RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SCAPERQ9BY12 1400 aa21.7■■□□□ 1.06
PRKCSH-210ENST00000589990 MAGI2Q86UL8 1455 aa21.7■■□□□ 1.06
PRKCSH-210ENST00000589990 CEBPAP49715 358 aaPredicted RBP21.69■■□□□ 1.06
PRKCSH-210ENST00000589990 ARHGEF12Q9NZN5 1544 aa21.68■■□□□ 1.06
PRKCSH-210ENST00000589990 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
PRKCSH-210ENST00000589990 STRCQ7RTU9 1775 aa21.66■■□□□ 1.06
PRKCSH-210ENST00000589990 PLCH2O75038 1416 aa21.64■■□□□ 1.06
PRKCSH-210ENST00000589990 ATP10AO60312 1499 aa21.64■■□□□ 1.05
PRKCSH-210ENST00000589990 DISP3Q9P2K9 1392 aa21.62■■□□□ 1.05
PRKCSH-210ENST00000589990 C9orf84Q5VXU9 1444 aa21.62■■□□□ 1.05
PRKCSH-210ENST00000589990 KIF14Q15058 1648 aa21.58■■□□□ 1.04
PRKCSH-210ENST00000589990 MYO5CQ9NQX4 1742 aa21.57■■□□□ 1.04
PRKCSH-210ENST00000589990 AFAP1Q8N556 730 aa21.53■■□□□ 1.04
PRKCSH-210ENST00000589990 SOCS7O14512 581 aa21.52■■□□□ 1.04
PRKCSH-210ENST00000589990 EFCAB2Q5VUJ9 269 aa21.52■■□□□ 1.04
PRKCSH-210ENST00000589990 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
PRKCSH-210ENST00000589990 EEA1Q15075 1411 aa21.52■■□□□ 1.04
PRKCSH-210ENST00000589990 UHRF1BP1Q6BDS2 1440 aa21.52■■□□□ 1.04
PRKCSH-210ENST00000589990 KDM5CP41229 1560 aa21.51■■□□□ 1.03
PRKCSH-210ENST00000589990 DIP2CQ9Y2E4 1556 aa21.51■■□□□ 1.03
PRKCSH-210ENST00000589990 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
PRKCSH-210ENST00000589990 ZNF518AQ6AHZ1 1483 aa21.49■■□□□ 1.03
PRKCSH-210ENST00000589990 C3P01024 1663 aa21.49■■□□□ 1.03
PRKCSH-210ENST00000589990 SPATA31D1Q6ZQQ2 1576 aa21.48■■□□□ 1.03
PRKCSH-210ENST00000589990 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
PRKCSH-210ENST00000589990 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
PRKCSH-210ENST00000589990 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
PRKCSH-210ENST00000589990 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
PRKCSH-210ENST00000589990 SETD1BQ9UPS6 1966 aaKnown RBP21.45■■□□□ 1.02
PRKCSH-210ENST00000589990 LTBP4Q8N2S1 1624 aa21.45■■□□□ 1.02
PRKCSH-210ENST00000589990 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
PRKCSH-210ENST00000589990 MYT1LQ9UL68 1186 aa21.43■■□□□ 1.02
PRKCSH-210ENST00000589990 PTPRTO14522 1441 aa21.43■■□□□ 1.02
PRKCSH-210ENST00000589990 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
PRKCSH-210ENST00000589990 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
PRKCSH-210ENST00000589990 REREQ9P2R6 1566 aa21.42■■□□□ 1.02
PRKCSH-210ENST00000589990 FMN1Q68DA7 1419 aa21.39■■□□□ 1.02
PRKCSH-210ENST00000589990 TRAPPC8Q9Y2L5 1435 aa21.39■■□□□ 1.02
PRKCSH-210ENST00000589990 MLH3Q9UHC1 1453 aa21.38■■□□□ 1.01
PRKCSH-210ENST00000589990 CDK11AQ9UQ88 783 aaPredicted RBP21.36■■□□□ 1.01
PRKCSH-210ENST00000589990 NCOA1Q15788 1441 aa21.36■■□□□ 1.01
PRKCSH-210ENST00000589990 ABCC1P33527 1531 aa21.35■■□□□ 1.01
PRKCSH-210ENST00000589990 AGLP35573 1532 aa21.35■■□□□ 1.01
PRKCSH-210ENST00000589990 ITSN2Q9NZM3 1697 aa21.34■■□□□ 1.01
PRKCSH-210ENST00000589990 KIDINS220Q9ULH0 1771 aa21.34■■□□□ 1.01
PRKCSH-210ENST00000589990 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
PRKCSH-210ENST00000589990 PREX2Q70Z35 1606 aa21.33■■□□□ 1.01
PRKCSH-210ENST00000589990 CLIP1P30622 1438 aa21.32■■□□□ 1
PRKCSH-210ENST00000589990 CAMSAP1Q5T5Y3 1602 aa21.31■■□□□ 1
PRKCSH-210ENST00000589990 ESF1Q9H501 851 aaKnown RBP21.3■■□□□ 1
PRKCSH-210ENST00000589990 IQSEC2Q5JU85 1478 aa21.28■■□□□ 1
PRKCSH-210ENST00000589990 ZNF335Q9H4Z2 1342 aaPredicted RBP21.27■□□□□ 0.99
PRKCSH-210ENST00000589990 NCKAP5LQ9HCH0 1330 aa21.27■□□□□ 0.99
PRKCSH-210ENST00000589990 CDC42BPAQ5VT25 1732 aa21.26■□□□□ 0.99
PRKCSH-210ENST00000589990 CNTLNQ9NXG0 1405 aa21.24■□□□□ 0.99
PRKCSH-210ENST00000589990 SAMD9LQ8IVG5 1584 aa21.23■□□□□ 0.99
PRKCSH-210ENST00000589990 MROH2AA6NES4 1674 aa21.23■□□□□ 0.99
PRKCSH-210ENST00000589990 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
PRKCSH-210ENST00000589990 ZMYM3Q14202 1370 aa21.22■□□□□ 0.99
PRKCSH-210ENST00000589990 NPATQ14207 1427 aa21.21■□□□□ 0.99
PRKCSH-210ENST00000589990 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
PRKCSH-210ENST00000589990 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
PRKCSH-210ENST00000589990 MYO3AQ8NEV4 1616 aa21.19■□□□□ 0.98
PRKCSH-210ENST00000589990 SYCP2Q9BX26 1530 aa21.19■□□□□ 0.98
PRKCSH-210ENST00000589990 ZNF777Q9ULD5 760 aaPredicted RBP21.18■□□□□ 0.98
PRKCSH-210ENST00000589990 CASKIN1Q8WXD9 1431 aa21.17■□□□□ 0.98
PRKCSH-210ENST00000589990 ZNF142P52746 1687 aaPredicted RBP21.16■□□□□ 0.98
PRKCSH-210ENST00000589990 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
PRKCSH-210ENST00000589990 HNRNPMP52272 730 aaKnown RBP eCLIP21.15■□□□□ 0.98
PRKCSH-210ENST00000589990 CEP170BQ9Y4F5 1589 aaPredicted RBP21.14■□□□□ 0.98
PRKCSH-210ENST00000589990 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-210ENST00000589990 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
PRKCSH-210ENST00000589990 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-210ENST00000589990 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
PRKCSH-210ENST00000589990 GPATCH8Q9UKJ3 1502 aaKnown RBP21.13■□□□□ 0.97
PRKCSH-210ENST00000589990 ATP7AQ04656 1500 aa21.12■□□□□ 0.97
PRKCSH-210ENST00000589990 PLA2R1Q13018 1463 aa21.12■□□□□ 0.97
PRKCSH-210ENST00000589990 INO80Q9ULG1 1556 aaPredicted RBP21.11■□□□□ 0.97
PRKCSH-210ENST00000589990 A2MP01023 1474 aa21.08■□□□□ 0.97
PRKCSH-210ENST00000589990 PKD2Q13563 968 aa21.08■□□□□ 0.97
PRKCSH-210ENST00000589990 GGT6Q6P531 493 aa21.07■□□□□ 0.96
PRKCSH-210ENST00000589990 HSPA1LP34931 641 aa21.05■□□□□ 0.96
PRKCSH-210ENST00000589990 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
PRKCSH-210ENST00000589990 FYCO1Q9BQS8 1478 aa21.04■□□□□ 0.96
PRKCSH-210ENST00000589990 MED1Q15648 1581 aaPredicted RBP21.04■□□□□ 0.96
PRKCSH-210ENST00000589990 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
PRKCSH-210ENST00000589990 KIAA1107Q9UPP5 1409 aa21.02■□□□□ 0.96
PRKCSH-210ENST00000589990 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.95
PRKCSH-210ENST00000589990 PIP4K2BP78356 416 aa21.01■□□□□ 0.95
PRKCSH-210ENST00000589990 NEURL4Q96JN8 1562 aa21.01■□□□□ 0.95
PRKCSH-210ENST00000589990 A2ML1A8K2U0 1454 aa21.01■□□□□ 0.95
PRKCSH-210ENST00000589990 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
PRKCSH-210ENST00000589990 CFDP1Q9UEE9 299 aaPredicted RBP21■□□□□ 0.95
PRKCSH-210ENST00000589990 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
PRKCSH-210ENST00000589990 ADGBQ8N7X0 1667 aa20.98■□□□□ 0.95
PRKCSH-210ENST00000589990 FBXO31Q5XUX0 539 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-210ENST00000589990 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-210ENST00000589990 PLEKHH2Q8IVE3 1493 aa20.96■□□□□ 0.95
PRKCSH-210ENST00000589990 CCNB3Q8WWL7 1395 aa20.96■□□□□ 0.95
PRKCSH-210ENST00000589990 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms