RNA–Protein interactions for RNA: ENST00000594107.1

XRCC1-203, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-203ENST00000594107 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
XRCC1-203ENST00000594107 ZMYM4Q5VZL5 1548 aa14.38□□□□□ -0.11
XRCC1-203ENST00000594107 HECW1Q76N89 1606 aa14.37□□□□□ -0.11
XRCC1-203ENST00000594107 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
XRCC1-203ENST00000594107 TTC37Q6PGP7 1564 aa14.36□□□□□ -0.11
XRCC1-203ENST00000594107 PREX1Q8TCU6 1659 aa14.35□□□□□ -0.11
XRCC1-203ENST00000594107 ATP10AO60312 1499 aa14.34□□□□□ -0.11
XRCC1-203ENST00000594107 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
XRCC1-203ENST00000594107 PLCH2O75038 1416 aa14.32□□□□□ -0.12
XRCC1-203ENST00000594107 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
XRCC1-203ENST00000594107 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
XRCC1-203ENST00000594107 MYT1LQ9UL68 1186 aa14.3□□□□□ -0.12
XRCC1-203ENST00000594107 ATP1B4Q9UN42 357 aaPredicted RBP14.3□□□□□ -0.12
XRCC1-203ENST00000594107 SETD1BQ9UPS6 1966 aaKnown RBP14.29□□□□□ -0.12
XRCC1-203ENST00000594107 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
XRCC1-203ENST00000594107 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
XRCC1-203ENST00000594107 UHRF1BP1Q6BDS2 1440 aa14.27□□□□□ -0.12
XRCC1-203ENST00000594107 AFAP1Q8N556 730 aa14.26□□□□□ -0.13
XRCC1-203ENST00000594107 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
XRCC1-203ENST00000594107 ESF1Q9H501 851 aaKnown RBP14.24□□□□□ -0.13
XRCC1-203ENST00000594107 CDK11AQ9UQ88 783 aaPredicted RBP14.24□□□□□ -0.13
XRCC1-203ENST00000594107 PTPRTO14522 1441 aa14.24□□□□□ -0.13
XRCC1-203ENST00000594107 SPATA31D1Q6ZQQ2 1576 aa14.23□□□□□ -0.13
XRCC1-203ENST00000594107 ZNF518AQ6AHZ1 1483 aa14.21□□□□□ -0.13
XRCC1-203ENST00000594107 EEA1Q15075 1411 aa14.2□□□□□ -0.14
XRCC1-203ENST00000594107 C3P01024 1663 aa14.2□□□□□ -0.14
XRCC1-203ENST00000594107 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
XRCC1-203ENST00000594107 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
XRCC1-203ENST00000594107 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
XRCC1-203ENST00000594107 KIF14Q15058 1648 aa14.17□□□□□ -0.14
XRCC1-203ENST00000594107 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
XRCC1-203ENST00000594107 KDM5CP41229 1560 aa14.17□□□□□ -0.14
XRCC1-203ENST00000594107 DIP2CQ9Y2E4 1556 aa14.17□□□□□ -0.14
XRCC1-203ENST00000594107 UBTFP17480 764 aaKnown RBP14.15□□□□□ -0.14
XRCC1-203ENST00000594107 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
XRCC1-203ENST00000594107 REREQ9P2R6 1566 aa14.14□□□□□ -0.15
XRCC1-203ENST00000594107 IQSEC2Q5JU85 1478 aa14.14□□□□□ -0.15
XRCC1-203ENST00000594107 MLH3Q9UHC1 1453 aa14.13□□□□□ -0.15
XRCC1-203ENST00000594107 CDC42BPBQ9Y5S2 1711 aa14.13□□□□□ -0.15
XRCC1-203ENST00000594107 ABCA6Q8N139 1617 aa14.13□□□□□ -0.15
XRCC1-203ENST00000594107 TROQ12816 1431 aaPredicted RBP14.13□□□□□ -0.15
XRCC1-203ENST00000594107 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
XRCC1-203ENST00000594107 CLIP1P30622 1438 aa14.12□□□□□ -0.15
XRCC1-203ENST00000594107 NCKAP5LQ9HCH0 1330 aa14.12□□□□□ -0.15
XRCC1-203ENST00000594107 AGLP35573 1532 aa14.11□□□□□ -0.15
XRCC1-203ENST00000594107 NCOA1Q15788 1441 aa14.11□□□□□ -0.15
XRCC1-203ENST00000594107 CAMSAP1Q5T5Y3 1602 aa14.1□□□□□ -0.15
XRCC1-203ENST00000594107 CNTLNQ9NXG0 1405 aa14.09□□□□□ -0.15
XRCC1-203ENST00000594107 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
XRCC1-203ENST00000594107 ARHGAP35Q9NRY4 1499 aa14.08□□□□□ -0.16
XRCC1-203ENST00000594107 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
XRCC1-203ENST00000594107 LRRIQ1Q96JM4 1722 aa14.07□□□□□ -0.16
XRCC1-203ENST00000594107 KIDINS220Q9ULH0 1771 aa14.07□□□□□ -0.16
XRCC1-203ENST00000594107 ZNF777Q9ULD5 760 aaPredicted RBP14.06□□□□□ -0.16
XRCC1-203ENST00000594107 ITSN2Q9NZM3 1697 aa14.06□□□□□ -0.16
XRCC1-203ENST00000594107 NPATQ14207 1427 aa14.06□□□□□ -0.16
XRCC1-203ENST00000594107 PKD2Q13563 968 aa14.05□□□□□ -0.16
XRCC1-203ENST00000594107 PREX2Q70Z35 1606 aa14.04□□□□□ -0.16
XRCC1-203ENST00000594107 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
XRCC1-203ENST00000594107 ABCC1P33527 1531 aa14.04□□□□□ -0.16
XRCC1-203ENST00000594107 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
XRCC1-203ENST00000594107 HNRNPMP52272 730 aaKnown RBP eCLIP14.02□□□□□ -0.17
XRCC1-203ENST00000594107 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
XRCC1-203ENST00000594107 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
XRCC1-203ENST00000594107 CLTCQ00610 1675 aaKnown RBP14.01□□□□□ -0.17
XRCC1-203ENST00000594107 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
XRCC1-203ENST00000594107 GGT6Q6P531 493 aa14□□□□□ -0.17
XRCC1-203ENST00000594107 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
XRCC1-203ENST00000594107 SAMD9LQ8IVG5 1584 aa14□□□□□ -0.17
XRCC1-203ENST00000594107 PIP4K2BP78356 416 aa13.99□□□□□ -0.17
XRCC1-203ENST00000594107 HSPA1LP34931 641 aa13.98□□□□□ -0.17
XRCC1-203ENST00000594107 PLA2R1Q13018 1463 aa13.98□□□□□ -0.17
XRCC1-203ENST00000594107 TOM1O60784 492 aa13.97□□□□□ -0.17
XRCC1-203ENST00000594107 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
XRCC1-203ENST00000594107 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.17
XRCC1-203ENST00000594107 ZNF142P52746 1687 aaPredicted RBP13.96□□□□□ -0.17
XRCC1-203ENST00000594107 TCOF1Q13428 1488 aaKnown RBP13.96□□□□□ -0.17
XRCC1-203ENST00000594107 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
XRCC1-203ENST00000594107 PTPRKQ15262 1439 aa13.96□□□□□ -0.18
XRCC1-203ENST00000594107 CASKIN1Q8WXD9 1431 aa13.94□□□□□ -0.18
XRCC1-203ENST00000594107 SYCP2Q9BX26 1530 aa13.94□□□□□ -0.18
XRCC1-203ENST00000594107 ATP7AQ04656 1500 aa13.93□□□□□ -0.18
XRCC1-203ENST00000594107 A2MP01023 1474 aa13.93□□□□□ -0.18
XRCC1-203ENST00000594107 MED1Q15648 1581 aaPredicted RBP13.92□□□□□ -0.18
XRCC1-203ENST00000594107 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
XRCC1-203ENST00000594107 CFDP1Q9UEE9 299 aaPredicted RBP13.92□□□□□ -0.18
XRCC1-203ENST00000594107 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
XRCC1-203ENST00000594107 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
XRCC1-203ENST00000594107 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
XRCC1-203ENST00000594107 PLXNC1O60486 1568 aa13.89□□□□□ -0.19
XRCC1-203ENST00000594107 KIAA1107Q9UPP5 1409 aa13.89□□□□□ -0.19
XRCC1-203ENST00000594107 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
XRCC1-203ENST00000594107 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
XRCC1-203ENST00000594107 CPS1P31327 1500 aa13.88□□□□□ -0.19
XRCC1-203ENST00000594107 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
XRCC1-203ENST00000594107 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
XRCC1-203ENST00000594107 PLEKHH2Q8IVE3 1493 aa13.87□□□□□ -0.19
XRCC1-203ENST00000594107 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
XRCC1-203ENST00000594107 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
XRCC1-203ENST00000594107 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms