RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
MCM3-205ENST00000596288 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
MCM3-205ENST00000596288 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
MCM3-205ENST00000596288 DAPK1P53355 1430 aa12.54□□□□□ -0.4
MCM3-205ENST00000596288 CHIC2Q9UKJ5 165 aa12.54□□□□□ -0.4
MCM3-205ENST00000596288 RAPGEF6Q8TEU7 1601 aa12.54□□□□□ -0.4
MCM3-205ENST00000596288 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
MCM3-205ENST00000596288 ROCK1Q13464 1354 aa12.53□□□□□ -0.4
MCM3-205ENST00000596288 NBR1Q14596 966 aa12.53□□□□□ -0.4
MCM3-205ENST00000596288 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
MCM3-205ENST00000596288 ABCC5O15440 1437 aa12.53□□□□□ -0.4
MCM3-205ENST00000596288 ANP32CO43423 234 aa12.52□□□□□ -0.41
MCM3-205ENST00000596288 TEX14Q8IWB6 1497 aa12.51□□□□□ -0.41
MCM3-205ENST00000596288 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
MCM3-205ENST00000596288 WASHC2AQ641Q2 1341 aa12.51□□□□□ -0.41
MCM3-205ENST00000596288 MPHOSPH9Q99550 1183 aa12.51□□□□□ -0.41
MCM3-205ENST00000596288 NEFLP07196 543 aa12.51□□□□□ -0.41
MCM3-205ENST00000596288 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
MCM3-205ENST00000596288 ANKRD30BQ9BXX2 1392 aa12.5□□□□□ -0.41
MCM3-205ENST00000596288 RPRD2Q5VT52 1461 aaKnown RBP12.5□□□□□ -0.41
MCM3-205ENST00000596288 CEP170Q5SW79 1584 aa12.49□□□□□ -0.41
MCM3-205ENST00000596288 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
MCM3-205ENST00000596288 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
MCM3-205ENST00000596288 ZNF644Q9H582 1327 aaPredicted RBP12.48□□□□□ -0.41
MCM3-205ENST00000596288 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
MCM3-205ENST00000596288 FOXD1Q16676 465 aa12.46□□□□□ -0.41
MCM3-205ENST00000596288 L3MBTL2Q969R5 705 aa12.46□□□□□ -0.41
MCM3-205ENST00000596288 NCOA1Q15788 1441 aa12.46□□□□□ -0.41
MCM3-205ENST00000596288 MSH5O43196 834 aa12.46□□□□□ -0.42
MCM3-205ENST00000596288 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.42
MCM3-205ENST00000596288 KIF14Q15058 1648 aa12.46□□□□□ -0.42
MCM3-205ENST00000596288 PZPP20742 1482 aa12.45□□□□□ -0.42
MCM3-205ENST00000596288 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
MCM3-205ENST00000596288 SPATA31E1Q6ZUB1 1445 aa12.45□□□□□ -0.42
MCM3-205ENST00000596288 ADGBQ8N7X0 1667 aa12.45□□□□□ -0.42
MCM3-205ENST00000596288 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
MCM3-205ENST00000596288 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
MCM3-205ENST00000596288 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
MCM3-205ENST00000596288 TROQ12816 1431 aaPredicted RBP12.44□□□□□ -0.42
MCM3-205ENST00000596288 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
MCM3-205ENST00000596288 C11orf95C9JLR9 678 aaPredicted RBP12.44□□□□□ -0.42
MCM3-205ENST00000596288 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
MCM3-205ENST00000596288 CNTLNQ9NXG0 1405 aa12.44□□□□□ -0.42
MCM3-205ENST00000596288 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
MCM3-205ENST00000596288 GPATCH8Q9UKJ3 1502 aaKnown RBP12.43□□□□□ -0.42
MCM3-205ENST00000596288 ADGRL2O95490 1459 aa12.43□□□□□ -0.42
MCM3-205ENST00000596288 NBPF8Q3BBV2 869 aa12.43□□□□□ -0.42
MCM3-205ENST00000596288 MBD5Q9P267 1494 aa12.43□□□□□ -0.42
MCM3-205ENST00000596288 SYNJ2O15056 1496 aa12.42□□□□□ -0.42
MCM3-205ENST00000596288 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
MCM3-205ENST00000596288 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
MCM3-205ENST00000596288 CCDC7Q96M83 1385 aa12.41□□□□□ -0.42
MCM3-205ENST00000596288 NUP160Q12769 1436 aa12.41□□□□□ -0.42
MCM3-205ENST00000596288 ZNF326Q5BKZ1 582 aaKnown RBP12.39□□□□□ -0.43
MCM3-205ENST00000596288 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
MCM3-205ENST00000596288 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
MCM3-205ENST00000596288 CDC42BPAQ5VT25 1732 aa12.38□□□□□ -0.43
MCM3-205ENST00000596288 ABCA8O94911 1581 aa12.38□□□□□ -0.43
MCM3-205ENST00000596288 ABCC10Q5T3U5 1492 aa12.36□□□□□ -0.43
MCM3-205ENST00000596288 BCORL1Q5H9F3 1711 aa12.35□□□□□ -0.43
MCM3-205ENST00000596288 CDK11AQ9UQ88 783 aaPredicted RBP12.35□□□□□ -0.43
MCM3-205ENST00000596288 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
MCM3-205ENST00000596288 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
MCM3-205ENST00000596288 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
MCM3-205ENST00000596288 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
MCM3-205ENST00000596288 KIF7Q2M1P5 1343 aa12.34□□□□□ -0.43
MCM3-205ENST00000596288 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
MCM3-205ENST00000596288 SHANK2Q9UPX8 1470 aa12.33□□□□□ -0.44
MCM3-205ENST00000596288 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.44
MCM3-205ENST00000596288 KDM5CP41229 1560 aa12.32□□□□□ -0.44
MCM3-205ENST00000596288 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
MCM3-205ENST00000596288 ATP10BO94823 1461 aa12.32□□□□□ -0.44
MCM3-205ENST00000596288 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
MCM3-205ENST00000596288 DHX29Q7Z478 1369 aaKnown RBP12.31□□□□□ -0.44
MCM3-205ENST00000596288 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
MCM3-205ENST00000596288 CARMIL2Q6F5E8 1435 aa12.3□□□□□ -0.44
MCM3-205ENST00000596288 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
MCM3-205ENST00000596288 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
MCM3-205ENST00000596288 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
MCM3-205ENST00000596288 UHRF1BP1Q6BDS2 1440 aa12.29□□□□□ -0.44
MCM3-205ENST00000596288 PTPRGP23470 1445 aa12.28□□□□□ -0.44
MCM3-205ENST00000596288 ANKRD30AQ9BXX3 1397 aa12.28□□□□□ -0.44
MCM3-205ENST00000596288 ARHGEF5Q12774 1597 aa12.27□□□□□ -0.44
MCM3-205ENST00000596288 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
MCM3-205ENST00000596288 ARHGEF12Q9NZN5 1544 aa12.26□□□□□ -0.45
MCM3-205ENST00000596288 RALGAPBQ86X10 1494 aa12.26□□□□□ -0.45
MCM3-205ENST00000596288 PKD2Q13563 968 aa12.26□□□□□ -0.45
MCM3-205ENST00000596288 USP47Q96K76 1375 aa12.25□□□□□ -0.45
MCM3-205ENST00000596288 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
MCM3-205ENST00000596288 SAMD9LQ8IVG5 1584 aa12.25□□□□□ -0.45
MCM3-205ENST00000596288 ZBED9Q6R2W3 1325 aa12.25□□□□□ -0.45
MCM3-205ENST00000596288 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
MCM3-205ENST00000596288 PREX2Q70Z35 1606 aa12.23□□□□□ -0.45
MCM3-205ENST00000596288 NPM2Q86SE8 214 aaKnown RBP12.22□□□□□ -0.45
MCM3-205ENST00000596288 MRS2Q9HD23 443 aa12.22□□□□□ -0.45
MCM3-205ENST00000596288 EIF5BO60841 1220 aaKnown RBP12.22□□□□□ -0.45
MCM3-205ENST00000596288 E9PCH4 1651 aa12.22□□□□□ -0.45
MCM3-205ENST00000596288 FBLN2P98095 1184 aa12.22□□□□□ -0.45
MCM3-205ENST00000596288 NUP155O75694 1391 aa12.21□□□□□ -0.46
MCM3-205ENST00000596288 PLEKHD1A6NEE1 506 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms