RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
SF3A2-205ENST00000590034 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
SF3A2-205ENST00000590034 MAGI2Q86UL8 1455 aa23.15■■□□□ 1.3
SF3A2-205ENST00000590034 SCAPERQ9BY12 1400 aa23.14■■□□□ 1.29
SF3A2-205ENST00000590034 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
SF3A2-205ENST00000590034 ATP1B4Q9UN42 357 aaPredicted RBP23.1■■□□□ 1.29
SF3A2-205ENST00000590034 FER1L4A9Z1Z3 1794 aa23.09■■□□□ 1.29
SF3A2-205ENST00000590034 TROQ12816 1431 aaPredicted RBP23.06■■□□□ 1.28
SF3A2-205ENST00000590034 MLECQ14165 292 aa23.04■■□□□ 1.28
SF3A2-205ENST00000590034 PLPPR3Q6T4P5 718 aa23.04■■□□□ 1.28
SF3A2-205ENST00000590034 FBXO41Q8TF61 875 aa23.04■■□□□ 1.28
SF3A2-205ENST00000590034 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
SF3A2-205ENST00000590034 HSPA2P54652 639 aa23.03■■□□□ 1.28
SF3A2-205ENST00000590034 EFCAB2Q5VUJ9 269 aa23.03■■□□□ 1.28
SF3A2-205ENST00000590034 ATP10AO60312 1499 aa23.03■■□□□ 1.28
SF3A2-205ENST00000590034 C9orf84Q5VXU9 1444 aa23.02■■□□□ 1.28
SF3A2-205ENST00000590034 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
SF3A2-205ENST00000590034 ARHGAP5Q13017 1502 aa23.02■■□□□ 1.28
SF3A2-205ENST00000590034 KDM5CP41229 1560 aa23.01■■□□□ 1.27
SF3A2-205ENST00000590034 CDC42BPBQ9Y5S2 1711 aa23.01■■□□□ 1.27
SF3A2-205ENST00000590034 ZNF518AQ6AHZ1 1483 aa23■■□□□ 1.27
SF3A2-205ENST00000590034 CLIP1P30622 1438 aa22.98■■□□□ 1.27
SF3A2-205ENST00000590034 DIP2CQ9Y2E4 1556 aa22.96■■□□□ 1.27
SF3A2-205ENST00000590034 PREX2Q70Z35 1606 aa22.95■■□□□ 1.26
SF3A2-205ENST00000590034 AFAP1Q8N556 730 aa22.95■■□□□ 1.26
SF3A2-205ENST00000590034 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
SF3A2-205ENST00000590034 ABCA6Q8N139 1617 aa22.93■■□□□ 1.26
SF3A2-205ENST00000590034 PREX1Q8TCU6 1659 aa22.92■■□□□ 1.26
SF3A2-205ENST00000590034 ABCC1P33527 1531 aa22.92■■□□□ 1.26
SF3A2-205ENST00000590034 ITSN2Q9NZM3 1697 aa22.9■■□□□ 1.26
SF3A2-205ENST00000590034 REREQ9P2R6 1566 aa22.9■■□□□ 1.26
SF3A2-205ENST00000590034 CDC42BPAQ5VT25 1732 aa22.9■■□□□ 1.26
SF3A2-205ENST00000590034 CCDC18Q5T9S5 1454 aa22.9■■□□□ 1.26
SF3A2-205ENST00000590034 MLH3Q9UHC1 1453 aa22.88■■□□□ 1.25
SF3A2-205ENST00000590034 CEBPAP49715 358 aaPredicted RBP22.88■■□□□ 1.25
SF3A2-205ENST00000590034 TRAPPC8Q9Y2L5 1435 aa22.88■■□□□ 1.25
SF3A2-205ENST00000590034 FYCO1Q9BQS8 1478 aa22.84■■□□□ 1.25
SF3A2-205ENST00000590034 KIDINS220Q9ULH0 1771 aa22.84■■□□□ 1.25
SF3A2-205ENST00000590034 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
SF3A2-205ENST00000590034 AGLP35573 1532 aa22.82■■□□□ 1.24
SF3A2-205ENST00000590034 STRCQ7RTU9 1775 aa22.81■■□□□ 1.24
SF3A2-205ENST00000590034 C3P01024 1663 aa22.81■■□□□ 1.24
SF3A2-205ENST00000590034 SETD1BQ9UPS6 1966 aaKnown RBP22.8■■□□□ 1.24
SF3A2-205ENST00000590034 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
SF3A2-205ENST00000590034 UHRF1BP1Q6BDS2 1440 aa22.75■■□□□ 1.23
SF3A2-205ENST00000590034 CERKQ8TCT0 537 aa22.75■■□□□ 1.23
SF3A2-205ENST00000590034 SYCP2Q9BX26 1530 aa22.75■■□□□ 1.23
SF3A2-205ENST00000590034 GPATCH8Q9UKJ3 1502 aaKnown RBP22.74■■□□□ 1.23
SF3A2-205ENST00000590034 ZNF777Q9ULD5 760 aaPredicted RBP22.69■■□□□ 1.22
SF3A2-205ENST00000590034 INO80Q9ULG1 1556 aaPredicted RBP22.67■■□□□ 1.22
SF3A2-205ENST00000590034 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
SF3A2-205ENST00000590034 ATP7AQ04656 1500 aa22.66■■□□□ 1.22
SF3A2-205ENST00000590034 CNTLNQ9NXG0 1405 aa22.65■■□□□ 1.22
SF3A2-205ENST00000590034 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
SF3A2-205ENST00000590034 PLXNC1O60486 1568 aa22.64■■□□□ 1.22
SF3A2-205ENST00000590034 HNRNPMP52272 730 aaKnown RBP eCLIP22.64■■□□□ 1.21
SF3A2-205ENST00000590034 SPAG9O60271 1321 aaKnown RBP22.63■■□□□ 1.21
SF3A2-205ENST00000590034 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
SF3A2-205ENST00000590034 KIAA1107Q9UPP5 1409 aa22.63■■□□□ 1.21
SF3A2-205ENST00000590034 DMRT2Q9Y5R5 561 aa22.62■■□□□ 1.21
SF3A2-205ENST00000590034 PTPRTO14522 1441 aa22.6■■□□□ 1.21
SF3A2-205ENST00000590034 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
SF3A2-205ENST00000590034 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
SF3A2-205ENST00000590034 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
SF3A2-205ENST00000590034 CLTCQ00610 1675 aaKnown RBP22.59■■□□□ 1.21
SF3A2-205ENST00000590034 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
SF3A2-205ENST00000590034 NCOA1Q15788 1441 aa22.58■■□□□ 1.21
SF3A2-205ENST00000590034 MTUS2Q5JR59 1369 aa22.58■■□□□ 1.21
SF3A2-205ENST00000590034 NPATQ14207 1427 aa22.57■■□□□ 1.2
SF3A2-205ENST00000590034 A2MP01023 1474 aa22.57■■□□□ 1.2
SF3A2-205ENST00000590034 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
SF3A2-205ENST00000590034 LTBP4Q8N2S1 1624 aa22.55■■□□□ 1.2
SF3A2-205ENST00000590034 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
SF3A2-205ENST00000590034 CAMSAP1Q5T5Y3 1602 aa22.54■■□□□ 1.2
SF3A2-205ENST00000590034 ADGBQ8N7X0 1667 aa22.54■■□□□ 1.2
SF3A2-205ENST00000590034 ZNF644Q9H582 1327 aaPredicted RBP22.54■■□□□ 1.2
SF3A2-205ENST00000590034 MBD5Q9P267 1494 aa22.53■■□□□ 1.2
SF3A2-205ENST00000590034 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
SF3A2-205ENST00000590034 ZNF142P52746 1687 aaPredicted RBP22.52■■□□□ 1.2
SF3A2-205ENST00000590034 PTPRKQ15262 1439 aa22.49■■□□□ 1.19
SF3A2-205ENST00000590034 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
SF3A2-205ENST00000590034 CEP170BQ9Y4F5 1589 aaPredicted RBP22.46■■□□□ 1.19
SF3A2-205ENST00000590034 GGT6Q6P531 493 aa22.46■■□□□ 1.19
SF3A2-205ENST00000590034 RTEL1-TNFRSF6BF6WH68 1400 aa22.43■■□□□ 1.18
SF3A2-205ENST00000590034 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
SF3A2-205ENST00000590034 NCKAP5LQ9HCH0 1330 aa22.42■■□□□ 1.18
SF3A2-205ENST00000590034 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
SF3A2-205ENST00000590034 TCOF1Q13428 1488 aaKnown RBP22.41■■□□□ 1.18
SF3A2-205ENST00000590034 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
SF3A2-205ENST00000590034 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
SF3A2-205ENST00000590034 CCDC141Q6ZP82 1450 aa22.39■■□□□ 1.17
SF3A2-205ENST00000590034 DHX29Q7Z478 1369 aaKnown RBP22.38■■□□□ 1.17
SF3A2-205ENST00000590034 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
SF3A2-205ENST00000590034 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
SF3A2-205ENST00000590034 DNMT1P26358 1616 aaKnown RBP22.36■■□□□ 1.17
SF3A2-205ENST00000590034 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
SF3A2-205ENST00000590034 DISP3Q9P2K9 1392 aa22.34■■□□□ 1.17
SF3A2-205ENST00000590034 PKD2Q13563 968 aa22.33■■□□□ 1.17
SF3A2-205ENST00000590034 KDM5DQ9BY66 1539 aa22.32■■□□□ 1.16
SF3A2-205ENST00000590034 ARHGEF5Q12774 1597 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms