RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 GOLGA3Q08378 1498 aa23.42■■□□□ 1.34
SYNM-204ENST00000594047 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
SYNM-204ENST00000594047 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
SYNM-204ENST00000594047 B4GALNT3Q6L9W6 998 aa23.41■■□□□ 1.34
SYNM-204ENST00000594047 DDRGK1Q96HY6 314 aa23.4■■□□□ 1.34
SYNM-204ENST00000594047 MEX3CQ5U5Q3 659 aaKnown RBP23.4■■□□□ 1.34
SYNM-204ENST00000594047 HDGFL2Q7Z4V5 671 aaPredicted RBP23.39■■□□□ 1.33
SYNM-204ENST00000594047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.37■■□□□ 1.33
SYNM-204ENST00000594047 TAF7LQ5H9L4 462 aa23.37■■□□□ 1.33
SYNM-204ENST00000594047 NGDNQ8NEJ9 315 aaKnown RBP23.36■■□□□ 1.33
SYNM-204ENST00000594047 RTN4Q9NQC3 1192 aaKnown RBP23.34■■□□□ 1.33
SYNM-204ENST00000594047 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
SYNM-204ENST00000594047 GORABQ5T7V8 394 aa23.34■■□□□ 1.33
SYNM-204ENST00000594047 GOLGA6L4A6NEF3 574 aa23.33■■□□□ 1.33
SYNM-204ENST00000594047 GTF2E1P29083 439 aaPredicted RBP23.33■■□□□ 1.33
SYNM-204ENST00000594047 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
SYNM-204ENST00000594047 KIF3BO15066 747 aa23.31■■□□□ 1.32
SYNM-204ENST00000594047 U2AF1L5P0DN76 240 aaPredicted RBP23.31■■□□□ 1.32
SYNM-204ENST00000594047 U2AF1Q01081 240 aaKnown RBP eCLIP23.31■■□□□ 1.32
SYNM-204ENST00000594047 PKD2Q13563 968 aa23.31■■□□□ 1.32
SYNM-204ENST00000594047 FRAT2O75474 233 aaPredicted RBP23.3■■□□□ 1.32
SYNM-204ENST00000594047 HNRNPMP52272 730 aaKnown RBP eCLIP23.29■■□□□ 1.32
SYNM-204ENST00000594047 SLC4A10Q6U841 1118 aa23.28■■□□□ 1.32
SYNM-204ENST00000594047 NGEFQ8N5V2 710 aa23.28■■□□□ 1.32
SYNM-204ENST00000594047 EID1Q9Y6B2 187 aa23.28■■□□□ 1.32
SYNM-204ENST00000594047 VPS53Q5VIR6 699 aa23.28■■□□□ 1.32
SYNM-204ENST00000594047 CUX2O14529 1486 aa23.28■■□□□ 1.32
SYNM-204ENST00000594047 EVA1CP58658 441 aa23.28■■□□□ 1.32
SYNM-204ENST00000594047 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
SYNM-204ENST00000594047 RAD21O60216 631 aa23.25■■□□□ 1.31
SYNM-204ENST00000594047 ITPRIPQ8IWB1 547 aa23.24■■□□□ 1.31
SYNM-204ENST00000594047 NOL8Q76FK4 1167 aaKnown RBP23.23■■□□□ 1.31
SYNM-204ENST00000594047 DRC7Q8IY82 874 aa23.23■■□□□ 1.31
SYNM-204ENST00000594047 CCDC146Q8IYE0 955 aa23.23■■□□□ 1.31
SYNM-204ENST00000594047 AMPHP49418 695 aa23.23■■□□□ 1.31
SYNM-204ENST00000594047 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
SYNM-204ENST00000594047 TOMM22Q9NS69 142 aa23.22■■□□□ 1.31
SYNM-204ENST00000594047 CREBRFQ8IUR6 639 aa23.22■■□□□ 1.31
SYNM-204ENST00000594047 WWC1Q8IX03 1113 aa23.21■■□□□ 1.31
SYNM-204ENST00000594047 HSP90B1P14625 803 aaKnown RBP23.21■■□□□ 1.31
SYNM-204ENST00000594047 FBXW7Q969H0 707 aa23.21■■□□□ 1.31
SYNM-204ENST00000594047 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.3
SYNM-204ENST00000594047 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
SYNM-204ENST00000594047 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
SYNM-204ENST00000594047 GLIPR1L2Q4G1C9 344 aa23.19■■□□□ 1.3
SYNM-204ENST00000594047 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
SYNM-204ENST00000594047 GOLGA6L6A8MZA4 724 aa23.16■■□□□ 1.3
SYNM-204ENST00000594047 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
SYNM-204ENST00000594047 ROCK2O75116 1388 aaKnown RBP23.16■■□□□ 1.3
SYNM-204ENST00000594047 KIAA1211Q6ZU35 1233 aa23.15■■□□□ 1.3
SYNM-204ENST00000594047 MCCP23508 829 aa23.15■■□□□ 1.3
SYNM-204ENST00000594047 TRIM6-TRIM34B2RNG4 842 aa23.14■■□□□ 1.3
SYNM-204ENST00000594047 TRAK1Q9UPV9 953 aa23.14■■□□□ 1.3
SYNM-204ENST00000594047 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
SYNM-204ENST00000594047 NAP1L5Q96NT1 182 aaPredicted RBP23.13■■□□□ 1.29
SYNM-204ENST00000594047 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
SYNM-204ENST00000594047 SAMD1Q6SPF0 538 aaPredicted RBP23.12■■□□□ 1.29
SYNM-204ENST00000594047 CHMP4BQ9H444 224 aaKnown RBP23.11■■□□□ 1.29
SYNM-204ENST00000594047 FOXD4L1Q9NU39 408 aa23.1■■□□□ 1.29
SYNM-204ENST00000594047 EEA1Q15075 1411 aa23.1■■□□□ 1.29
SYNM-204ENST00000594047 FBXO3Q9UK99 471 aa23.09■■□□□ 1.29
SYNM-204ENST00000594047 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
SYNM-204ENST00000594047 CLUAP1Q96AJ1 413 aa23.09■■□□□ 1.29
SYNM-204ENST00000594047 MS4A1P11836 297 aa23.09■■□□□ 1.29
SYNM-204ENST00000594047 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.29
SYNM-204ENST00000594047 RASSF8Q8NHQ8 419 aa23.08■■□□□ 1.29
SYNM-204ENST00000594047 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
SYNM-204ENST00000594047 NUP155O75694 1391 aa23.08■■□□□ 1.28
SYNM-204ENST00000594047 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
SYNM-204ENST00000594047 EFCAB2Q5VUJ9 269 aa23.07■■□□□ 1.28
SYNM-204ENST00000594047 ARID3AQ99856 593 aa23.07■■□□□ 1.28
SYNM-204ENST00000594047 ELL2O00472 640 aaPredicted RBP23.07■■□□□ 1.28
SYNM-204ENST00000594047 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
SYNM-204ENST00000594047 PPP1R1BQ9UD71 204 aaPredicted RBP23.05■■□□□ 1.28
SYNM-204ENST00000594047 FOXD4L5Q5VV16 416 aaPredicted RBP23.04■■□□□ 1.28
SYNM-204ENST00000594047 FOXD4L4Q8WXT5 416 aaPredicted RBP23.04■■□□□ 1.28
SYNM-204ENST00000594047 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
SYNM-204ENST00000594047 MARCH6O60337 910 aa23.01■■□□□ 1.27
SYNM-204ENST00000594047 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
SYNM-204ENST00000594047 SOGA1O94964 1423 aa23■■□□□ 1.27
SYNM-204ENST00000594047 GZF1Q9H116 711 aaPredicted RBP23■■□□□ 1.27
SYNM-204ENST00000594047 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
SYNM-204ENST00000594047 ANP32EQ9BTT0 268 aa22.99■■□□□ 1.27
SYNM-204ENST00000594047 NOC3LQ8WTT2 800 aaKnown RBP22.99■■□□□ 1.27
SYNM-204ENST00000594047 KTN1Q86UP2 1357 aaKnown RBP22.98■■□□□ 1.27
SYNM-204ENST00000594047 NUTM2GQ5VZR2 741 aa22.98■■□□□ 1.27
SYNM-204ENST00000594047 EIF2S2P20042 333 aaKnown RBP22.97■■□□□ 1.27
SYNM-204ENST00000594047 PPP4R2Q9NY27 417 aa22.97■■□□□ 1.27
SYNM-204ENST00000594047 MFAP1P55081 439 aaKnown RBP22.96■■□□□ 1.27
SYNM-204ENST00000594047 KIAA2012Q0VF49 1180 aa22.95■■□□□ 1.26
SYNM-204ENST00000594047 USP35Q9P2H5 1018 aa22.95■■□□□ 1.26
SYNM-204ENST00000594047 IPO8O15397 1037 aaKnown RBP22.94■■□□□ 1.26
SYNM-204ENST00000594047 NRDCO43847 1150 aa22.93■■□□□ 1.26
SYNM-204ENST00000594047 MINK1Q8N4C8 1332 aaPredicted RBP22.93■■□□□ 1.26
SYNM-204ENST00000594047 ARHGAP35Q9NRY4 1499 aa22.93■■□□□ 1.26
SYNM-204ENST00000594047 C1orf141Q5JVX7 400 aa22.93■■□□□ 1.26
SYNM-204ENST00000594047 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
SYNM-204ENST00000594047 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
SYNM-204ENST00000594047 KRI1Q8N9T8 703 aaKnown RBP22.92■■□□□ 1.26
SYNM-204ENST00000594047 SLKQ9H2G2 1235 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms