RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 SCAPERQ9BY12 1400 aa26.88■■□□□ 1.89
RAB3D-202ENST00000589655 MAGI2Q86UL8 1455 aa26.87■■□□□ 1.89
RAB3D-202ENST00000589655 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
RAB3D-202ENST00000589655 KIF14Q15058 1648 aa26.84■■□□□ 1.89
RAB3D-202ENST00000589655 MYO5CQ9NQX4 1742 aa26.82■■□□□ 1.88
RAB3D-202ENST00000589655 LRRIQ1Q96JM4 1722 aa26.81■■□□□ 1.88
RAB3D-202ENST00000589655 EFCAB2Q5VUJ9 269 aa26.78■■□□□ 1.88
RAB3D-202ENST00000589655 TROQ12816 1431 aaPredicted RBP26.78■■□□□ 1.88
RAB3D-202ENST00000589655 MLECQ14165 292 aa26.76■■□□□ 1.87
RAB3D-202ENST00000589655 FBXO41Q8TF61 875 aa26.76■■□□□ 1.87
RAB3D-202ENST00000589655 CDK11AQ9UQ88 783 aaPredicted RBP26.76■■□□□ 1.87
RAB3D-202ENST00000589655 PLPPR3Q6T4P5 718 aa26.75■■□□□ 1.87
RAB3D-202ENST00000589655 ATP10AO60312 1499 aa26.74■■□□□ 1.87
RAB3D-202ENST00000589655 HSPA2P54652 639 aa26.74■■□□□ 1.87
RAB3D-202ENST00000589655 FER1L4A9Z1Z3 1794 aa26.74■■□□□ 1.87
RAB3D-202ENST00000589655 ARHGEF12Q9NZN5 1544 aa26.72■■□□□ 1.87
RAB3D-202ENST00000589655 C9orf84Q5VXU9 1444 aa26.72■■□□□ 1.87
RAB3D-202ENST00000589655 ARHGAP5Q13017 1502 aa26.7■■□□□ 1.86
RAB3D-202ENST00000589655 KDM5CP41229 1560 aa26.69■■□□□ 1.86
RAB3D-202ENST00000589655 ZNF518AQ6AHZ1 1483 aa26.68■■□□□ 1.86
RAB3D-202ENST00000589655 AFAP1Q8N556 730 aa26.68■■□□□ 1.86
RAB3D-202ENST00000589655 CLIP1P30622 1438 aa26.67■■□□□ 1.86
RAB3D-202ENST00000589655 CDC42BPBQ9Y5S2 1711 aa26.67■■□□□ 1.86
RAB3D-202ENST00000589655 CASKIN1Q8WXD9 1431 aa26.63■■□□□ 1.85
RAB3D-202ENST00000589655 DIP2CQ9Y2E4 1556 aa26.62■■□□□ 1.85
RAB3D-202ENST00000589655 PREX2Q70Z35 1606 aa26.6■■□□□ 1.85
RAB3D-202ENST00000589655 CEBPAP49715 358 aaPredicted RBP26.59■■□□□ 1.85
RAB3D-202ENST00000589655 CCDC18Q5T9S5 1454 aa26.58■■□□□ 1.85
RAB3D-202ENST00000589655 ABCA6Q8N139 1617 aa26.57■■□□□ 1.84
RAB3D-202ENST00000589655 TRAPPC8Q9Y2L5 1435 aa26.57■■□□□ 1.84
RAB3D-202ENST00000589655 ABCC1P33527 1531 aa26.57■■□□□ 1.84
RAB3D-202ENST00000589655 MLH3Q9UHC1 1453 aa26.56■■□□□ 1.84
RAB3D-202ENST00000589655 REREQ9P2R6 1566 aa26.56■■□□□ 1.84
RAB3D-202ENST00000589655 PREX1Q8TCU6 1659 aa26.54■■□□□ 1.84
RAB3D-202ENST00000589655 ITSN2Q9NZM3 1697 aa26.53■■□□□ 1.84
RAB3D-202ENST00000589655 CDC42BPAQ5VT25 1732 aa26.52■■□□□ 1.84
RAB3D-202ENST00000589655 FYCO1Q9BQS8 1478 aa26.5■■□□□ 1.83
RAB3D-202ENST00000589655 MYT1LQ9UL68 1186 aa26.5■■□□□ 1.83
RAB3D-202ENST00000589655 AGLP35573 1532 aa26.48■■□□□ 1.83
RAB3D-202ENST00000589655 KIDINS220Q9ULH0 1771 aa26.48■■□□□ 1.83
RAB3D-202ENST00000589655 STRCQ7RTU9 1775 aa26.44■■□□□ 1.82
RAB3D-202ENST00000589655 CERKQ8TCT0 537 aa26.44■■□□□ 1.82
RAB3D-202ENST00000589655 C3P01024 1663 aa26.44■■□□□ 1.82
RAB3D-202ENST00000589655 SAMD9LQ8IVG5 1584 aa26.42■■□□□ 1.82
RAB3D-202ENST00000589655 SETD1BQ9UPS6 1966 aaKnown RBP26.42■■□□□ 1.82
RAB3D-202ENST00000589655 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
RAB3D-202ENST00000589655 GPATCH8Q9UKJ3 1502 aaKnown RBP26.41■■□□□ 1.82
RAB3D-202ENST00000589655 SYCP2Q9BX26 1530 aa26.38■■□□□ 1.81
RAB3D-202ENST00000589655 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
RAB3D-202ENST00000589655 HNRNPMP52272 730 aaKnown RBP eCLIP26.33■■□□□ 1.81
RAB3D-202ENST00000589655 CNTLNQ9NXG0 1405 aa26.3■■□□□ 1.8
RAB3D-202ENST00000589655 KIAA1107Q9UPP5 1409 aa26.3■■□□□ 1.8
RAB3D-202ENST00000589655 ESF1Q9H501 851 aaKnown RBP26.29■■□□□ 1.8
RAB3D-202ENST00000589655 DMRT2Q9Y5R5 561 aa26.29■■□□□ 1.8
RAB3D-202ENST00000589655 SPAG9O60271 1321 aaKnown RBP26.29■■□□□ 1.8
RAB3D-202ENST00000589655 ATP7AQ04656 1500 aa26.28■■□□□ 1.8
RAB3D-202ENST00000589655 INO80Q9ULG1 1556 aaPredicted RBP26.27■■□□□ 1.8
RAB3D-202ENST00000589655 SUPT6HQ7KZ85 1726 aaKnown RBP26.26■■□□□ 1.79
RAB3D-202ENST00000589655 CFDP1Q9UEE9 299 aaPredicted RBP26.26■■□□□ 1.79
RAB3D-202ENST00000589655 PLXNC1O60486 1568 aa26.25■■□□□ 1.79
RAB3D-202ENST00000589655 PTPRTO14522 1441 aa26.25■■□□□ 1.79
RAB3D-202ENST00000589655 CCNB3Q8WWL7 1395 aa26.25■■□□□ 1.79
RAB3D-202ENST00000589655 MROH2AA6NES4 1674 aa26.25■■□□□ 1.79
RAB3D-202ENST00000589655 PLEKHH2Q8IVE3 1493 aa26.24■■□□□ 1.79
RAB3D-202ENST00000589655 MTUS2Q5JR59 1369 aa26.22■■□□□ 1.79
RAB3D-202ENST00000589655 ZMYM3Q14202 1370 aa26.21■■□□□ 1.79
RAB3D-202ENST00000589655 A2MP01023 1474 aa26.21■■□□□ 1.79
RAB3D-202ENST00000589655 NPATQ14207 1427 aa26.21■■□□□ 1.79
RAB3D-202ENST00000589655 NCOA1Q15788 1441 aa26.21■■□□□ 1.79
RAB3D-202ENST00000589655 TIAM1Q13009 1591 aa26.2■■□□□ 1.79
RAB3D-202ENST00000589655 ZNF644Q9H582 1327 aaPredicted RBP26.19■■□□□ 1.78
RAB3D-202ENST00000589655 CLTCQ00610 1675 aaKnown RBP26.18■■□□□ 1.78
RAB3D-202ENST00000589655 LTBP4Q8N2S1 1624 aa26.17■■□□□ 1.78
RAB3D-202ENST00000589655 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
RAB3D-202ENST00000589655 EHBP1L1Q8N3D4 1523 aa26.15■■□□□ 1.78
RAB3D-202ENST00000589655 CAMSAP1Q5T5Y3 1602 aa26.14■■□□□ 1.78
RAB3D-202ENST00000589655 PTPRKQ15262 1439 aa26.12■■□□□ 1.77
RAB3D-202ENST00000589655 CEP162Q5TB80 1403 aa26.12■■□□□ 1.77
RAB3D-202ENST00000589655 ADGBQ8N7X0 1667 aa26.12■■□□□ 1.77
RAB3D-202ENST00000589655 GGT6Q6P531 493 aa26.1■■□□□ 1.77
RAB3D-202ENST00000589655 MYO3AQ8NEV4 1616 aa26.1■■□□□ 1.77
RAB3D-202ENST00000589655 ZNF142P52746 1687 aaPredicted RBP26.08■■□□□ 1.77
RAB3D-202ENST00000589655 NCKAP5LQ9HCH0 1330 aa26.06■■□□□ 1.76
RAB3D-202ENST00000589655 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
RAB3D-202ENST00000589655 CEP170BQ9Y4F5 1589 aaPredicted RBP26.04■■□□□ 1.76
RAB3D-202ENST00000589655 PPP6R1Q9UPN7 881 aa26.03■■□□□ 1.76
RAB3D-202ENST00000589655 DHX29Q7Z478 1369 aaKnown RBP26.02■■□□□ 1.76
RAB3D-202ENST00000589655 PLA2R1Q13018 1463 aa26.02■■□□□ 1.76
RAB3D-202ENST00000589655 NCOA2Q15596 1464 aa26.02■■□□□ 1.76
RAB3D-202ENST00000589655 IQSEC2Q5JU85 1478 aa26.01■■□□□ 1.75
RAB3D-202ENST00000589655 TCOF1Q13428 1488 aaKnown RBP26■■□□□ 1.75
RAB3D-202ENST00000589655 CAMSAP2Q08AD1 1489 aa25.98■■□□□ 1.75
RAB3D-202ENST00000589655 CCDC141Q6ZP82 1450 aa25.98■■□□□ 1.75
RAB3D-202ENST00000589655 ZNF335Q9H4Z2 1342 aaPredicted RBP25.97■■□□□ 1.75
RAB3D-202ENST00000589655 PKD2Q13563 968 aa25.95■■□□□ 1.74
RAB3D-202ENST00000589655 A2ML1A8K2U0 1454 aa25.93■■□□□ 1.74
RAB3D-202ENST00000589655 DNMT1P26358 1616 aaKnown RBP25.93■■□□□ 1.74
RAB3D-202ENST00000589655 KIF3BO15066 747 aa25.93■■□□□ 1.74
RAB3D-202ENST00000589655 DISP3Q9P2K9 1392 aa25.92■■□□□ 1.74
RAB3D-202ENST00000589655 FBXO31Q5XUX0 539 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms