□□ -1.34
USP29-202ENST00000598197 INO80Q9ULG1 1556 aaPredicted RBP6.7□□□□□ -1.34
USP29-202ENST00000598197 ABCC1P33527 1531 aa6.7□□□□□ -1.34
USP29-202ENST00000598197 IQGAP1P46940 1657 aa6.7□□□□□ -1.34
USP29-202ENST00000598197 CCDC141Q6ZP82 1450 aa6.7□□□□□ -1.34
USP29-202ENST00000598197 FAM50AQ14320 339 aaKnown RBP6.69□□□□□ -1.34
USP29-202ENST00000598197 PRDM15P57071 1507 aaPredicted RBP6.69□□□□□ -1.34
USP29-202ENST00000598197 PRG4Q92954 1404 aaPredicted RBP6.69□□□□□ -1.34
USP29-202ENST00000598197 INSRP06213 1382 aa6.69□□□□□ -1.34
USP29-202ENST00000598197 DUOX2Q9NRD8 1548 aa6.69□□□□□ -1.34
USP29-202ENST00000598197 ERBINQ96RT1 1412 aa6.68□□□□□ -1.34
USP29-202ENST00000598197 RANGAP1P46060 587 aaPredicted RBP6.68□□□□□ -1.34
USP29-202ENST00000598197 CDK11AQ9UQ88 783 aaPredicted RBP6.68□□□□□ -1.34
USP29-202ENST00000598197 FAM135AQ9P2D6 1515 aa6.68□□□□□ -1.34
USP29-202ENST00000598197 C9orf84Q5VXU9 1444 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms