RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CFDP1Q9UEE9 299 aaPredicted RBP28.32■■■□□ 2.12
MBD3-209ENST00000592012 ATP10BO94823 1461 aa28.32■■■□□ 2.12
MBD3-209ENST00000592012 CHD1O14646 1710 aa28.32■■■□□ 2.12
MBD3-209ENST00000592012 TONSLQ96HA7 1378 aa28.31■■■□□ 2.12
MBD3-209ENST00000592012 DENND4BO75064 1496 aaPredicted RBP28.31■■■□□ 2.12
MBD3-209ENST00000592012 ITSN2Q9NZM3 1697 aa28.31■■■□□ 2.12
MBD3-209ENST00000592012 PLEKHD1A6NEE1 506 aa28.3■■■□□ 2.12
MBD3-209ENST00000592012 TRIM52Q96A61 297 aa28.3■■■□□ 2.12
MBD3-209ENST00000592012 PTPRGP23470 1445 aa28.28■■■□□ 2.12
MBD3-209ENST00000592012 CAMSAP2Q08AD1 1489 aa28.27■■■□□ 2.12
MBD3-209ENST00000592012 YTHDC1Q96MU7 727 aaKnown RBP28.25■■■□□ 2.11
MBD3-209ENST00000592012 MPHOSPH9Q99550 1183 aa28.25■■■□□ 2.11
MBD3-209ENST00000592012 ABCC10Q5T3U5 1492 aa28.2■■■□□ 2.1
MBD3-209ENST00000592012 SHROOM2Q13796 1616 aa28.19■■■□□ 2.1
MBD3-209ENST00000592012 ZNF777Q9ULD5 760 aaPredicted RBP28.19■■■□□ 2.1
MBD3-209ENST00000592012 KDM5BQ9UGL1 1544 aa28.17■■■□□ 2.1
MBD3-209ENST00000592012 CDC42BPAQ5VT25 1732 aa28.17■■■□□ 2.1
MBD3-209ENST00000592012 NCOA1Q15788 1441 aa28.16■■■□□ 2.1
MBD3-209ENST00000592012 ADGRL2O95490 1459 aa28.12■■■□□ 2.09
MBD3-209ENST00000592012 CROCC2H7BZ55 1655 aa28.11■■■□□ 2.09
MBD3-209ENST00000592012 ADGBQ8N7X0 1667 aa28.11■■■□□ 2.09
MBD3-209ENST00000592012 FOXD1Q16676 465 aa28.08■■■□□ 2.09
MBD3-209ENST00000592012 HIRIP3Q9BW71 556 aaPredicted RBP28.08■■■□□ 2.09
MBD3-209ENST00000592012 ANKRD30BQ9BXX2 1392 aa28.07■■■□□ 2.08
MBD3-209ENST00000592012 DDX10Q13206 875 aaKnown RBP28.06■■■□□ 2.08
MBD3-209ENST00000592012 GTF3C3Q9Y5Q9 886 aa28.05■■■□□ 2.08
MBD3-209ENST00000592012 ERCC6L2Q5T890 1561 aa28.04■■■□□ 2.08
MBD3-209ENST00000592012 ANKRD30AQ9BXX3 1397 aa28.04■■■□□ 2.08
MBD3-209ENST00000592012 SLC4A1APQ9BWU0 796 aaKnown RBP28.03■■■□□ 2.08
MBD3-209ENST00000592012 SHANK2Q9UPX8 1470 aa28■■■□□ 2.07
MBD3-209ENST00000592012 PZPP20742 1482 aa27.99■■■□□ 2.07
MBD3-209ENST00000592012 L3MBTL2Q969R5 705 aa27.97■■■□□ 2.07
MBD3-209ENST00000592012 RPRD2Q5VT52 1461 aaKnown RBP27.97■■■□□ 2.07
MBD3-209ENST00000592012 C9orf84Q5VXU9 1444 aa27.97■■■□□ 2.07
MBD3-209ENST00000592012 CLASP1Q7Z460 1538 aa27.96■■■□□ 2.07
MBD3-209ENST00000592012 ABCC2Q92887 1545 aa27.96■■■□□ 2.07
MBD3-209ENST00000592012 ANKRD50Q9ULJ7 1429 aa27.96■■■□□ 2.07
MBD3-209ENST00000592012 CDC42BPBQ9Y5S2 1711 aa27.94■■■□□ 2.06
MBD3-209ENST00000592012 TSPY4P0CV99 314 aa27.94■■■□□ 2.06
MBD3-209ENST00000592012 TSPY10P0CW01 314 aa27.94■■■□□ 2.06
MBD3-209ENST00000592012 MBD5Q9P267 1494 aa27.94■■■□□ 2.06
MBD3-209ENST00000592012 HNRNPMP52272 730 aaKnown RBP eCLIP27.93■■■□□ 2.06
MBD3-209ENST00000592012 ARHGEF5Q12774 1597 aa27.93■■■□□ 2.06
MBD3-209ENST00000592012 PREX2Q70Z35 1606 aa27.92■■■□□ 2.06
MBD3-209ENST00000592012 SAMD9LQ8IVG5 1584 aa27.89■■■□□ 2.06
MBD3-209ENST00000592012 TEX14Q8IWB6 1497 aa27.87■■■□□ 2.05
MBD3-209ENST00000592012 KIAA1107Q9UPP5 1409 aa27.86■■■□□ 2.05
MBD3-209ENST00000592012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.86■■■□□ 2.054e-7■■■□□ 17
MBD3-209ENST00000592012 RSPH4AQ5TD94 716 aa27.86■■■□□ 2.05
MBD3-209ENST00000592012 TTC37Q6PGP7 1564 aa27.85■■■□□ 2.05
MBD3-209ENST00000592012 CCDC141Q6ZP82 1450 aa27.83■■■□□ 2.05
MBD3-209ENST00000592012 PKD2Q13563 968 aa27.82■■■□□ 2.04
MBD3-209ENST00000592012 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
MBD3-209ENST00000592012 KIF15Q9NS87 1388 aa27.82■■■□□ 2.04
MBD3-209ENST00000592012 HSPA5P11021 654 aaKnown RBP27.82■■■□□ 2.04
MBD3-209ENST00000592012 UHRF1BP1LA0JNW5 1464 aa27.81■■■□□ 2.04
MBD3-209ENST00000592012 NUP155O75694 1391 aa27.8■■■□□ 2.04
MBD3-209ENST00000592012 EIF4G2P78344 907 aaKnown RBP eCLIP27.79■■■□□ 2.04
MBD3-209ENST00000592012 NBPF8Q3BBV2 869 aa27.79■■■□□ 2.04
MBD3-209ENST00000592012 ARHGAP5Q13017 1502 aa27.78■■■□□ 2.04
MBD3-209ENST00000592012 ZCCHC11Q5TAX3 1644 aaKnown RBP27.76■■■□□ 2.03
MBD3-209ENST00000592012 KDM5DQ9BY66 1539 aa27.76■■■□□ 2.03
MBD3-209ENST00000592012 SYCP2Q9BX26 1530 aa27.75■■■□□ 2.03
MBD3-209ENST00000592012 MYO5CQ9NQX4 1742 aa27.75■■■□□ 2.03
MBD3-209ENST00000592012 ANP32CO43423 234 aa27.73■■■□□ 2.03
MBD3-209ENST00000592012 WASHC2AQ641Q2 1341 aa27.71■■■□□ 2.03
MBD3-209ENST00000592012 MAST1Q9Y2H9 1570 aa27.7■■■□□ 2.02
MBD3-209ENST00000592012 CCER2I3L3R5 266 aa27.7■■■□□ 2.02
MBD3-209ENST00000592012 PLEKHH2Q8IVE3 1493 aa27.69■■■□□ 2.02
MBD3-209ENST00000592012 PLCH2O75038 1416 aa27.68■■■□□ 2.02
MBD3-209ENST00000592012 SPATA31E1Q6ZUB1 1445 aa27.63■■■□□ 2.01
MBD3-209ENST00000592012 ARHGEF12Q9NZN5 1544 aa27.63■■■□□ 2.01
MBD3-209ENST00000592012 EFCAB2Q5VUJ9 269 aa27.61■■■□□ 2.01
MBD3-209ENST00000592012 C11orf95C9JLR9 678 aaPredicted RBP27.6■■■□□ 2.01
MBD3-209ENST00000592012 FAM135AQ9P2D6 1515 aa27.59■■■□□ 2.01
MBD3-209ENST00000592012 PLXNC1O60486 1568 aa27.58■■■□□ 2.01
MBD3-209ENST00000592012 CCDC7Q96M83 1385 aa27.55■■■□□ 2
MBD3-209ENST00000592012 UNC13BO14795 1591 aa27.54■■■□□ 2
MBD3-209ENST00000592012 UHRF1BP1Q6BDS2 1440 aa27.52■■■□□ 2
MBD3-209ENST00000592012 ABCC1P33527 1531 aa27.52■■■□□ 2
MBD3-209ENST00000592012 DUOX2Q9NRD8 1548 aa27.5■■□□□ 1.99
MBD3-209ENST00000592012 ARAP3Q8WWN8 1544 aa27.5■■□□□ 1.99
MBD3-209ENST00000592012 CNTLNQ9NXG0 1405 aa27.49■■□□□ 1.99
MBD3-209ENST00000592012 ZNF326Q5BKZ1 582 aaKnown RBP27.49■■□□□ 1.99
MBD3-209ENST00000592012 TRAPPC8Q9Y2L5 1435 aa27.49■■□□□ 1.99
MBD3-209ENST00000592012 WDR7Q9Y4E6 1490 aa27.48■■□□□ 1.99
MBD3-209ENST00000592012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.46■■□□□ 1.992e-7■□□□□ 9.9
MBD3-209ENST00000592012 POLR1AO95602 1720 aaPredicted RBP27.46■■□□□ 1.99
MBD3-209ENST00000592012 KIF7Q2M1P5 1343 aa27.46■■□□□ 1.99
MBD3-209ENST00000592012 ERBINQ96RT1 1412 aa27.46■■□□□ 1.99
MBD3-209ENST00000592012 USP47Q96K76 1375 aa27.44■■□□□ 1.98
MBD3-209ENST00000592012 IQGAP3Q86VI3 1631 aa27.44■■□□□ 1.98
MBD3-209ENST00000592012 RALGAPBQ86X10 1494 aa27.43■■□□□ 1.98
MBD3-209ENST00000592012 PLA2R1Q13018 1463 aa27.42■■□□□ 1.98
MBD3-209ENST00000592012 MAGI2Q86UL8 1455 aa27.42■■□□□ 1.98
MBD3-209ENST00000592012 DCAF11Q8TEB1 546 aa27.41■■□□□ 1.98
MBD3-209ENST00000592012 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
MBD3-209ENST00000592012 OSCARQ8IYS5 282 aa27.4■■□□□ 1.98
MBD3-209ENST00000592012 KDM5CP41229 1560 aa27.4■■□□□ 1.98
MBD3-209ENST00000592012 AFAP1Q8N556 730 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms