RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
PTPN2-208ENST00000589216 ZMYM4Q5VZL5 1548 aa15.89■□□□□ 0.13
PTPN2-208ENST00000589216 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
PTPN2-208ENST00000589216 DENND4BO75064 1496 aaPredicted RBP15.89■□□□□ 0.13
PTPN2-208ENST00000589216 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
PTPN2-208ENST00000589216 VPS8Q8N3P4 1428 aa15.88■□□□□ 0.13
PTPN2-208ENST00000589216 SIGLEC1Q9BZZ2 1709 aa15.88■□□□□ 0.13
PTPN2-208ENST00000589216 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
PTPN2-208ENST00000589216 POGZQ7Z3K3 1410 aa15.87■□□□□ 0.13
PTPN2-208ENST00000589216 ITSN2Q9NZM3 1697 aa15.87■□□□□ 0.13
PTPN2-208ENST00000589216 ABCC1P33527 1531 aa15.86■□□□□ 0.13
PTPN2-208ENST00000589216 KDM4FA0A1W2PPD8 638 aa15.85■□□□□ 0.13
PTPN2-208ENST00000589216 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
PTPN2-208ENST00000589216 SCAPERQ9BY12 1400 aa15.84■□□□□ 0.13
PTPN2-208ENST00000589216 KDM5CP41229 1560 aa15.83■□□□□ 0.13
PTPN2-208ENST00000589216 ZFYVE16Q7Z3T8 1539 aa15.83■□□□□ 0.12
PTPN2-208ENST00000589216 MTUS2Q5JR59 1369 aa15.82■□□□□ 0.12
PTPN2-208ENST00000589216 YEATS2Q9ULM3 1422 aa15.82■□□□□ 0.12
PTPN2-208ENST00000589216 ARHGEF12Q9NZN5 1544 aa15.82■□□□□ 0.12
PTPN2-208ENST00000589216 GPATCH8Q9UKJ3 1502 aaKnown RBP15.82■□□□□ 0.12
PTPN2-208ENST00000589216 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
PTPN2-208ENST00000589216 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
PTPN2-208ENST00000589216 SYCP2Q9BX26 1530 aa15.79■□□□□ 0.12
PTPN2-208ENST00000589216 ZNF518AQ6AHZ1 1483 aa15.78■□□□□ 0.12
PTPN2-208ENST00000589216 BCORL1Q5H9F3 1711 aa15.78■□□□□ 0.12
PTPN2-208ENST00000589216 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
PTPN2-208ENST00000589216 ABCA6Q8N139 1617 aa15.78■□□□□ 0.12
PTPN2-208ENST00000589216 ADAMTSL3P82987 1691 aa15.77■□□□□ 0.12
PTPN2-208ENST00000589216 DIP2CQ9Y2E4 1556 aa15.77■□□□□ 0.11
PTPN2-208ENST00000589216 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.11
PTPN2-208ENST00000589216 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
PTPN2-208ENST00000589216 LRRC9Q6ZRR7 1453 aa15.75■□□□□ 0.11
PTPN2-208ENST00000589216 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
PTPN2-208ENST00000589216 MADDQ8WXG6 1647 aa15.75■□□□□ 0.11
PTPN2-208ENST00000589216 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
PTPN2-208ENST00000589216 MAP3K1Q13233 1512 aa15.74■□□□□ 0.11
PTPN2-208ENST00000589216 KIDINS220Q9ULH0 1771 aa15.74■□□□□ 0.11
PTPN2-208ENST00000589216 INO80Q9ULG1 1556 aaPredicted RBP15.71■□□□□ 0.11
PTPN2-208ENST00000589216 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
PTPN2-208ENST00000589216 RIMS1Q86UR5 1692 aaKnown RBP15.7■□□□□ 0.1
PTPN2-208ENST00000589216 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
PTPN2-208ENST00000589216 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
PTPN2-208ENST00000589216 MLH3Q9UHC1 1453 aa15.69■□□□□ 0.1
PTPN2-208ENST00000589216 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
PTPN2-208ENST00000589216 CAMSAP2Q08AD1 1489 aa15.68■□□□□ 0.1
PTPN2-208ENST00000589216 FER1L4A9Z1Z3 1794 aa15.67■□□□□ 0.1
PTPN2-208ENST00000589216 REREQ9P2R6 1566 aa15.67■□□□□ 0.1
PTPN2-208ENST00000589216 ATP10AO60312 1499 aa15.67■□□□□ 0.1
PTPN2-208ENST00000589216 CFDP1Q9UEE9 299 aaPredicted RBP15.67■□□□□ 0.1
PTPN2-208ENST00000589216 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
PTPN2-208ENST00000589216 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
PTPN2-208ENST00000589216 PLEKHH2Q8IVE3 1493 aa15.66■□□□□ 0.1
PTPN2-208ENST00000589216 KIAA1107Q9UPP5 1409 aa15.66■□□□□ 0.1
PTPN2-208ENST00000589216 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
PTPN2-208ENST00000589216 PTPRMP28827 1452 aa15.64■□□□□ 0.09
PTPN2-208ENST00000589216 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.09
PTPN2-208ENST00000589216 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
PTPN2-208ENST00000589216 ARID4BQ4LE39 1312 aaPredicted RBP15.63■□□□□ 0.09
PTPN2-208ENST00000589216 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
PTPN2-208ENST00000589216 ARHGEF5Q12774 1597 aa15.61■□□□□ 0.09
PTPN2-208ENST00000589216 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
PTPN2-208ENST00000589216 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
PTPN2-208ENST00000589216 AGLP35573 1532 aa15.59■□□□□ 0.09
PTPN2-208ENST00000589216 CROCC2H7BZ55 1655 aa15.57■□□□□ 0.08
PTPN2-208ENST00000589216 MLECQ14165 292 aa15.57■□□□□ 0.08
PTPN2-208ENST00000589216 MYT1LQ9UL68 1186 aa15.57■□□□□ 0.08
PTPN2-208ENST00000589216 SPAG9O60271 1321 aaKnown RBP15.57■□□□□ 0.08
PTPN2-208ENST00000589216 PTPN23Q9H3S7 1636 aa15.56■□□□□ 0.08
PTPN2-208ENST00000589216 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
PTPN2-208ENST00000589216 A2MP01023 1474 aa15.53■□□□□ 0.08
PTPN2-208ENST00000589216 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
PTPN2-208ENST00000589216 C3P01024 1663 aa15.52■□□□□ 0.08
PTPN2-208ENST00000589216 FOXD1Q16676 465 aa15.52■□□□□ 0.08
PTPN2-208ENST00000589216 FGD6Q6ZV73 1430 aa15.51■□□□□ 0.07
PTPN2-208ENST00000589216 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
PTPN2-208ENST00000589216 APLP2Q06481 763 aa15.5■□□□□ 0.07
PTPN2-208ENST00000589216 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
PTPN2-208ENST00000589216 DNMT1P26358 1616 aaKnown RBP15.5■□□□□ 0.07
PTPN2-208ENST00000589216 CLTCQ00610 1675 aaKnown RBP15.49■□□□□ 0.07
PTPN2-208ENST00000589216 LMTK3Q96Q04 1460 aa15.49■□□□□ 0.07
PTPN2-208ENST00000589216 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
PTPN2-208ENST00000589216 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
PTPN2-208ENST00000589216 PREX1Q8TCU6 1659 aa15.46■□□□□ 0.07
PTPN2-208ENST00000589216 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.06
PTPN2-208ENST00000589216 ABCC5O15440 1437 aa15.44■□□□□ 0.06
PTPN2-208ENST00000589216 DAPK1P53355 1430 aa15.43■□□□□ 0.06
PTPN2-208ENST00000589216 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
PTPN2-208ENST00000589216 MROH1Q8NDA8 1641 aa15.43■□□□□ 0.06
PTPN2-208ENST00000589216 DHX29Q7Z478 1369 aaKnown RBP15.42■□□□□ 0.06
PTPN2-208ENST00000589216 CEBPAP49715 358 aaPredicted RBP15.42■□□□□ 0.06
PTPN2-208ENST00000589216 EIF2AK4Q9P2K8 1649 aaKnown RBP15.42■□□□□ 0.06
PTPN2-208ENST00000589216 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
PTPN2-208ENST00000589216 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
PTPN2-208ENST00000589216 KDM5DQ9BY66 1539 aa15.38■□□□□ 0.05
PTPN2-208ENST00000589216 PPARGC1BQ86YN6 1023 aaKnown RBP15.38■□□□□ 0.05
PTPN2-208ENST00000589216 MYO3AQ8NEV4 1616 aa15.37■□□□□ 0.05
PTPN2-208ENST00000589216 DUOX2Q9NRD8 1548 aa15.37■□□□□ 0.05
PTPN2-208ENST00000589216 CEP152O94986 1710 aa15.37■□□□□ 0.05
PTPN2-208ENST00000589216 TSPY4P0CV99 314 aa15.36■□□□□ 0.05
PTPN2-208ENST00000589216 TSPY10P0CW01 314 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms