RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
RANBP3-230ENST00000593025 MLECQ14165 292 aa18.52■□□□□ 0.56
RANBP3-230ENST00000593025 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
RANBP3-230ENST00000593025 SCAPERQ9BY12 1400 aa18.47■□□□□ 0.55
RANBP3-230ENST00000593025 ATP10AO60312 1499 aa18.46■□□□□ 0.55
RANBP3-230ENST00000593025 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
RANBP3-230ENST00000593025 CEBPAP49715 358 aaPredicted RBP18.46■□□□□ 0.55
RANBP3-230ENST00000593025 C9orf84Q5VXU9 1444 aa18.46■□□□□ 0.55
RANBP3-230ENST00000593025 CDK13Q14004 1512 aaKnown RBP18.45■□□□□ 0.54
RANBP3-230ENST00000593025 LTBP4Q8N2S1 1624 aa18.45■□□□□ 0.54
RANBP3-230ENST00000593025 PLCH2O75038 1416 aa18.44■□□□□ 0.54
RANBP3-230ENST00000593025 C3P01024 1663 aa18.4■□□□□ 0.54
RANBP3-230ENST00000593025 PTPRTO14522 1441 aa18.4■□□□□ 0.54
RANBP3-230ENST00000593025 UHRF1BP1Q6BDS2 1440 aa18.4■□□□□ 0.54
RANBP3-230ENST00000593025 KDM5CP41229 1560 aa18.39■□□□□ 0.53
RANBP3-230ENST00000593025 MYO5CQ9NQX4 1742 aa18.39■□□□□ 0.53
RANBP3-230ENST00000593025 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
RANBP3-230ENST00000593025 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
RANBP3-230ENST00000593025 RANGAP1P46060 587 aaPredicted RBP18.37■□□□□ 0.53
RANBP3-230ENST00000593025 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
RANBP3-230ENST00000593025 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
RANBP3-230ENST00000593025 KIF14Q15058 1648 aa18.36■□□□□ 0.53
RANBP3-230ENST00000593025 REREQ9P2R6 1566 aa18.36■□□□□ 0.53
RANBP3-230ENST00000593025 ABCA6Q8N139 1617 aa18.35■□□□□ 0.53
RANBP3-230ENST00000593025 IQSEC2Q5JU85 1478 aa18.34■□□□□ 0.53
RANBP3-230ENST00000593025 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
RANBP3-230ENST00000593025 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
RANBP3-230ENST00000593025 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
RANBP3-230ENST00000593025 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
RANBP3-230ENST00000593025 AGLP35573 1532 aa18.28■□□□□ 0.52
RANBP3-230ENST00000593025 LRRIQ1Q96JM4 1722 aa18.26■□□□□ 0.51
RANBP3-230ENST00000593025 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
RANBP3-230ENST00000593025 TRAPPC8Q9Y2L5 1435 aa18.25■□□□□ 0.51
RANBP3-230ENST00000593025 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
RANBP3-230ENST00000593025 CDC42BPBQ9Y5S2 1711 aa18.25■□□□□ 0.51
RANBP3-230ENST00000593025 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
RANBP3-230ENST00000593025 ABCC1P33527 1531 aa18.22■□□□□ 0.51
RANBP3-230ENST00000593025 EEA1Q15075 1411 aa18.22■□□□□ 0.51
RANBP3-230ENST00000593025 KIDINS220Q9ULH0 1771 aa18.22■□□□□ 0.51
RANBP3-230ENST00000593025 TROQ12816 1431 aaPredicted RBP18.21■□□□□ 0.51
RANBP3-230ENST00000593025 ITSN2Q9NZM3 1697 aa18.21■□□□□ 0.51
RANBP3-230ENST00000593025 MROH2AA6NES4 1674 aa18.19■□□□□ 0.5
RANBP3-230ENST00000593025 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
RANBP3-230ENST00000593025 ZNF335Q9H4Z2 1342 aaPredicted RBP18.17■□□□□ 0.5
RANBP3-230ENST00000593025 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
RANBP3-230ENST00000593025 ARHGAP35Q9NRY4 1499 aa18.16■□□□□ 0.5
RANBP3-230ENST00000593025 NPATQ14207 1427 aa18.15■□□□□ 0.5
RANBP3-230ENST00000593025 CNTLNQ9NXG0 1405 aa18.15■□□□□ 0.5
RANBP3-230ENST00000593025 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
RANBP3-230ENST00000593025 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
RANBP3-230ENST00000593025 NCKAP5LQ9HCH0 1330 aa18.13■□□□□ 0.49
RANBP3-230ENST00000593025 TCOF1Q13428 1488 aaKnown RBP18.12■□□□□ 0.49
RANBP3-230ENST00000593025 MED1Q15648 1581 aaPredicted RBP18.12■□□□□ 0.49
RANBP3-230ENST00000593025 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
RANBP3-230ENST00000593025 CDC42BPAQ5VT25 1732 aa18.1■□□□□ 0.49
RANBP3-230ENST00000593025 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
RANBP3-230ENST00000593025 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
RANBP3-230ENST00000593025 CLTCQ00610 1675 aaKnown RBP18.09■□□□□ 0.49
RANBP3-230ENST00000593025 SAMD9LQ8IVG5 1584 aa18.09■□□□□ 0.49
RANBP3-230ENST00000593025 CLIP1P30622 1438 aa18.09■□□□□ 0.49
RANBP3-230ENST00000593025 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.49
RANBP3-230ENST00000593025 ATP1B4Q9UN42 357 aaPredicted RBP18.08■□□□□ 0.48
RANBP3-230ENST00000593025 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.48
RANBP3-230ENST00000593025 ZMYM3Q14202 1370 aa18.07■□□□□ 0.48
RANBP3-230ENST00000593025 PLXNC1O60486 1568 aa18.07■□□□□ 0.48
RANBP3-230ENST00000593025 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
RANBP3-230ENST00000593025 ESF1Q9H501 851 aaKnown RBP18.06■□□□□ 0.48
RANBP3-230ENST00000593025 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
RANBP3-230ENST00000593025 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
RANBP3-230ENST00000593025 HSPA1LP34931 641 aa18.02■□□□□ 0.48
RANBP3-230ENST00000593025 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
RANBP3-230ENST00000593025 ALKQ9UM73 1620 aa18.01■□□□□ 0.47
RANBP3-230ENST00000593025 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
RANBP3-230ENST00000593025 PKD2Q13563 968 aa18■□□□□ 0.47
RANBP3-230ENST00000593025 ATP7AQ04656 1500 aa17.99■□□□□ 0.47
RANBP3-230ENST00000593025 DNMT1P26358 1616 aaKnown RBP17.99■□□□□ 0.47
RANBP3-230ENST00000593025 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
RANBP3-230ENST00000593025 A2MP01023 1474 aa17.95■□□□□ 0.46
RANBP3-230ENST00000593025 CCDC18Q5T9S5 1454 aa17.95■□□□□ 0.46
RANBP3-230ENST00000593025 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
RANBP3-230ENST00000593025 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
RANBP3-230ENST00000593025 CASKIN1Q8WXD9 1431 aa17.95■□□□□ 0.46
RANBP3-230ENST00000593025 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
RANBP3-230ENST00000593025 GPATCH8Q9UKJ3 1502 aaKnown RBP17.94■□□□□ 0.46
RANBP3-230ENST00000593025 CPS1P31327 1500 aa17.93■□□□□ 0.46
RANBP3-230ENST00000593025 VWDEQ8N2E2 1590 aa17.93■□□□□ 0.46
RANBP3-230ENST00000593025 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
RANBP3-230ENST00000593025 UBTFP17480 764 aaKnown RBP17.92■□□□□ 0.46
RANBP3-230ENST00000593025 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
RANBP3-230ENST00000593025 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.46
RANBP3-230ENST00000593025 PIP4K2BP78356 416 aa17.9■□□□□ 0.46
RANBP3-230ENST00000593025 ADGBQ8N7X0 1667 aa17.9■□□□□ 0.46
RANBP3-230ENST00000593025 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.46
RANBP3-230ENST00000593025 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
RANBP3-230ENST00000593025 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
RANBP3-230ENST00000593025 GGT6Q6P531 493 aa17.86■□□□□ 0.45
RANBP3-230ENST00000593025 STRCP1A6NGW2 1772 aa17.86■□□□□ 0.45
RANBP3-230ENST00000593025 TOM1O60784 492 aa17.85■□□□□ 0.45
RANBP3-230ENST00000593025 FYCO1Q9BQS8 1478 aa17.85■□□□□ 0.45
RANBP3-230ENST00000593025 PLEKHH2Q8IVE3 1493 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms