RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
NEDD4L-227ENST00000590020 HECW1Q76N89 1606 aa21.8■■□□□ 1.08
NEDD4L-227ENST00000590020 CEBPAP49715 358 aaPredicted RBP21.8■■□□□ 1.08
NEDD4L-227ENST00000590020 PREX1Q8TCU6 1659 aa21.76■■□□□ 1.07
NEDD4L-227ENST00000590020 STRCQ7RTU9 1775 aa21.74■■□□□ 1.07
NEDD4L-227ENST00000590020 MAGI2Q86UL8 1455 aa21.74■■□□□ 1.07
NEDD4L-227ENST00000590020 ARHGEF12Q9NZN5 1544 aa21.73■■□□□ 1.07
NEDD4L-227ENST00000590020 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
NEDD4L-227ENST00000590020 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
NEDD4L-227ENST00000590020 CSRNP3Q8WYN3 585 aa21.7■■□□□ 1.06
NEDD4L-227ENST00000590020 ATP10AO60312 1499 aa21.69■■□□□ 1.06
NEDD4L-227ENST00000590020 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
NEDD4L-227ENST00000590020 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
NEDD4L-227ENST00000590020 DMRT2Q9Y5R5 561 aa21.66■■□□□ 1.06
NEDD4L-227ENST00000590020 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
NEDD4L-227ENST00000590020 PLCH2O75038 1416 aa21.63■■□□□ 1.05
NEDD4L-227ENST00000590020 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
NEDD4L-227ENST00000590020 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
NEDD4L-227ENST00000590020 MYO5CQ9NQX4 1742 aa21.56■■□□□ 1.04
NEDD4L-227ENST00000590020 AFAP1Q8N556 730 aa21.56■■□□□ 1.04
NEDD4L-227ENST00000590020 ATP1B4Q9UN42 357 aaPredicted RBP21.56■■□□□ 1.04
NEDD4L-227ENST00000590020 EFCAB2Q5VUJ9 269 aa21.55■■□□□ 1.04
NEDD4L-227ENST00000590020 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
NEDD4L-227ENST00000590020 PTPRTO14522 1441 aa21.55■■□□□ 1.04
NEDD4L-227ENST00000590020 C3P01024 1663 aa21.54■■□□□ 1.04
NEDD4L-227ENST00000590020 KIF14Q15058 1648 aa21.52■■□□□ 1.04
NEDD4L-227ENST00000590020 SETD1BQ9UPS6 1966 aaKnown RBP21.52■■□□□ 1.04
NEDD4L-227ENST00000590020 ZNF518AQ6AHZ1 1483 aa21.52■■□□□ 1.03
NEDD4L-227ENST00000590020 DIP2CQ9Y2E4 1556 aa21.51■■□□□ 1.03
NEDD4L-227ENST00000590020 KDM5CP41229 1560 aa21.49■■□□□ 1.03
NEDD4L-227ENST00000590020 ARHGAP5Q13017 1502 aa21.48■■□□□ 1.03
NEDD4L-227ENST00000590020 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
NEDD4L-227ENST00000590020 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
NEDD4L-227ENST00000590020 ESF1Q9H501 851 aaKnown RBP21.45■■□□□ 1.02
NEDD4L-227ENST00000590020 NCOA1Q15788 1441 aa21.44■■□□□ 1.02
NEDD4L-227ENST00000590020 TRAPPC8Q9Y2L5 1435 aa21.43■■□□□ 1.02
NEDD4L-227ENST00000590020 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
NEDD4L-227ENST00000590020 REREQ9P2R6 1566 aa21.41■■□□□ 1.02
NEDD4L-227ENST00000590020 CAMSAP1Q5T5Y3 1602 aa21.4■■□□□ 1.02
NEDD4L-227ENST00000590020 EEA1Q15075 1411 aa21.39■■□□□ 1.02
NEDD4L-227ENST00000590020 ZNF335Q9H4Z2 1342 aaPredicted RBP21.39■■□□□ 1.01
NEDD4L-227ENST00000590020 NCKAP5LQ9HCH0 1330 aa21.39■■□□□ 1.01
NEDD4L-227ENST00000590020 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
NEDD4L-227ENST00000590020 CDK11AQ9UQ88 783 aaPredicted RBP21.39■■□□□ 1.01
NEDD4L-227ENST00000590020 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
NEDD4L-227ENST00000590020 MLH3Q9UHC1 1453 aa21.38■■□□□ 1.01
NEDD4L-227ENST00000590020 TROQ12816 1431 aaPredicted RBP21.38■■□□□ 1.01
NEDD4L-227ENST00000590020 AGLP35573 1532 aa21.36■■□□□ 1.01
NEDD4L-227ENST00000590020 FMN1Q68DA7 1419 aa21.35■■□□□ 1.01
NEDD4L-227ENST00000590020 LRRIQ1Q96JM4 1722 aa21.35■■□□□ 1.01
NEDD4L-227ENST00000590020 CLIP1P30622 1438 aa21.32■■□□□ 1
NEDD4L-227ENST00000590020 ITSN2Q9NZM3 1697 aa21.32■■□□□ 1
NEDD4L-227ENST00000590020 ABCC1P33527 1531 aa21.32■■□□□ 1
NEDD4L-227ENST00000590020 KIDINS220Q9ULH0 1771 aa21.32■■□□□ 1
NEDD4L-227ENST00000590020 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
NEDD4L-227ENST00000590020 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
NEDD4L-227ENST00000590020 UBTFP17480 764 aaKnown RBP21.29■■□□□ 1
NEDD4L-227ENST00000590020 PREX2Q70Z35 1606 aa21.29■■□□□ 1
NEDD4L-227ENST00000590020 ZMYM3Q14202 1370 aa21.27■■□□□ 1
NEDD4L-227ENST00000590020 NPATQ14207 1427 aa21.26■□□□□ 0.99
NEDD4L-227ENST00000590020 MROH2AA6NES4 1674 aa21.25■□□□□ 0.99
NEDD4L-227ENST00000590020 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
NEDD4L-227ENST00000590020 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
NEDD4L-227ENST00000590020 CLTCQ00610 1675 aaKnown RBP21.24■□□□□ 0.99
NEDD4L-227ENST00000590020 MYO3AQ8NEV4 1616 aa21.23■□□□□ 0.99
NEDD4L-227ENST00000590020 HSPA1LP34931 641 aa21.22■□□□□ 0.99
NEDD4L-227ENST00000590020 ZNF777Q9ULD5 760 aaPredicted RBP21.22■□□□□ 0.99
NEDD4L-227ENST00000590020 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
NEDD4L-227ENST00000590020 SAMD9LQ8IVG5 1584 aa21.22■□□□□ 0.99
NEDD4L-227ENST00000590020 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
NEDD4L-227ENST00000590020 CDC42BPAQ5VT25 1732 aa21.21■□□□□ 0.99
NEDD4L-227ENST00000590020 PKD2Q13563 968 aa21.2■□□□□ 0.98
NEDD4L-227ENST00000590020 ZNF142P52746 1687 aaPredicted RBP21.2■□□□□ 0.98
NEDD4L-227ENST00000590020 CEP170BQ9Y4F5 1589 aaPredicted RBP21.19■□□□□ 0.98
NEDD4L-227ENST00000590020 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
NEDD4L-227ENST00000590020 PLA2R1Q13018 1463 aa21.18■□□□□ 0.98
NEDD4L-227ENST00000590020 PPP6R1Q9UPN7 881 aa21.17■□□□□ 0.98
NEDD4L-227ENST00000590020 SYCP2Q9BX26 1530 aa21.16■□□□□ 0.98
NEDD4L-227ENST00000590020 PTPRKQ15262 1439 aa21.16■□□□□ 0.98
NEDD4L-227ENST00000590020 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.98
NEDD4L-227ENST00000590020 SPAG9O60271 1321 aaKnown RBP21.15■□□□□ 0.98
NEDD4L-227ENST00000590020 GGT6Q6P531 493 aa21.14■□□□□ 0.97
NEDD4L-227ENST00000590020 ATP7AQ04656 1500 aa21.11■□□□□ 0.97
NEDD4L-227ENST00000590020 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
NEDD4L-227ENST00000590020 CCDC18Q5T9S5 1454 aa21.09■□□□□ 0.97
NEDD4L-227ENST00000590020 A2MP01023 1474 aa21.08■□□□□ 0.97
NEDD4L-227ENST00000590020 DNMT1P26358 1616 aaKnown RBP21.07■□□□□ 0.96
NEDD4L-227ENST00000590020 CASKIN1Q8WXD9 1431 aa21.07■□□□□ 0.96
NEDD4L-227ENST00000590020 TOM1O60784 492 aa21.07■□□□□ 0.96
NEDD4L-227ENST00000590020 INO80Q9ULG1 1556 aaPredicted RBP21.06■□□□□ 0.96
NEDD4L-227ENST00000590020 GPATCH8Q9UKJ3 1502 aaKnown RBP21.06■□□□□ 0.96
NEDD4L-227ENST00000590020 A2ML1A8K2U0 1454 aa21.05■□□□□ 0.96
NEDD4L-227ENST00000590020 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
NEDD4L-227ENST00000590020 SHANK2Q9UPX8 1470 aa21.03■□□□□ 0.96
NEDD4L-227ENST00000590020 POLR1AO95602 1720 aaPredicted RBP21.03■□□□□ 0.96
NEDD4L-227ENST00000590020 CPS1P31327 1500 aa21.02■□□□□ 0.96
NEDD4L-227ENST00000590020 FBXO31Q5XUX0 539 aaPredicted RBP21■□□□□ 0.95
NEDD4L-227ENST00000590020 CFDP1Q9UEE9 299 aaPredicted RBP20.99■□□□□ 0.95
NEDD4L-227ENST00000590020 ALKQ9UM73 1620 aa20.99■□□□□ 0.95
NEDD4L-227ENST00000590020 KIAA1107Q9UPP5 1409 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms