RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 SMG6Q86US8 1419 aaKnown RBP17.12■□□□□ 0.33
ZNF558-205ENST00000597304 KIF7Q2M1P5 1343 aa17.11■□□□□ 0.33
ZNF558-205ENST00000597304 RPRD2Q5VT52 1461 aaKnown RBP17.11■□□□□ 0.33
ZNF558-205ENST00000597304 TEX14Q8IWB6 1497 aa17.1■□□□□ 0.33
ZNF558-205ENST00000597304 NBR1Q14596 966 aa17.09■□□□□ 0.33
ZNF558-205ENST00000597304 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
ZNF558-205ENST00000597304 MIA2Q96PC5 1412 aa17.09■□□□□ 0.33
ZNF558-205ENST00000597304 FOXD1Q16676 465 aa17.09■□□□□ 0.33
ZNF558-205ENST00000597304 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.33
ZNF558-205ENST00000597304 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.33
ZNF558-205ENST00000597304 ANKRD30BQ9BXX2 1392 aa17.07■□□□□ 0.32
ZNF558-205ENST00000597304 ANP32AP39687 249 aaKnown RBP17.07■□□□□ 0.32
ZNF558-205ENST00000597304 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
ZNF558-205ENST00000597304 CCDC136Q96JN2 1154 aa17.06■□□□□ 0.32
ZNF558-205ENST00000597304 NESP48681 1621 aa17.05■□□□□ 0.32
ZNF558-205ENST00000597304 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
ZNF558-205ENST00000597304 RNF123Q5XPI4 1314 aa17.05■□□□□ 0.32
ZNF558-205ENST00000597304 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
ZNF558-205ENST00000597304 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
ZNF558-205ENST00000597304 EPRSP07814 1512 aaKnown RBP17.03■□□□□ 0.32
ZNF558-205ENST00000597304 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
ZNF558-205ENST00000597304 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
ZNF558-205ENST00000597304 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
ZNF558-205ENST00000597304 DHX29Q7Z478 1369 aaKnown RBP17.01■□□□□ 0.31
ZNF558-205ENST00000597304 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
ZNF558-205ENST00000597304 DAPK1P53355 1430 aa16.99■□□□□ 0.31
ZNF558-205ENST00000597304 CDK13Q14004 1512 aaKnown RBP16.99■□□□□ 0.31
ZNF558-205ENST00000597304 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
ZNF558-205ENST00000597304 DNMT1P26358 1616 aaKnown RBP16.98■□□□□ 0.31
ZNF558-205ENST00000597304 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
ZNF558-205ENST00000597304 BCORL1Q5H9F3 1711 aa16.96■□□□□ 0.3
ZNF558-205ENST00000597304 WDR62O43379 1518 aa16.95■□□□□ 0.3
ZNF558-205ENST00000597304 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
ZNF558-205ENST00000597304 USP47Q96K76 1375 aa16.93■□□□□ 0.3
ZNF558-205ENST00000597304 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
ZNF558-205ENST00000597304 ABCC5O15440 1437 aa16.93■□□□□ 0.3
ZNF558-205ENST00000597304 IQGAP2Q13576 1575 aa16.93■□□□□ 0.3
ZNF558-205ENST00000597304 POLR3GLQ9BT43 218 aa16.93■□□□□ 0.3
ZNF558-205ENST00000597304 KIF14Q15058 1648 aa16.92■□□□□ 0.3
ZNF558-205ENST00000597304 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
ZNF558-205ENST00000597304 KDM5CP41229 1560 aa16.9■□□□□ 0.3
ZNF558-205ENST00000597304 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
ZNF558-205ENST00000597304 PZPP20742 1482 aa16.89■□□□□ 0.29
ZNF558-205ENST00000597304 TMC1Q8TDI8 760 aa16.89■□□□□ 0.29
ZNF558-205ENST00000597304 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
ZNF558-205ENST00000597304 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
ZNF558-205ENST00000597304 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
ZNF558-205ENST00000597304 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
ZNF558-205ENST00000597304 ZNF326Q5BKZ1 582 aaKnown RBP16.85■□□□□ 0.29
ZNF558-205ENST00000597304 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
ZNF558-205ENST00000597304 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
ZNF558-205ENST00000597304 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
ZNF558-205ENST00000597304 KIF15Q9NS87 1388 aa16.84■□□□□ 0.29
ZNF558-205ENST00000597304 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
ZNF558-205ENST00000597304 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
ZNF558-205ENST00000597304 RRP1P56182 461 aaKnown RBP16.83■□□□□ 0.29
ZNF558-205ENST00000597304 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
ZNF558-205ENST00000597304 NPM2Q86SE8 214 aaKnown RBP16.82■□□□□ 0.28
ZNF558-205ENST00000597304 BRD4O60885 1362 aaPredicted RBP16.81■□□□□ 0.28
ZNF558-205ENST00000597304 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
ZNF558-205ENST00000597304 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
ZNF558-205ENST00000597304 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
ZNF558-205ENST00000597304 MYBBP1AQ9BQG0 1328 aaKnown RBP16.8■□□□□ 0.28
ZNF558-205ENST00000597304 EXOC6Q8TAG9 804 aa16.79■□□□□ 0.28
ZNF558-205ENST00000597304 UHRF1BP1Q6BDS2 1440 aa16.78■□□□□ 0.28
ZNF558-205ENST00000597304 CAMSAP2Q08AD1 1489 aa16.78■□□□□ 0.28
ZNF558-205ENST00000597304 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
ZNF558-205ENST00000597304 PDE4AP27815 886 aa16.78■□□□□ 0.28
ZNF558-205ENST00000597304 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
ZNF558-205ENST00000597304 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
ZNF558-205ENST00000597304 RALBP1Q15311 655 aa16.77■□□□□ 0.28
ZNF558-205ENST00000597304 ITSN2Q9NZM3 1697 aa16.77■□□□□ 0.28
ZNF558-205ENST00000597304 E9PCH4 1651 aa16.77■□□□□ 0.27
ZNF558-205ENST00000597304 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
ZNF558-205ENST00000597304 PKD2Q13563 968 aa16.76■□□□□ 0.27
ZNF558-205ENST00000597304 MS4A1P11836 297 aa16.76■□□□□ 0.27
ZNF558-205ENST00000597304 NUP153P49790 1475 aaKnown RBP16.76■□□□□ 0.27
ZNF558-205ENST00000597304 NEFMP07197 916 aa16.75■□□□□ 0.27
ZNF558-205ENST00000597304 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
ZNF558-205ENST00000597304 ADGRL2O95490 1459 aa16.75■□□□□ 0.27
ZNF558-205ENST00000597304 RAPGEF6Q8TEU7 1601 aa16.75■□□□□ 0.27
ZNF558-205ENST00000597304 BACH2Q9BYV9 841 aa16.75■□□□□ 0.27
ZNF558-205ENST00000597304 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
ZNF558-205ENST00000597304 KIAA0556O60303 1618 aa16.75■□□□□ 0.27
ZNF558-205ENST00000597304 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
ZNF558-205ENST00000597304 PRKCSHP14314 528 aaPredicted RBP16.73■□□□□ 0.27
ZNF558-205ENST00000597304 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
ZNF558-205ENST00000597304 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
ZNF558-205ENST00000597304 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
ZNF558-205ENST00000597304 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
ZNF558-205ENST00000597304 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
ZNF558-205ENST00000597304 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
ZNF558-205ENST00000597304 ST20-MTHFSA0A0A6YYL1 179 aa16.69■□□□□ 0.26
ZNF558-205ENST00000597304 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
ZNF558-205ENST00000597304 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
ZNF558-205ENST00000597304 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
ZNF558-205ENST00000597304 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
ZNF558-205ENST00000597304 ANKRD50Q9ULJ7 1429 aa16.68■□□□□ 0.26
ZNF558-205ENST00000597304 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
ZNF558-205ENST00000597304 GPATCH8Q9UKJ3 1502 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms