RNA–Protein interactions for RNA: ENST00000595313.5

SOX2-OT-224, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 716 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-224ENST00000595313 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
SOX2-OT-224ENST00000595313 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
SOX2-OT-224ENST00000595313 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
SOX2-OT-224ENST00000595313 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-224ENST00000595313 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
SOX2-OT-224ENST00000595313 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
SOX2-OT-224ENST00000595313 C2orf72A6NCS6 295 aa11.88□□□□□ -0.51
SOX2-OT-224ENST00000595313 PDE4AP27815 886 aa11.86□□□□□ -0.51
SOX2-OT-224ENST00000595313 TMC2Q8TDI7 906 aa11.85□□□□□ -0.51
SOX2-OT-224ENST00000595313 FOXK1P85037 733 aa11.83□□□□□ -0.52
SOX2-OT-224ENST00000595313 MFSD10Q14728 455 aa11.82□□□□□ -0.52
SOX2-OT-224ENST00000595313 DSG2Q14126 1118 aa11.79□□□□□ -0.52
SOX2-OT-224ENST00000595313 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-224ENST00000595313 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
SOX2-OT-224ENST00000595313 SNPHO15079 494 aa11.75□□□□□ -0.53
SOX2-OT-224ENST00000595313 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-224ENST00000595313 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
SOX2-OT-224ENST00000595313 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-224ENST00000595313 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
SOX2-OT-224ENST00000595313 SLC34A2O95436 690 aa11.73□□□□□ -0.53
SOX2-OT-224ENST00000595313 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
SOX2-OT-224ENST00000595313 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
SOX2-OT-224ENST00000595313 KDM2AQ9Y2K7 1162 aa11.69□□□□□ -0.54
SOX2-OT-224ENST00000595313 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
SOX2-OT-224ENST00000595313 PTCD2Q8WV60 388 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-224ENST00000595313 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
SOX2-OT-224ENST00000595313 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
SOX2-OT-224ENST00000595313 ST18O60284 1047 aa11.64□□□□□ -0.55
SOX2-OT-224ENST00000595313 GPR153Q6NV75 609 aa11.64□□□□□ -0.55
SOX2-OT-224ENST00000595313 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
SOX2-OT-224ENST00000595313 WDR70Q9NW82 654 aa11.64□□□□□ -0.55
SOX2-OT-224ENST00000595313 OXER1Q8TDS5 423 aa11.63□□□□□ -0.55
SOX2-OT-224ENST00000595313 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
SOX2-OT-224ENST00000595313 RIMBP2O15034 1052 aa11.61□□□□□ -0.55
SOX2-OT-224ENST00000595313 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
SOX2-OT-224ENST00000595313 E2F4Q16254 413 aa11.61□□□□□ -0.55
SOX2-OT-224ENST00000595313 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
SOX2-OT-224ENST00000595313 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
SOX2-OT-224ENST00000595313 KDM4FA0A1W2PPD8 638 aa11.59□□□□□ -0.55
SOX2-OT-224ENST00000595313 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-224ENST00000595313 ARSIQ5FYB1 569 aa11.57□□□□□ -0.56
SOX2-OT-224ENST00000595313 TBC1D12O60347 775 aa11.55□□□□□ -0.56
SOX2-OT-224ENST00000595313 KHSRPQ92945 711 aaKnown RBP eCLIP11.53□□□□□ -0.56
SOX2-OT-224ENST00000595313 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
SOX2-OT-224ENST00000595313 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.57
SOX2-OT-224ENST00000595313 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
SOX2-OT-224ENST00000595313 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
SOX2-OT-224ENST00000595313 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
SOX2-OT-224ENST00000595313 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
SOX2-OT-224ENST00000595313 NUDT7P0C024 238 aa11.49□□□□□ -0.57
SOX2-OT-224ENST00000595313 DPYSL4O14531 572 aa11.48□□□□□ -0.57
SOX2-OT-224ENST00000595313 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
SOX2-OT-224ENST00000595313 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
SOX2-OT-224ENST00000595313 EVI5O60447 810 aa11.46□□□□□ -0.57
SOX2-OT-224ENST00000595313 PDIA6Q15084 440 aa11.45□□□□□ -0.58
SOX2-OT-224ENST00000595313 EMP3P54852 163 aa11.44□□□□□ -0.58
SOX2-OT-224ENST00000595313 ZNF316A6NFI3 1004 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-224ENST00000595313 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-224ENST00000595313 LHX6Q9UPM6 363 aa11.43□□□□□ -0.58
SOX2-OT-224ENST00000595313 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
SOX2-OT-224ENST00000595313 PTGER2P43116 358 aa11.42□□□□□ -0.58
SOX2-OT-224ENST00000595313 POTEBQ6S5H4 581 aa11.42□□□□□ -0.58
SOX2-OT-224ENST00000595313 POTEMA6NI47 508 aa11.4□□□□□ -0.58
SOX2-OT-224ENST00000595313 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
SOX2-OT-224ENST00000595313 ERBB3P21860 1342 aa11.39□□□□□ -0.59
SOX2-OT-224ENST00000595313 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
SOX2-OT-224ENST00000595313 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
SOX2-OT-224ENST00000595313 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
SOX2-OT-224ENST00000595313 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-224ENST00000595313 FOSBP53539 338 aa11.35□□□□□ -0.59
SOX2-OT-224ENST00000595313 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
SOX2-OT-224ENST00000595313 PHF14O94880 888 aa11.32□□□□□ -0.6
SOX2-OT-224ENST00000595313 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
SOX2-OT-224ENST00000595313 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
SOX2-OT-224ENST00000595313 SEMA3EO15041 775 aa11.29□□□□□ -0.6
SOX2-OT-224ENST00000595313 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
SOX2-OT-224ENST00000595313 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
SOX2-OT-224ENST00000595313 DDX12PQ92771 950 aa11.28□□□□□ -0.6
SOX2-OT-224ENST00000595313 POTEEQ6S8J3 1075 aa11.27□□□□□ -0.61
SOX2-OT-224ENST00000595313 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
SOX2-OT-224ENST00000595313 EPAS1Q99814 870 aa11.27□□□□□ -0.61
SOX2-OT-224ENST00000595313 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-224ENST00000595313 OSBPP22059 807 aa11.26□□□□□ -0.61
SOX2-OT-224ENST00000595313 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-224ENST00000595313 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
SOX2-OT-224ENST00000595313 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
SOX2-OT-224ENST00000595313 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
SOX2-OT-224ENST00000595313 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
SOX2-OT-224ENST00000595313 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
SOX2-OT-224ENST00000595313 GRXCR2A6NFK2 248 aa11.23□□□□□ -0.61
SOX2-OT-224ENST00000595313 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
SOX2-OT-224ENST00000595313 PBX2P40425 430 aa11.22□□□□□ -0.61
SOX2-OT-224ENST00000595313 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
SOX2-OT-224ENST00000595313 KRTAP3-3Q9BYR6 98 aa11.21□□□□□ -0.61
SOX2-OT-224ENST00000595313 KRTAP3-2Q9BYR7 98 aa11.21□□□□□ -0.61
SOX2-OT-224ENST00000595313 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
SOX2-OT-224ENST00000595313 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-224ENST00000595313 NBR1Q14596 966 aa11.2□□□□□ -0.62
SOX2-OT-224ENST00000595313 C6orf132Q5T0Z8 1188 aa11.18□□□□□ -0.62
SOX2-OT-224ENST00000595313 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms