RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 PLCH2O75038 1416 aa27.57■■■□□ 2
C19orf54-207ENST00000597507 CDK13Q14004 1512 aaKnown RBP27.57■■■□□ 2
C19orf54-207ENST00000597507 CEBPAP49715 358 aaPredicted RBP27.54■■■□□ 2
C19orf54-207ENST00000597507 ARHGEF12Q9NZN5 1544 aa27.53■■■□□ 2
C19orf54-207ENST00000597507 ATP10AO60312 1499 aa27.53■■■□□ 2
C19orf54-207ENST00000597507 EEA1Q15075 1411 aa27.51■■□□□ 1.99
C19orf54-207ENST00000597507 PREX1Q8TCU6 1659 aa27.49■■□□□ 1.99
C19orf54-207ENST00000597507 C9orf84Q5VXU9 1444 aa27.48■■□□□ 1.99
C19orf54-207ENST00000597507 STRCQ7RTU9 1775 aa27.46■■□□□ 1.99
C19orf54-207ENST00000597507 EFCAB2Q5VUJ9 269 aa27.46■■□□□ 1.99
C19orf54-207ENST00000597507 ILDR2Q71H61 639 aa27.44■■□□□ 1.98
C19orf54-207ENST00000597507 SETD1BQ9UPS6 1966 aaKnown RBP27.42■■□□□ 1.98
C19orf54-207ENST00000597507 MYO5CQ9NQX4 1742 aa27.42■■□□□ 1.98
C19orf54-207ENST00000597507 ATP1B4Q9UN42 357 aaPredicted RBP27.42■■□□□ 1.98
C19orf54-207ENST00000597507 AFAP1Q8N556 730 aa27.4■■□□□ 1.98
C19orf54-207ENST00000597507 DMRT2Q9Y5R5 561 aa27.4■■□□□ 1.98
C19orf54-207ENST00000597507 DISP3Q9P2K9 1392 aa27.39■■□□□ 1.98
C19orf54-207ENST00000597507 KIF14Q15058 1648 aa27.36■■□□□ 1.97
C19orf54-207ENST00000597507 ZNF518AQ6AHZ1 1483 aa27.35■■□□□ 1.97
C19orf54-207ENST00000597507 UHRF1BP1Q6BDS2 1440 aa27.34■■□□□ 1.97
C19orf54-207ENST00000597507 CDK11AQ9UQ88 783 aaPredicted RBP27.33■■□□□ 1.97
C19orf54-207ENST00000597507 KDM5CP41229 1560 aa27.32■■□□□ 1.96
C19orf54-207ENST00000597507 SOCS7O14512 581 aa27.3■■□□□ 1.96
C19orf54-207ENST00000597507 EHMT2Q96KQ7 1210 aa27.3■■□□□ 1.96
C19orf54-207ENST00000597507 MYT1LQ9UL68 1186 aa27.3■■□□□ 1.96
C19orf54-207ENST00000597507 FMN1Q68DA7 1419 aa27.3■■□□□ 1.96
C19orf54-207ENST00000597507 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
C19orf54-207ENST00000597507 DIP2CQ9Y2E4 1556 aa27.29■■□□□ 1.96
C19orf54-207ENST00000597507 TROQ12816 1431 aaPredicted RBP27.27■■□□□ 1.96
C19orf54-207ENST00000597507 C3P01024 1663 aa27.27■■□□□ 1.96
C19orf54-207ENST00000597507 ARHGAP35Q9NRY4 1499 aa27.26■■□□□ 1.95
C19orf54-207ENST00000597507 UBTFP17480 764 aaKnown RBP27.26■■□□□ 1.95
C19orf54-207ENST00000597507 PTPRTO14522 1441 aa27.25■■□□□ 1.95
C19orf54-207ENST00000597507 REREQ9P2R6 1566 aa27.24■■□□□ 1.95
C19orf54-207ENST00000597507 CDC42BPBQ9Y5S2 1711 aa27.24■■□□□ 1.95
C19orf54-207ENST00000597507 ABCA6Q8N139 1617 aa27.23■■□□□ 1.95
C19orf54-207ENST00000597507 MLH3Q9UHC1 1453 aa27.22■■□□□ 1.95
C19orf54-207ENST00000597507 LRRIQ1Q96JM4 1722 aa27.21■■□□□ 1.95
C19orf54-207ENST00000597507 LTBP4Q8N2S1 1624 aa27.19■■□□□ 1.94
C19orf54-207ENST00000597507 TRAPPC8Q9Y2L5 1435 aa27.19■■□□□ 1.94
C19orf54-207ENST00000597507 CLIP1P30622 1438 aa27.18■■□□□ 1.94
C19orf54-207ENST00000597507 AGLP35573 1532 aa27.17■■□□□ 1.94
C19orf54-207ENST00000597507 ESF1Q9H501 851 aaKnown RBP27.17■■□□□ 1.94
C19orf54-207ENST00000597507 SPATA31D1Q6ZQQ2 1576 aa27.14■■□□□ 1.94
C19orf54-207ENST00000597507 ABCC1P33527 1531 aa27.12■■□□□ 1.93
C19orf54-207ENST00000597507 KIDINS220Q9ULH0 1771 aa27.12■■□□□ 1.93
C19orf54-207ENST00000597507 NCOA1Q15788 1441 aa27.11■■□□□ 1.93
C19orf54-207ENST00000597507 PREX2Q70Z35 1606 aa27.1■■□□□ 1.93
C19orf54-207ENST00000597507 ITSN2Q9NZM3 1697 aa27.1■■□□□ 1.93
C19orf54-207ENST00000597507 CNTLNQ9NXG0 1405 aa27.07■■□□□ 1.92
C19orf54-207ENST00000597507 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
C19orf54-207ENST00000597507 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
C19orf54-207ENST00000597507 CDC42BPAQ5VT25 1732 aa27.03■■□□□ 1.92
C19orf54-207ENST00000597507 ZMYM3Q14202 1370 aa27.01■■□□□ 1.91
C19orf54-207ENST00000597507 NCKAP5LQ9HCH0 1330 aa27.01■■□□□ 1.91
C19orf54-207ENST00000597507 NPATQ14207 1427 aa27■■□□□ 1.91
C19orf54-207ENST00000597507 MROH2AA6NES4 1674 aa26.98■■□□□ 1.91
C19orf54-207ENST00000597507 SAMD9LQ8IVG5 1584 aa26.98■■□□□ 1.91
C19orf54-207ENST00000597507 ZNF335Q9H4Z2 1342 aaPredicted RBP26.97■■□□□ 1.91
C19orf54-207ENST00000597507 ZNF777Q9ULD5 760 aaPredicted RBP26.97■■□□□ 1.91
C19orf54-207ENST00000597507 CASKIN1Q8WXD9 1431 aa26.97■■□□□ 1.91
C19orf54-207ENST00000597507 CCDC18Q5T9S5 1454 aa26.96■■□□□ 1.91
C19orf54-207ENST00000597507 SUPT6HQ7KZ85 1726 aaKnown RBP26.95■■□□□ 1.9
C19orf54-207ENST00000597507 HNRNPMP52272 730 aaKnown RBP eCLIP26.93■■□□□ 1.9
C19orf54-207ENST00000597507 SPAG9O60271 1321 aaKnown RBP26.92■■□□□ 1.9
C19orf54-207ENST00000597507 UBAP1LF5GYI3 381 aa26.92■■□□□ 1.9
C19orf54-207ENST00000597507 CLTCQ00610 1675 aaKnown RBP26.9■■□□□ 1.9
C19orf54-207ENST00000597507 SYCP2Q9BX26 1530 aa26.9■■□□□ 1.9
C19orf54-207ENST00000597507 GPATCH8Q9UKJ3 1502 aaKnown RBP26.89■■□□□ 1.89
C19orf54-207ENST00000597507 PKD2Q13563 968 aa26.87■■□□□ 1.89
C19orf54-207ENST00000597507 PTPRKQ15262 1439 aa26.86■■□□□ 1.89
C19orf54-207ENST00000597507 MYO3AQ8NEV4 1616 aa26.86■■□□□ 1.89
C19orf54-207ENST00000597507 ZNF142P52746 1687 aaPredicted RBP26.85■■□□□ 1.89
C19orf54-207ENST00000597507 PLA2R1Q13018 1463 aa26.85■■□□□ 1.89
C19orf54-207ENST00000597507 TCOF1Q13428 1488 aaKnown RBP26.84■■□□□ 1.89
C19orf54-207ENST00000597507 ATP7AQ04656 1500 aa26.84■■□□□ 1.89
C19orf54-207ENST00000597507 GGT6Q6P531 493 aa26.83■■□□□ 1.89
C19orf54-207ENST00000597507 PLXNC1O60486 1568 aa26.83■■□□□ 1.89
C19orf54-207ENST00000597507 CEP170BQ9Y4F5 1589 aaPredicted RBP26.83■■□□□ 1.89
C19orf54-207ENST00000597507 A2MP01023 1474 aa26.82■■□□□ 1.88
C19orf54-207ENST00000597507 CHIC1Q5VXU3 224 aa26.82■■□□□ 1.88
C19orf54-207ENST00000597507 INO80Q9ULG1 1556 aaPredicted RBP26.8■■□□□ 1.88
C19orf54-207ENST00000597507 KIAA1107Q9UPP5 1409 aa26.8■■□□□ 1.88
C19orf54-207ENST00000597507 FYCO1Q9BQS8 1478 aa26.8■■□□□ 1.88
C19orf54-207ENST00000597507 CFDP1Q9UEE9 299 aaPredicted RBP26.78■■□□□ 1.88
C19orf54-207ENST00000597507 PPP6R1Q9UPN7 881 aa26.77■■□□□ 1.88
C19orf54-207ENST00000597507 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
C19orf54-207ENST00000597507 CCNB3Q8WWL7 1395 aa26.71■■□□□ 1.87
C19orf54-207ENST00000597507 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
C19orf54-207ENST00000597507 A2ML1A8K2U0 1454 aa26.7■■□□□ 1.87
C19orf54-207ENST00000597507 HSPA1LP34931 641 aa26.7■■□□□ 1.86
C19orf54-207ENST00000597507 ADGBQ8N7X0 1667 aa26.7■■□□□ 1.86
C19orf54-207ENST00000597507 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
C19orf54-207ENST00000597507 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
C19orf54-207ENST00000597507 PIP4K2BP78356 416 aa26.67■■□□□ 1.86
C19orf54-207ENST00000597507 FBXO31Q5XUX0 539 aaPredicted RBP26.65■■□□□ 1.86
C19orf54-207ENST00000597507 NEURL4Q96JN8 1562 aa26.63■■□□□ 1.85
C19orf54-207ENST00000597507 MBD5Q9P267 1494 aa26.62■■□□□ 1.85
C19orf54-207ENST00000597507 TOM1O60784 492 aa26.62■■□□□ 1.85
C19orf54-207ENST00000597507 MED1Q15648 1581 aaPredicted RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms