RNA–Protein interactions for RNA: ENST00000590097.5

PKN1-212, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-212ENST00000590097 CSRNP3Q8WYN3 585 aa30.09■■■□□ 2.41
PKN1-212ENST00000590097 ARHGEF12Q9NZN5 1544 aa30.08■■■□□ 2.41
PKN1-212ENST00000590097 MAGI2Q86UL8 1455 aa30.07■■■□□ 2.4
PKN1-212ENST00000590097 STRCQ7RTU9 1775 aa30.05■■■□□ 2.4
PKN1-212ENST00000590097 SCAPERQ9BY12 1400 aa30.05■■■□□ 2.4
PKN1-212ENST00000590097 SOCS7O14512 581 aa30.04■■■□□ 2.4
PKN1-212ENST00000590097 CDK13Q14004 1512 aaKnown RBP30.02■■■□□ 2.4
PKN1-212ENST00000590097 PREX1Q8TCU6 1659 aa30.01■■■□□ 2.39
PKN1-212ENST00000590097 ATP10AO60312 1499 aa29.99■■■□□ 2.39
PKN1-212ENST00000590097 PLCH2O75038 1416 aa29.98■■■□□ 2.39
PKN1-212ENST00000590097 C9orf84Q5VXU9 1444 aa29.95■■■□□ 2.38
PKN1-212ENST00000590097 SPATA31D1Q6ZQQ2 1576 aa29.86■■■□□ 2.37
PKN1-212ENST00000590097 UHRF1BP1Q6BDS2 1440 aa29.84■■■□□ 2.37
PKN1-212ENST00000590097 AFAP1Q8N556 730 aa29.82■■■□□ 2.36
PKN1-212ENST00000590097 DMRT2Q9Y5R5 561 aa29.82■■■□□ 2.36
PKN1-212ENST00000590097 LTBP4Q8N2S1 1624 aa29.81■■■□□ 2.36
PKN1-212ENST00000590097 EFCAB2Q5VUJ9 269 aa29.8■■■□□ 2.36
PKN1-212ENST00000590097 KIF14Q15058 1648 aa29.79■■■□□ 2.36
PKN1-212ENST00000590097 PTPRTO14522 1441 aa29.79■■■□□ 2.36
PKN1-212ENST00000590097 KDM5CP41229 1560 aa29.78■■■□□ 2.36
PKN1-212ENST00000590097 MYO5CQ9NQX4 1742 aa29.78■■■□□ 2.36
PKN1-212ENST00000590097 DIP2CQ9Y2E4 1556 aa29.77■■■□□ 2.36
PKN1-212ENST00000590097 C3P01024 1663 aa29.76■■■□□ 2.35
PKN1-212ENST00000590097 SETD1BQ9UPS6 1966 aaKnown RBP29.75■■■□□ 2.35
PKN1-212ENST00000590097 ZNF518AQ6AHZ1 1483 aa29.74■■■□□ 2.35
PKN1-212ENST00000590097 ABCA6Q8N139 1617 aa29.71■■■□□ 2.35
PKN1-212ENST00000590097 EEA1Q15075 1411 aa29.69■■■□□ 2.34
PKN1-212ENST00000590097 ATP1B4Q9UN42 357 aaPredicted RBP29.68■■■□□ 2.34
PKN1-212ENST00000590097 REREQ9P2R6 1566 aa29.68■■■□□ 2.34
PKN1-212ENST00000590097 ARHGAP5Q13017 1502 aa29.66■■■□□ 2.34
PKN1-212ENST00000590097 NCOA1Q15788 1441 aa29.64■■■□□ 2.34
PKN1-212ENST00000590097 TRAPPC8Q9Y2L5 1435 aa29.63■■■□□ 2.33
PKN1-212ENST00000590097 TROQ12816 1431 aaPredicted RBP29.62■■■□□ 2.33
PKN1-212ENST00000590097 MLH3Q9UHC1 1453 aa29.61■■■□□ 2.33
PKN1-212ENST00000590097 MYT1LQ9UL68 1186 aa29.61■■■□□ 2.33
PKN1-212ENST00000590097 AGLP35573 1532 aa29.61■■■□□ 2.33
PKN1-212ENST00000590097 CDC42BPBQ9Y5S2 1711 aa29.6■■■□□ 2.33
PKN1-212ENST00000590097 ARHGAP35Q9NRY4 1499 aa29.6■■■□□ 2.33
PKN1-212ENST00000590097 LRRIQ1Q96JM4 1722 aa29.59■■■□□ 2.33
PKN1-212ENST00000590097 IQSEC2Q5JU85 1478 aa29.59■■■□□ 2.33
PKN1-212ENST00000590097 EHMT2Q96KQ7 1210 aa29.58■■■□□ 2.33
PKN1-212ENST00000590097 FMN1Q68DA7 1419 aa29.55■■■□□ 2.32
PKN1-212ENST00000590097 CAMSAP1Q5T5Y3 1602 aa29.53■■■□□ 2.32
PKN1-212ENST00000590097 CDK11AQ9UQ88 783 aaPredicted RBP29.53■■■□□ 2.32
PKN1-212ENST00000590097 ABCC1P33527 1531 aa29.53■■■□□ 2.32
PKN1-212ENST00000590097 KIDINS220Q9ULH0 1771 aa29.52■■■□□ 2.32
PKN1-212ENST00000590097 ZNF335Q9H4Z2 1342 aaPredicted RBP29.52■■■□□ 2.32
PKN1-212ENST00000590097 NCKAP5LQ9HCH0 1330 aa29.51■■■□□ 2.32
PKN1-212ENST00000590097 ITSN2Q9NZM3 1697 aa29.49■■■□□ 2.31
PKN1-212ENST00000590097 PREX2Q70Z35 1606 aa29.47■■■□□ 2.31
PKN1-212ENST00000590097 ESF1Q9H501 851 aaKnown RBP29.47■■■□□ 2.31
PKN1-212ENST00000590097 CLIP1P30622 1438 aa29.45■■■□□ 2.31
PKN1-212ENST00000590097 CNTLNQ9NXG0 1405 aa29.45■■■□□ 2.3
PKN1-212ENST00000590097 UBAP1LF5GYI3 381 aa29.43■■■□□ 2.3
PKN1-212ENST00000590097 UBTFP17480 764 aaKnown RBP29.42■■■□□ 2.3
PKN1-212ENST00000590097 NPATQ14207 1427 aa29.42■■■□□ 2.3
PKN1-212ENST00000590097 ZMYM3Q14202 1370 aa29.41■■■□□ 2.3
PKN1-212ENST00000590097 MROH2AA6NES4 1674 aa29.38■■■□□ 2.29
PKN1-212ENST00000590097 SAMD9LQ8IVG5 1584 aa29.38■■■□□ 2.29
PKN1-212ENST00000590097 CDC42BPAQ5VT25 1732 aa29.35■■■□□ 2.29
PKN1-212ENST00000590097 TCOF1Q13428 1488 aaKnown RBP29.33■■■□□ 2.29
PKN1-212ENST00000590097 MYO3AQ8NEV4 1616 aa29.32■■■□□ 2.28
PKN1-212ENST00000590097 SUPT6HQ7KZ85 1726 aaKnown RBP29.31■■■□□ 2.28
PKN1-212ENST00000590097 ZNF142P52746 1687 aaPredicted RBP29.31■■■□□ 2.28
PKN1-212ENST00000590097 CLTCQ00610 1675 aaKnown RBP29.31■■■□□ 2.28
PKN1-212ENST00000590097 PLA2R1Q13018 1463 aa29.3■■■□□ 2.28
PKN1-212ENST00000590097 PTPRKQ15262 1439 aa29.3■■■□□ 2.28
PKN1-212ENST00000590097 CEP170BQ9Y4F5 1589 aaPredicted RBP29.28■■■□□ 2.28
PKN1-212ENST00000590097 SYCP2Q9BX26 1530 aa29.28■■■□□ 2.28
PKN1-212ENST00000590097 HNRNPMP52272 730 aaKnown RBP eCLIP29.26■■■□□ 2.27
PKN1-212ENST00000590097 PKD2Q13563 968 aa29.26■■■□□ 2.27
PKN1-212ENST00000590097 ZNF777Q9ULD5 760 aaPredicted RBP29.26■■■□□ 2.27
PKN1-212ENST00000590097 HSPA1LP34931 641 aa29.25■■■□□ 2.27
PKN1-212ENST00000590097 PLXNC1O60486 1568 aa29.25■■■□□ 2.27
PKN1-212ENST00000590097 MED1Q15648 1581 aaPredicted RBP29.23■■■□□ 2.27
PKN1-212ENST00000590097 CASKIN1Q8WXD9 1431 aa29.23■■■□□ 2.27
PKN1-212ENST00000590097 SPAG9O60271 1321 aaKnown RBP29.22■■■□□ 2.27
PKN1-212ENST00000590097 GPATCH8Q9UKJ3 1502 aaKnown RBP29.2■■■□□ 2.27
PKN1-212ENST00000590097 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.26
PKN1-212ENST00000590097 ATP7AQ04656 1500 aa29.2■■■□□ 2.26
PKN1-212ENST00000590097 PPP6R1Q9UPN7 881 aa29.19■■■□□ 2.26
PKN1-212ENST00000590097 INO80Q9ULG1 1556 aaPredicted RBP29.18■■■□□ 2.26
PKN1-212ENST00000590097 A2MP01023 1474 aa29.18■■■□□ 2.26
PKN1-212ENST00000590097 GGT6Q6P531 493 aa29.17■■■□□ 2.26
PKN1-212ENST00000590097 PIP4K2BP78356 416 aa29.16■■■□□ 2.26
PKN1-212ENST00000590097 DNMT1P26358 1616 aaKnown RBP29.13■■■□□ 2.25
PKN1-212ENST00000590097 SCAF1Q9H7N4 1312 aaKnown RBP29.13■■■□□ 2.25
PKN1-212ENST00000590097 NEURL4Q96JN8 1562 aa29.12■■■□□ 2.25
PKN1-212ENST00000590097 A2ML1A8K2U0 1454 aa29.1■■■□□ 2.25
PKN1-212ENST00000590097 ALKQ9UM73 1620 aa29.09■■■□□ 2.25
PKN1-212ENST00000590097 KIAA1107Q9UPP5 1409 aa29.09■■■□□ 2.25
PKN1-212ENST00000590097 FBXO31Q5XUX0 539 aaPredicted RBP29.05■■■□□ 2.24
PKN1-212ENST00000590097 SHANK2Q9UPX8 1470 aa29.04■■■□□ 2.24
PKN1-212ENST00000590097 FYCO1Q9BQS8 1478 aa29.03■■■□□ 2.24
PKN1-212ENST00000590097 ZNF644Q9H582 1327 aaPredicted RBP29.02■■■□□ 2.24
PKN1-212ENST00000590097 CFDP1Q9UEE9 299 aaPredicted RBP29.02■■■□□ 2.24
PKN1-212ENST00000590097 CPS1P31327 1500 aa29.02■■■□□ 2.24
PKN1-212ENST00000590097 POLR1AO95602 1720 aaPredicted RBP29■■■□□ 2.23
PKN1-212ENST00000590097 TOM1O60784 492 aa29■■■□□ 2.23
PKN1-212ENST00000590097 VWDEQ8N2E2 1590 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms