RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 ARHGAP35Q9NRY4 1499 aa25.05■■□□□ 1.6
HDAC5-206ENST00000587776 KIF14Q15058 1648 aa25.04■■□□□ 1.6
HDAC5-206ENST00000587776 PLCH2O75038 1416 aa25.04■■□□□ 1.6
HDAC5-206ENST00000587776 SCAPERQ9BY12 1400 aa25.03■■□□□ 1.6
HDAC5-206ENST00000587776 LMTK3Q96Q04 1460 aa25.03■■□□□ 1.6
HDAC5-206ENST00000587776 PLPPR3Q6T4P5 718 aa25.03■■□□□ 1.6
HDAC5-206ENST00000587776 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
HDAC5-206ENST00000587776 LRRIQ1Q96JM4 1722 aa25■■□□□ 1.59
HDAC5-206ENST00000587776 MLECQ14165 292 aa24.97■■□□□ 1.59
HDAC5-206ENST00000587776 ARHGAP5Q13017 1502 aa24.96■■□□□ 1.59
HDAC5-206ENST00000587776 CLIP1P30622 1438 aa24.96■■□□□ 1.59
HDAC5-206ENST00000587776 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
HDAC5-206ENST00000587776 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
HDAC5-206ENST00000587776 TROQ12816 1431 aaPredicted RBP24.94■■□□□ 1.58
HDAC5-206ENST00000587776 FBXO41Q8TF61 875 aa24.93■■□□□ 1.58
HDAC5-206ENST00000587776 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
HDAC5-206ENST00000587776 ATP10AO60312 1499 aa24.92■■□□□ 1.58
HDAC5-206ENST00000587776 ZNF518AQ6AHZ1 1483 aa24.91■■□□□ 1.58
HDAC5-206ENST00000587776 CDC42BPBQ9Y5S2 1711 aa24.89■■□□□ 1.58
HDAC5-206ENST00000587776 HSPA2P54652 639 aa24.88■■□□□ 1.57
HDAC5-206ENST00000587776 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
HDAC5-206ENST00000587776 ARHGEF12Q9NZN5 1544 aa24.87■■□□□ 1.57
HDAC5-206ENST00000587776 KDM5CP41229 1560 aa24.86■■□□□ 1.57
HDAC5-206ENST00000587776 PREX2Q70Z35 1606 aa24.86■■□□□ 1.57
HDAC5-206ENST00000587776 PREX1Q8TCU6 1659 aa24.85■■□□□ 1.57
HDAC5-206ENST00000587776 CCDC18Q5T9S5 1454 aa24.84■■□□□ 1.57
HDAC5-206ENST00000587776 DIP2CQ9Y2E4 1556 aa24.81■■□□□ 1.56
HDAC5-206ENST00000587776 ITSN2Q9NZM3 1697 aa24.81■■□□□ 1.56
HDAC5-206ENST00000587776 AFAP1Q8N556 730 aa24.8■■□□□ 1.56
HDAC5-206ENST00000587776 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
HDAC5-206ENST00000587776 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
HDAC5-206ENST00000587776 CDC42BPAQ5VT25 1732 aa24.78■■□□□ 1.56
HDAC5-206ENST00000587776 ABCC1P33527 1531 aa24.77■■□□□ 1.56
HDAC5-206ENST00000587776 REREQ9P2R6 1566 aa24.75■■□□□ 1.55
HDAC5-206ENST00000587776 FYCO1Q9BQS8 1478 aa24.73■■□□□ 1.55
HDAC5-206ENST00000587776 MLH3Q9UHC1 1453 aa24.72■■□□□ 1.55
HDAC5-206ENST00000587776 CEBPAP49715 358 aaPredicted RBP24.72■■□□□ 1.55
HDAC5-206ENST00000587776 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
HDAC5-206ENST00000587776 C3P01024 1663 aa24.7■■□□□ 1.54
HDAC5-206ENST00000587776 TRAPPC8Q9Y2L5 1435 aa24.69■■□□□ 1.54
HDAC5-206ENST00000587776 KIDINS220Q9ULH0 1771 aa24.69■■□□□ 1.54
HDAC5-206ENST00000587776 UHRF1BP1Q6BDS2 1440 aa24.68■■□□□ 1.54
HDAC5-206ENST00000587776 ESF1Q9H501 851 aaKnown RBP24.67■■□□□ 1.54
HDAC5-206ENST00000587776 AGLP35573 1532 aa24.65■■□□□ 1.54
HDAC5-206ENST00000587776 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
HDAC5-206ENST00000587776 SAMD9LQ8IVG5 1584 aa24.63■■□□□ 1.53
HDAC5-206ENST00000587776 ZNF777Q9ULD5 760 aaPredicted RBP24.63■■□□□ 1.53
HDAC5-206ENST00000587776 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
HDAC5-206ENST00000587776 CERKQ8TCT0 537 aa24.62■■□□□ 1.53
HDAC5-206ENST00000587776 SUPT6HQ7KZ85 1726 aaKnown RBP24.59■■□□□ 1.53
HDAC5-206ENST00000587776 DMRT2Q9Y5R5 561 aa24.57■■□□□ 1.52
HDAC5-206ENST00000587776 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
HDAC5-206ENST00000587776 CNTLNQ9NXG0 1405 aa24.55■■□□□ 1.52
HDAC5-206ENST00000587776 MROH2AA6NES4 1674 aa24.55■■□□□ 1.52
HDAC5-206ENST00000587776 ATP7AQ04656 1500 aa24.53■■□□□ 1.52
HDAC5-206ENST00000587776 SPAG9O60271 1321 aaKnown RBP24.53■■□□□ 1.52
HDAC5-206ENST00000587776 CCNB3Q8WWL7 1395 aa24.52■■□□□ 1.52
HDAC5-206ENST00000587776 HNRNPMP52272 730 aaKnown RBP eCLIP24.51■■□□□ 1.51
HDAC5-206ENST00000587776 MTUS2Q5JR59 1369 aa24.51■■□□□ 1.51
HDAC5-206ENST00000587776 PLEKHH2Q8IVE3 1493 aa24.51■■□□□ 1.51
HDAC5-206ENST00000587776 INO80Q9ULG1 1556 aaPredicted RBP24.5■■□□□ 1.51
HDAC5-206ENST00000587776 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
HDAC5-206ENST00000587776 CLTCQ00610 1675 aaKnown RBP24.49■■□□□ 1.51
HDAC5-206ENST00000587776 KIAA1107Q9UPP5 1409 aa24.46■■□□□ 1.51
HDAC5-206ENST00000587776 ADGBQ8N7X0 1667 aa24.46■■□□□ 1.51
HDAC5-206ENST00000587776 PTPRTO14522 1441 aa24.44■■□□□ 1.5
HDAC5-206ENST00000587776 PLXNC1O60486 1568 aa24.44■■□□□ 1.5
HDAC5-206ENST00000587776 EHBP1L1Q8N3D4 1523 aa24.44■■□□□ 1.5
HDAC5-206ENST00000587776 TIAM1Q13009 1591 aa24.43■■□□□ 1.5
HDAC5-206ENST00000587776 A2MP01023 1474 aa24.43■■□□□ 1.5
HDAC5-206ENST00000587776 NPATQ14207 1427 aa24.42■■□□□ 1.5
HDAC5-206ENST00000587776 CAMSAP1Q5T5Y3 1602 aa24.4■■□□□ 1.5
HDAC5-206ENST00000587776 NCOA1Q15788 1441 aa24.4■■□□□ 1.5
HDAC5-206ENST00000587776 ZMYM3Q14202 1370 aa24.4■■□□□ 1.5
HDAC5-206ENST00000587776 MYO3AQ8NEV4 1616 aa24.39■■□□□ 1.5
HDAC5-206ENST00000587776 ZNF142P52746 1687 aaPredicted RBP24.38■■□□□ 1.49
HDAC5-206ENST00000587776 GGT6Q6P531 493 aa24.35■■□□□ 1.49
HDAC5-206ENST00000587776 CEP162Q5TB80 1403 aa24.33■■□□□ 1.49
HDAC5-206ENST00000587776 ZNF644Q9H582 1327 aaPredicted RBP24.33■■□□□ 1.48
HDAC5-206ENST00000587776 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
HDAC5-206ENST00000587776 LTBP4Q8N2S1 1624 aa24.32■■□□□ 1.48
HDAC5-206ENST00000587776 PTPRKQ15262 1439 aa24.28■■□□□ 1.48
HDAC5-206ENST00000587776 MBD5Q9P267 1494 aa24.28■■□□□ 1.48
HDAC5-206ENST00000587776 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
HDAC5-206ENST00000587776 IQSEC2Q5JU85 1478 aa24.26■■□□□ 1.47
HDAC5-206ENST00000587776 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
HDAC5-206ENST00000587776 CAMSAP2Q08AD1 1489 aa24.25■■□□□ 1.47
HDAC5-206ENST00000587776 PLA2R1Q13018 1463 aa24.25■■□□□ 1.47
HDAC5-206ENST00000587776 PPP6R1Q9UPN7 881 aa24.24■■□□□ 1.47
HDAC5-206ENST00000587776 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
HDAC5-206ENST00000587776 CCDC141Q6ZP82 1450 aa24.24■■□□□ 1.47
HDAC5-206ENST00000587776 DISP3Q9P2K9 1392 aa24.23■■□□□ 1.47
HDAC5-206ENST00000587776 DHX29Q7Z478 1369 aaKnown RBP24.21■■□□□ 1.47
HDAC5-206ENST00000587776 PKD2Q13563 968 aa24.21■■□□□ 1.47
HDAC5-206ENST00000587776 POLR1AO95602 1720 aaPredicted RBP24.19■■□□□ 1.46
HDAC5-206ENST00000587776 KDM5DQ9BY66 1539 aa24.19■■□□□ 1.46
HDAC5-206ENST00000587776 TCOF1Q13428 1488 aaKnown RBP24.19■■□□□ 1.46
HDAC5-206ENST00000587776 DNMT1P26358 1616 aaKnown RBP24.18■■□□□ 1.46
HDAC5-206ENST00000587776 A2ML1A8K2U0 1454 aa24.18■■□□□ 1.46
HDAC5-206ENST00000587776 SPATA31D1Q6ZQQ2 1576 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms