RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 STK26Q9P289 416 aa19.04■□□□□ 0.64
RAVER1-204ENST00000592208 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
RAVER1-204ENST00000592208 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
RAVER1-204ENST00000592208 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
RAVER1-204ENST00000592208 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
RAVER1-204ENST00000592208 CASC1Q6TDU7 716 aa19.04■□□□□ 0.64
RAVER1-204ENST00000592208 GOLGA6L22H0YM25 854 aa19.03■□□□□ 0.64
RAVER1-204ENST00000592208 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
RAVER1-204ENST00000592208 NCLP19338 710 aaKnown RBP19.03■□□□□ 0.64
RAVER1-204ENST00000592208 CC2D1BQ5T0F9 858 aaKnown RBP19.03■□□□□ 0.64
RAVER1-204ENST00000592208 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
RAVER1-204ENST00000592208 IGF1RP08069 1367 aa19.01■□□□□ 0.63
RAVER1-204ENST00000592208 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
RAVER1-204ENST00000592208 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
RAVER1-204ENST00000592208 MRC2Q9UBG0 1479 aa19.01■□□□□ 0.63
RAVER1-204ENST00000592208 SOX12O15370 315 aa18.98■□□□□ 0.63
RAVER1-204ENST00000592208 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
RAVER1-204ENST00000592208 U2SURPO15042 1029 aaKnown RBP18.97■□□□□ 0.63
RAVER1-204ENST00000592208 ARXQ96QS3 562 aa18.97■□□□□ 0.63
RAVER1-204ENST00000592208 AQRO60306 1485 aaKnown RBP eCLIP18.95■□□□□ 0.624e-7■■■■■ 32.6
RAVER1-204ENST00000592208 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
RAVER1-204ENST00000592208 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
RAVER1-204ENST00000592208 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
RAVER1-204ENST00000592208 CDK11BP21127 795 aaKnown RBP18.92■□□□□ 0.62
RAVER1-204ENST00000592208 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
RAVER1-204ENST00000592208 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
RAVER1-204ENST00000592208 GRIN2BQ13224 1484 aa18.91■□□□□ 0.62
RAVER1-204ENST00000592208 CFAP44Q96MT7 982 aa18.91■□□□□ 0.62
RAVER1-204ENST00000592208 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.62
RAVER1-204ENST00000592208 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
RAVER1-204ENST00000592208 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
RAVER1-204ENST00000592208 NESP48681 1621 aa18.87■□□□□ 0.61
RAVER1-204ENST00000592208 GLIPR1L2Q4G1C9 344 aa18.86■□□□□ 0.61
RAVER1-204ENST00000592208 ROCK2O75116 1388 aaKnown RBP18.86■□□□□ 0.61
RAVER1-204ENST00000592208 L3MBTL2Q969R5 705 aa18.85■□□□□ 0.61
RAVER1-204ENST00000592208 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
RAVER1-204ENST00000592208 EID1Q9Y6B2 187 aa18.85■□□□□ 0.61
RAVER1-204ENST00000592208 HDGFL2Q7Z4V5 671 aaPredicted RBP18.84■□□□□ 0.61
RAVER1-204ENST00000592208 SUPT16HQ9Y5B9 1047 aaKnown RBP18.84■□□□□ 0.61
RAVER1-204ENST00000592208 ZRSR1Q15695 479 aaKnown RBP18.83■□□□□ 0.6
RAVER1-204ENST00000592208 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
RAVER1-204ENST00000592208 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
RAVER1-204ENST00000592208 FAM69CQ0P6D2 419 aa18.81■□□□□ 0.6
RAVER1-204ENST00000592208 ERICH6BQ5W0A0 696 aa18.8■□□□□ 0.6
RAVER1-204ENST00000592208 NBR1Q14596 966 aa18.8■□□□□ 0.6
RAVER1-204ENST00000592208 RALBP1Q15311 655 aa18.78■□□□□ 0.6
RAVER1-204ENST00000592208 TRIM44Q96DX7 344 aaPredicted RBP18.78■□□□□ 0.6
RAVER1-204ENST00000592208 FRAT1Q92837 279 aaPredicted RBP18.78■□□□□ 0.6
RAVER1-204ENST00000592208 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
RAVER1-204ENST00000592208 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
RAVER1-204ENST00000592208 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
RAVER1-204ENST00000592208 IPO8O15397 1037 aaKnown RBP18.75■□□□□ 0.59
RAVER1-204ENST00000592208 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
RAVER1-204ENST00000592208 OS9Q13438 667 aaPredicted RBP18.72■□□□□ 0.59
RAVER1-204ENST00000592208 RTF1Q92541 710 aaKnown RBP18.72■□□□□ 0.59
RAVER1-204ENST00000592208 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
RAVER1-204ENST00000592208 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
RAVER1-204ENST00000592208 TRAK1Q9UPV9 953 aa18.71■□□□□ 0.59
RAVER1-204ENST00000592208 NUTM2FA1L443 756 aa18.71■□□□□ 0.59
RAVER1-204ENST00000592208 CCDC144AA2RUR9 1427 aa18.7■□□□□ 0.58
RAVER1-204ENST00000592208 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
RAVER1-204ENST00000592208 NPHP1O15259 732 aa18.7■□□□□ 0.58
RAVER1-204ENST00000592208 HDAC5Q9UQL6 1122 aa18.69■□□□□ 0.58
RAVER1-204ENST00000592208 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
RAVER1-204ENST00000592208 CSB-PGBD3P0DP91 1061 aa18.68■□□□□ 0.58
RAVER1-204ENST00000592208 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
RAVER1-204ENST00000592208 NGDNQ8NEJ9 315 aaKnown RBP18.68■□□□□ 0.58
RAVER1-204ENST00000592208 TERF2IPQ9NYB0 399 aa18.68■□□□□ 0.58
RAVER1-204ENST00000592208 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
RAVER1-204ENST00000592208 MCCP23508 829 aa18.66■□□□□ 0.58
RAVER1-204ENST00000592208 VGFO15240 615 aaPredicted RBP18.65■□□□□ 0.58
RAVER1-204ENST00000592208 MYOM3Q5VTT5 1437 aa18.65■□□□□ 0.58
RAVER1-204ENST00000592208 FGD1P98174 961 aa18.64■□□□□ 0.58
RAVER1-204ENST00000592208 RGS3P49796 1198 aa18.64■□□□□ 0.57
RAVER1-204ENST00000592208 KCNJ4P48050 445 aa18.64■□□□□ 0.57
RAVER1-204ENST00000592208 PRG4Q92954 1404 aaPredicted RBP18.64■□□□□ 0.57
RAVER1-204ENST00000592208 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
RAVER1-204ENST00000592208 GOLGA2Q08379 1002 aa18.63■□□□□ 0.57
RAVER1-204ENST00000592208 PTMAP06454 111 aaKnown RBP18.61■□□□□ 0.57
RAVER1-204ENST00000592208 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
RAVER1-204ENST00000592208 ST20-MTHFSA0A0A6YYL1 179 aa18.61■□□□□ 0.57
RAVER1-204ENST00000592208 NRDCO43847 1150 aa18.61■□□□□ 0.57
RAVER1-204ENST00000592208 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
RAVER1-204ENST00000592208 PDE3BQ13370 1112 aa18.6■□□□□ 0.57
RAVER1-204ENST00000592208 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
RAVER1-204ENST00000592208 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
RAVER1-204ENST00000592208 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
RAVER1-204ENST00000592208 AFAP1Q8N556 730 aa18.59■□□□□ 0.57
RAVER1-204ENST00000592208 KIF15Q9NS87 1388 aa18.59■□□□□ 0.57
RAVER1-204ENST00000592208 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.57
RAVER1-204ENST00000592208 GOLGA6L6A8MZA4 724 aa18.58■□□□□ 0.57
RAVER1-204ENST00000592208 FGD6Q6ZV73 1430 aa18.58■□□□□ 0.56
RAVER1-204ENST00000592208 CUX1P39880 1505 aa18.57■□□□□ 0.56
RAVER1-204ENST00000592208 LMOD3Q0VAK6 560 aa18.57■□□□□ 0.56
RAVER1-204ENST00000592208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAVER1-204ENST00000592208 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
RAVER1-204ENST00000592208 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
RAVER1-204ENST00000592208 NLRP13Q86W25 1043 aa18.56■□□□□ 0.56
RAVER1-204ENST00000592208 RWDD1Q9H446 243 aaPredicted RBP18.56■□□□□ 0.56
RAVER1-204ENST00000592208 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms