RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 LRRIQ1Q96JM4 1722 aa30.73■■■□□ 2.51
CCDC43-204ENST00000588687 SCAPERQ9BY12 1400 aa30.68■■■□□ 2.5
CCDC43-204ENST00000588687 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.5
CCDC43-204ENST00000588687 CHIC1Q5VXU3 224 aa30.64■■■□□ 2.5
CCDC43-204ENST00000588687 FER1L4A9Z1Z3 1794 aa30.64■■■□□ 2.49
CCDC43-204ENST00000588687 TROQ12816 1431 aaPredicted RBP30.63■■■□□ 2.49
CCDC43-204ENST00000588687 EHMT2Q96KQ7 1210 aa30.62■■■□□ 2.49
CCDC43-204ENST00000588687 KDM5CP41229 1560 aa30.6■■■□□ 2.49
CCDC43-204ENST00000588687 ARHGEF12Q9NZN5 1544 aa30.59■■■□□ 2.49
CCDC43-204ENST00000588687 ATP10AO60312 1499 aa30.56■■■□□ 2.48
CCDC43-204ENST00000588687 C9orf84Q5VXU9 1444 aa30.56■■■□□ 2.48
CCDC43-204ENST00000588687 ZNF518AQ6AHZ1 1483 aa30.54■■■□□ 2.48
CCDC43-204ENST00000588687 CDC42BPBQ9Y5S2 1711 aa30.53■■■□□ 2.48
CCDC43-204ENST00000588687 ARHGAP5Q13017 1502 aa30.53■■■□□ 2.48
CCDC43-204ENST00000588687 EFCAB2Q5VUJ9 269 aa30.52■■■□□ 2.48
CCDC43-204ENST00000588687 ATP1B4Q9UN42 357 aaPredicted RBP30.51■■■□□ 2.47
CCDC43-204ENST00000588687 CDK11AQ9UQ88 783 aaPredicted RBP30.51■■■□□ 2.47
CCDC43-204ENST00000588687 PREX2Q70Z35 1606 aa30.51■■■□□ 2.47
CCDC43-204ENST00000588687 CLIP1P30622 1438 aa30.5■■■□□ 2.47
CCDC43-204ENST00000588687 FBXO41Q8TF61 875 aa30.5■■■□□ 2.47
CCDC43-204ENST00000588687 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
CCDC43-204ENST00000588687 REREQ9P2R6 1566 aa30.47■■■□□ 2.47
CCDC43-204ENST00000588687 CASKIN1Q8WXD9 1431 aa30.47■■■□□ 2.47
CCDC43-204ENST00000588687 ABCA6Q8N139 1617 aa30.45■■■□□ 2.47
CCDC43-204ENST00000588687 ABCC1P33527 1531 aa30.45■■■□□ 2.47
CCDC43-204ENST00000588687 CCDC18Q5T9S5 1454 aa30.44■■■□□ 2.46
CCDC43-204ENST00000588687 HSPA2P54652 639 aa30.44■■■□□ 2.46
CCDC43-204ENST00000588687 MLECQ14165 292 aa30.44■■■□□ 2.46
CCDC43-204ENST00000588687 PREX1Q8TCU6 1659 aa30.42■■■□□ 2.46
CCDC43-204ENST00000588687 ITSN2Q9NZM3 1697 aa30.41■■■□□ 2.46
CCDC43-204ENST00000588687 CDC42BPAQ5VT25 1732 aa30.39■■■□□ 2.46
CCDC43-204ENST00000588687 MLH3Q9UHC1 1453 aa30.39■■■□□ 2.46
CCDC43-204ENST00000588687 AFAP1Q8N556 730 aa30.39■■■□□ 2.46
CCDC43-204ENST00000588687 PLPPR3Q6T4P5 718 aa30.37■■■□□ 2.45
CCDC43-204ENST00000588687 FYCO1Q9BQS8 1478 aa30.37■■■□□ 2.45
CCDC43-204ENST00000588687 TRAPPC8Q9Y2L5 1435 aa30.35■■■□□ 2.45
CCDC43-204ENST00000588687 AGLP35573 1532 aa30.32■■■□□ 2.44
CCDC43-204ENST00000588687 KIDINS220Q9ULH0 1771 aa30.32■■■□□ 2.44
CCDC43-204ENST00000588687 C3P01024 1663 aa30.27■■■□□ 2.44
CCDC43-204ENST00000588687 STRCQ7RTU9 1775 aa30.26■■■□□ 2.44
CCDC43-204ENST00000588687 CEBPAP49715 358 aaPredicted RBP30.26■■■□□ 2.43
CCDC43-204ENST00000588687 SAMD9LQ8IVG5 1584 aa30.26■■■□□ 2.43
CCDC43-204ENST00000588687 SYCP2Q9BX26 1530 aa30.2■■■□□ 2.42
CCDC43-204ENST00000588687 SETD1BQ9UPS6 1966 aaKnown RBP30.19■■■□□ 2.42
CCDC43-204ENST00000588687 GPATCH8Q9UKJ3 1502 aaKnown RBP30.19■■■□□ 2.42
CCDC43-204ENST00000588687 UHRF1BP1Q6BDS2 1440 aa30.18■■■□□ 2.42
CCDC43-204ENST00000588687 INO80Q9ULG1 1556 aaPredicted RBP30.13■■■□□ 2.41
CCDC43-204ENST00000588687 CERKQ8TCT0 537 aa30.12■■■□□ 2.41
CCDC43-204ENST00000588687 MYT1LQ9UL68 1186 aa30.12■■■□□ 2.41
CCDC43-204ENST00000588687 PLXNC1O60486 1568 aa30.11■■■□□ 2.41
CCDC43-204ENST00000588687 MROH2AA6NES4 1674 aa30.11■■■□□ 2.41
CCDC43-204ENST00000588687 ATP7AQ04656 1500 aa30.08■■■□□ 2.41
CCDC43-204ENST00000588687 CNTLNQ9NXG0 1405 aa30.08■■■□□ 2.41
CCDC43-204ENST00000588687 KIAA1107Q9UPP5 1409 aa30.06■■■□□ 2.4
CCDC43-204ENST00000588687 SUPT6HQ7KZ85 1726 aaKnown RBP30.04■■■□□ 2.4
CCDC43-204ENST00000588687 PLEKHH2Q8IVE3 1493 aa30.03■■■□□ 2.4
CCDC43-204ENST00000588687 TIAM1Q13009 1591 aa30.03■■■□□ 2.4
CCDC43-204ENST00000588687 PTPRTO14522 1441 aa30■■■□□ 2.39
CCDC43-204ENST00000588687 ZNF777Q9ULD5 760 aaPredicted RBP30■■■□□ 2.39
CCDC43-204ENST00000588687 NPATQ14207 1427 aa29.99■■■□□ 2.39
CCDC43-204ENST00000588687 SPAG9O60271 1321 aaKnown RBP29.98■■■□□ 2.39
CCDC43-204ENST00000588687 HNRNPMP52272 730 aaKnown RBP eCLIP29.98■■■□□ 2.39
CCDC43-204ENST00000588687 NCOA1Q15788 1441 aa29.97■■■□□ 2.39
CCDC43-204ENST00000588687 EHBP1L1Q8N3D4 1523 aa29.97■■■□□ 2.39
CCDC43-204ENST00000588687 CCNB3Q8WWL7 1395 aa29.97■■■□□ 2.39
CCDC43-204ENST00000588687 CLTCQ00610 1675 aaKnown RBP29.96■■■□□ 2.39
CCDC43-204ENST00000588687 DMRT2Q9Y5R5 561 aa29.96■■■□□ 2.39
CCDC43-204ENST00000588687 A2MP01023 1474 aa29.95■■■□□ 2.39
CCDC43-204ENST00000588687 MTUS2Q5JR59 1369 aa29.94■■■□□ 2.38
CCDC43-204ENST00000588687 CFDP1Q9UEE9 299 aaPredicted RBP29.94■■■□□ 2.38
CCDC43-204ENST00000588687 LTBP4Q8N2S1 1624 aa29.93■■■□□ 2.38
CCDC43-204ENST00000588687 ZNF142P52746 1687 aaPredicted RBP29.93■■■□□ 2.38
CCDC43-204ENST00000588687 ADGBQ8N7X0 1667 aa29.93■■■□□ 2.38
CCDC43-204ENST00000588687 ESF1Q9H501 851 aaKnown RBP29.93■■■□□ 2.38
CCDC43-204ENST00000588687 MBD5Q9P267 1494 aa29.92■■■□□ 2.38
CCDC43-204ENST00000588687 MYO3AQ8NEV4 1616 aa29.91■■■□□ 2.38
CCDC43-204ENST00000588687 ZMYM3Q14202 1370 aa29.9■■■□□ 2.38
CCDC43-204ENST00000588687 CAMSAP1Q5T5Y3 1602 aa29.89■■■□□ 2.38
CCDC43-204ENST00000588687 CEP162Q5TB80 1403 aa29.88■■■□□ 2.37
CCDC43-204ENST00000588687 ZNF644Q9H582 1327 aaPredicted RBP29.85■■■□□ 2.37
CCDC43-204ENST00000588687 PTPRKQ15262 1439 aa29.85■■■□□ 2.37
CCDC43-204ENST00000588687 CEP170BQ9Y4F5 1589 aaPredicted RBP29.82■■■□□ 2.36
CCDC43-204ENST00000588687 RTEL1-TNFRSF6BF6WH68 1400 aa29.8■■■□□ 2.36
CCDC43-204ENST00000588687 PLA2R1Q13018 1463 aa29.79■■■□□ 2.36
CCDC43-204ENST00000588687 IQSEC2Q5JU85 1478 aa29.79■■■□□ 2.36
CCDC43-204ENST00000588687 TCOF1Q13428 1488 aaKnown RBP29.76■■■□□ 2.35
CCDC43-204ENST00000588687 NCOA2Q15596 1464 aa29.75■■■□□ 2.35
CCDC43-204ENST00000588687 CAMSAP2Q08AD1 1489 aa29.74■■■□□ 2.35
CCDC43-204ENST00000588687 CCDC141Q6ZP82 1450 aa29.73■■■□□ 2.35
CCDC43-204ENST00000588687 GGT6Q6P531 493 aa29.71■■■□□ 2.35
CCDC43-204ENST00000588687 DHX29Q7Z478 1369 aaKnown RBP29.7■■■□□ 2.35
CCDC43-204ENST00000588687 PPP6R1Q9UPN7 881 aa29.7■■■□□ 2.35
CCDC43-204ENST00000588687 FAM135AQ9P2D6 1515 aa29.69■■■□□ 2.34
CCDC43-204ENST00000588687 DNMT1P26358 1616 aaKnown RBP29.67■■■□□ 2.34
CCDC43-204ENST00000588687 ARHGEF5Q12774 1597 aa29.67■■■□□ 2.34
CCDC43-204ENST00000588687 NCKAP5LQ9HCH0 1330 aa29.67■■■□□ 2.34
CCDC43-204ENST00000588687 A2ML1A8K2U0 1454 aa29.66■■■□□ 2.34
CCDC43-204ENST00000588687 KDM5DQ9BY66 1539 aa29.66■■■□□ 2.34
CCDC43-204ENST00000588687 PZPP20742 1482 aa29.61■■■□□ 2.33
CCDC43-204ENST00000588687 ZNF335Q9H4Z2 1342 aaPredicted RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms