RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 FER1L4A9Z1Z3 1794 aa25.14■■□□□ 1.62
POLR2E-206ENST00000589737 KIF14Q15058 1648 aa25.14■■□□□ 1.61
POLR2E-206ENST00000589737 SCAPERQ9BY12 1400 aa25.09■■□□□ 1.61
POLR2E-206ENST00000589737 UBTFP17480 764 aaKnown RBP25.08■■□□□ 1.61
POLR2E-206ENST00000589737 TROQ12816 1431 aaPredicted RBP25.03■■□□□ 1.6
POLR2E-206ENST00000589737 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
POLR2E-206ENST00000589737 KDM5CP41229 1560 aa25.02■■□□□ 1.6
POLR2E-206ENST00000589737 CDC42BPBQ9Y5S2 1711 aa25.02■■□□□ 1.6
POLR2E-206ENST00000589737 ARHGEF12Q9NZN5 1544 aa25.02■■□□□ 1.6
POLR2E-206ENST00000589737 C9orf84Q5VXU9 1444 aa25.01■■□□□ 1.59
POLR2E-206ENST00000589737 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
POLR2E-206ENST00000589737 ARHGAP5Q13017 1502 aa25■■□□□ 1.59
POLR2E-206ENST00000589737 ATP10AO60312 1499 aa24.99■■□□□ 1.59
POLR2E-206ENST00000589737 ZNF518AQ6AHZ1 1483 aa24.99■■□□□ 1.59
POLR2E-206ENST00000589737 CLIP1P30622 1438 aa24.98■■□□□ 1.59
POLR2E-206ENST00000589737 ATP1B4Q9UN42 357 aaPredicted RBP24.98■■□□□ 1.59
POLR2E-206ENST00000589737 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
POLR2E-206ENST00000589737 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
POLR2E-206ENST00000589737 FBXO41Q8TF61 875 aa24.97■■□□□ 1.59
POLR2E-206ENST00000589737 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
POLR2E-206ENST00000589737 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
POLR2E-206ENST00000589737 DIP2CQ9Y2E4 1556 aa24.94■■□□□ 1.58
POLR2E-206ENST00000589737 ITSN2Q9NZM3 1697 aa24.93■■□□□ 1.58
POLR2E-206ENST00000589737 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
POLR2E-206ENST00000589737 ABCA6Q8N139 1617 aa24.92■■□□□ 1.58
POLR2E-206ENST00000589737 CCDC18Q5T9S5 1454 aa24.91■■□□□ 1.58
POLR2E-206ENST00000589737 MLECQ14165 292 aa24.91■■□□□ 1.58
POLR2E-206ENST00000589737 ABCC1P33527 1531 aa24.91■■□□□ 1.58
POLR2E-206ENST00000589737 CDC42BPAQ5VT25 1732 aa24.9■■□□□ 1.58
POLR2E-206ENST00000589737 CASKIN1Q8WXD9 1431 aa24.89■■□□□ 1.58
POLR2E-206ENST00000589737 HSPA2P54652 639 aa24.89■■□□□ 1.58
POLR2E-206ENST00000589737 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
POLR2E-206ENST00000589737 MLH3Q9UHC1 1453 aa24.84■■□□□ 1.57
POLR2E-206ENST00000589737 SETD1BQ9UPS6 1966 aaKnown RBP24.84■■□□□ 1.57
POLR2E-206ENST00000589737 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
POLR2E-206ENST00000589737 AFAP1Q8N556 730 aa24.82■■□□□ 1.56
POLR2E-206ENST00000589737 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
POLR2E-206ENST00000589737 C3P01024 1663 aa24.81■■□□□ 1.56
POLR2E-206ENST00000589737 AGLP35573 1532 aa24.8■■□□□ 1.56
POLR2E-206ENST00000589737 TRAPPC8Q9Y2L5 1435 aa24.79■■□□□ 1.56
POLR2E-206ENST00000589737 STRCQ7RTU9 1775 aa24.78■■□□□ 1.56
POLR2E-206ENST00000589737 SAMD9LQ8IVG5 1584 aa24.75■■□□□ 1.55
POLR2E-206ENST00000589737 CEBPAP49715 358 aaPredicted RBP24.73■■□□□ 1.55
POLR2E-206ENST00000589737 UHRF1BP1Q6BDS2 1440 aa24.71■■□□□ 1.55
POLR2E-206ENST00000589737 MYT1LQ9UL68 1186 aa24.71■■□□□ 1.55
POLR2E-206ENST00000589737 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
POLR2E-206ENST00000589737 MROH2AA6NES4 1674 aa24.68■■□□□ 1.54
POLR2E-206ENST00000589737 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
POLR2E-206ENST00000589737 CERKQ8TCT0 537 aa24.65■■□□□ 1.54
POLR2E-206ENST00000589737 INO80Q9ULG1 1556 aaPredicted RBP24.65■■□□□ 1.54
POLR2E-206ENST00000589737 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.53
POLR2E-206ENST00000589737 CNTLNQ9NXG0 1405 aa24.62■■□□□ 1.53
POLR2E-206ENST00000589737 ATP7AQ04656 1500 aa24.62■■□□□ 1.53
POLR2E-206ENST00000589737 PLXNC1O60486 1568 aa24.61■■□□□ 1.53
POLR2E-206ENST00000589737 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.53
POLR2E-206ENST00000589737 KIAA1107Q9UPP5 1409 aa24.57■■□□□ 1.52
POLR2E-206ENST00000589737 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
POLR2E-206ENST00000589737 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
POLR2E-206ENST00000589737 ZNF777Q9ULD5 760 aaPredicted RBP24.55■■□□□ 1.52
POLR2E-206ENST00000589737 DMRT2Q9Y5R5 561 aa24.55■■□□□ 1.52
POLR2E-206ENST00000589737 ADGBQ8N7X0 1667 aa24.55■■□□□ 1.52
POLR2E-206ENST00000589737 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
POLR2E-206ENST00000589737 PTPRTO14522 1441 aa24.54■■□□□ 1.52
POLR2E-206ENST00000589737 SPAG9O60271 1321 aaKnown RBP24.54■■□□□ 1.52
POLR2E-206ENST00000589737 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
POLR2E-206ENST00000589737 EHBP1L1Q8N3D4 1523 aa24.53■■□□□ 1.52
POLR2E-206ENST00000589737 NPATQ14207 1427 aa24.52■■□□□ 1.52
POLR2E-206ENST00000589737 CCNB3Q8WWL7 1395 aa24.52■■□□□ 1.52
POLR2E-206ENST00000589737 NCOA1Q15788 1441 aa24.52■■□□□ 1.52
POLR2E-206ENST00000589737 A2MP01023 1474 aa24.51■■□□□ 1.51
POLR2E-206ENST00000589737 MYO3AQ8NEV4 1616 aa24.5■■□□□ 1.51
POLR2E-206ENST00000589737 HNRNPMP52272 730 aaKnown RBP eCLIP24.5■■□□□ 1.51
POLR2E-206ENST00000589737 MTUS2Q5JR59 1369 aa24.5■■□□□ 1.51
POLR2E-206ENST00000589737 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
POLR2E-206ENST00000589737 CAMSAP1Q5T5Y3 1602 aa24.47■■□□□ 1.51
POLR2E-206ENST00000589737 LTBP4Q8N2S1 1624 aa24.47■■□□□ 1.51
POLR2E-206ENST00000589737 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
POLR2E-206ENST00000589737 MBD5Q9P267 1494 aa24.42■■□□□ 1.5
POLR2E-206ENST00000589737 CEP162Q5TB80 1403 aa24.42■■□□□ 1.5
POLR2E-206ENST00000589737 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
POLR2E-206ENST00000589737 IQSEC2Q5JU85 1478 aa24.39■■□□□ 1.5
POLR2E-206ENST00000589737 PTPRKQ15262 1439 aa24.39■■□□□ 1.5
POLR2E-206ENST00000589737 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
POLR2E-206ENST00000589737 RTEL1-TNFRSF6BF6WH68 1400 aa24.36■■□□□ 1.49
POLR2E-206ENST00000589737 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
POLR2E-206ENST00000589737 CAMSAP2Q08AD1 1489 aa24.32■■□□□ 1.48
POLR2E-206ENST00000589737 TCOF1Q13428 1488 aaKnown RBP24.32■■□□□ 1.48
POLR2E-206ENST00000589737 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
POLR2E-206ENST00000589737 CCDC141Q6ZP82 1450 aa24.32■■□□□ 1.48
POLR2E-206ENST00000589737 GGT6Q6P531 493 aa24.31■■□□□ 1.48
POLR2E-206ENST00000589737 FAM135AQ9P2D6 1515 aa24.3■■□□□ 1.48
POLR2E-206ENST00000589737 PPP6R1Q9UPN7 881 aa24.3■■□□□ 1.48
POLR2E-206ENST00000589737 POLR1AO95602 1720 aaPredicted RBP24.3■■□□□ 1.48
POLR2E-206ENST00000589737 DNMT1P26358 1616 aaKnown RBP24.28■■□□□ 1.48
POLR2E-206ENST00000589737 DHX29Q7Z478 1369 aaKnown RBP24.28■■□□□ 1.48
POLR2E-206ENST00000589737 KDM5DQ9BY66 1539 aa24.27■■□□□ 1.48
POLR2E-206ENST00000589737 ARHGEF5Q12774 1597 aa24.27■■□□□ 1.48
POLR2E-206ENST00000589737 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
POLR2E-206ENST00000589737 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
POLR2E-206ENST00000589737 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms