RNA–Protein interactions for RNA: ENST00000587708.6

PSENEN-202, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-202ENST00000587708 ZCCHC11Q5TAX3 1644 aaKnown RBP25.77■■□□□ 1.72
PSENEN-202ENST00000587708 ABCC5O15440 1437 aa25.75■■□□□ 1.71
PSENEN-202ENST00000587708 ZNF644Q9H582 1327 aaPredicted RBP25.72■■□□□ 1.71
PSENEN-202ENST00000587708 GCC2Q8IWJ2 1684 aa25.71■■□□□ 1.71
PSENEN-202ENST00000587708 RSPH4AQ5TD94 716 aa25.71■■□□□ 1.71
PSENEN-202ENST00000587708 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
PSENEN-202ENST00000587708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.67■■□□□ 1.7
PSENEN-202ENST00000587708 CHIC2Q9UKJ5 165 aa25.66■■□□□ 1.7
PSENEN-202ENST00000587708 ZNF777Q9ULD5 760 aaPredicted RBP25.66■■□□□ 1.7
PSENEN-202ENST00000587708 ADGRL2O95490 1459 aa25.64■■□□□ 1.7
PSENEN-202ENST00000587708 SHANK2Q9UPX8 1470 aa25.64■■□□□ 1.7
PSENEN-202ENST00000587708 RRP7BPQ9NSQ0 103 aa25.64■■□□□ 1.69
PSENEN-202ENST00000587708 ARHGEF5Q12774 1597 aa25.63■■□□□ 1.69
PSENEN-202ENST00000587708 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
PSENEN-202ENST00000587708 CDC42BPBQ9Y5S2 1711 aa25.62■■□□□ 1.69
PSENEN-202ENST00000587708 MAPKBP1O60336 1514 aa25.61■■□□□ 1.69
PSENEN-202ENST00000587708 CROCC2H7BZ55 1655 aa25.6■■□□□ 1.69
PSENEN-202ENST00000587708 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
PSENEN-202ENST00000587708 NPM1P06748 294 aaKnown RBP eCLIP25.6■■□□□ 1.69
PSENEN-202ENST00000587708 TTC37Q6PGP7 1564 aa25.6■■□□□ 1.69
PSENEN-202ENST00000587708 WDR7Q9Y4E6 1490 aa25.6■■□□□ 1.69
PSENEN-202ENST00000587708 PLCH2O75038 1416 aa25.59■■□□□ 1.69
PSENEN-202ENST00000587708 ANKRD30AQ9BXX3 1397 aa25.59■■□□□ 1.69
PSENEN-202ENST00000587708 ADGBQ8N7X0 1667 aa25.59■■□□□ 1.69
PSENEN-202ENST00000587708 TIMELESSQ9UNS1 1208 aa25.59■■□□□ 1.69
PSENEN-202ENST00000587708 NCOA1Q15788 1441 aa25.59■■□□□ 1.69
PSENEN-202ENST00000587708 TSPY4P0CV99 314 aa25.58■■□□□ 1.69
PSENEN-202ENST00000587708 TSPY10P0CW01 314 aa25.58■■□□□ 1.69
PSENEN-202ENST00000587708 KCNH8Q96L42 1107 aa25.58■■□□□ 1.69
PSENEN-202ENST00000587708 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.69
PSENEN-202ENST00000587708 KIAA1107Q9UPP5 1409 aa25.58■■□□□ 1.69
PSENEN-202ENST00000587708 ARHGAP5Q13017 1502 aa25.56■■□□□ 1.68
PSENEN-202ENST00000587708 MBD5Q9P267 1494 aa25.56■■□□□ 1.68
PSENEN-202ENST00000587708 EFCAB2Q5VUJ9 269 aa25.55■■□□□ 1.68
PSENEN-202ENST00000587708 SAMD9LQ8IVG5 1584 aa25.54■■□□□ 1.68
PSENEN-202ENST00000587708 CCDC141Q6ZP82 1450 aa25.52■■□□□ 1.68
PSENEN-202ENST00000587708 C9orf84Q5VXU9 1444 aa25.51■■□□□ 1.67
PSENEN-202ENST00000587708 ASXL2Q76L83 1435 aa25.49■■□□□ 1.67
PSENEN-202ENST00000587708 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.67
PSENEN-202ENST00000587708 ABCA9Q8IUA7 1624 aa25.46■■□□□ 1.67
PSENEN-202ENST00000587708 MAST1Q9Y2H9 1570 aa25.46■■□□□ 1.67
PSENEN-202ENST00000587708 TRIM52Q96A61 297 aa25.45■■□□□ 1.67
PSENEN-202ENST00000587708 KDM6BO15054 1643 aa25.43■■□□□ 1.66
PSENEN-202ENST00000587708 ANKRD50Q9ULJ7 1429 aa25.42■■□□□ 1.66
PSENEN-202ENST00000587708 SYCP2Q9BX26 1530 aa25.41■■□□□ 1.66
PSENEN-202ENST00000587708 MPHOSPH9Q99550 1183 aa25.41■■□□□ 1.66
PSENEN-202ENST00000587708 ABCC1P33527 1531 aa25.37■■□□□ 1.65
PSENEN-202ENST00000587708 KIF15Q9NS87 1388 aa25.36■■□□□ 1.65
PSENEN-202ENST00000587708 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
PSENEN-202ENST00000587708 SIN3AQ96ST3 1273 aa25.34■■□□□ 1.65
PSENEN-202ENST00000587708 PLXNC1O60486 1568 aa25.33■■□□□ 1.64
PSENEN-202ENST00000587708 FANCAO15360 1455 aa25.32■■□□□ 1.64
PSENEN-202ENST00000587708 NEUROD1Q13562 356 aa25.32■■□□□ 1.64
PSENEN-202ENST00000587708 ARHGEF12Q9NZN5 1544 aa25.31■■□□□ 1.64
PSENEN-202ENST00000587708 RTEL1-TNFRSF6BF6WH68 1400 aa25.31■■□□□ 1.64
PSENEN-202ENST00000587708 RIMBP3CA6NJZ7 1639 aa25.31■■□□□ 1.64
PSENEN-202ENST00000587708 RIMBP3BA6NNM3 1639 aa25.31■■□□□ 1.64
PSENEN-202ENST00000587708 RIMBP3Q9UFD9 1639 aa25.31■■□□□ 1.64
PSENEN-202ENST00000587708 DENND4BO75064 1496 aaPredicted RBP25.3■■□□□ 1.64
PSENEN-202ENST00000587708 SLC4A1APQ9BWU0 796 aaKnown RBP25.29■■□□□ 1.64
PSENEN-202ENST00000587708 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
PSENEN-202ENST00000587708 TONSLQ96HA7 1378 aa25.26■■□□□ 1.63
PSENEN-202ENST00000587708 CYB5RLQ6IPT4 315 aa25.26■■□□□ 1.63
PSENEN-202ENST00000587708 PZPP20742 1482 aa25.25■■□□□ 1.63
PSENEN-202ENST00000587708 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
PSENEN-202ENST00000587708 CFAP74Q9C0B2 1584 aa25.25■■□□□ 1.63
PSENEN-202ENST00000587708 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
PSENEN-202ENST00000587708 CD109Q6YHK3 1445 aa25.23■■□□□ 1.63
PSENEN-202ENST00000587708 ANKRD30BQ9BXX2 1392 aa25.23■■□□□ 1.63
PSENEN-202ENST00000587708 TRAPPC8Q9Y2L5 1435 aa25.23■■□□□ 1.63
PSENEN-202ENST00000587708 ERBINQ96RT1 1412 aa25.21■■□□□ 1.63
PSENEN-202ENST00000587708 SPAG9O60271 1321 aaKnown RBP25.21■■□□□ 1.63
PSENEN-202ENST00000587708 ADGRL1O94910 1474 aa25.21■■□□□ 1.63
PSENEN-202ENST00000587708 NUP155O75694 1391 aa25.21■■□□□ 1.63
PSENEN-202ENST00000587708 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
PSENEN-202ENST00000587708 GLI2P10070 1586 aa25.15■■□□□ 1.62
PSENEN-202ENST00000587708 AFAP1Q8N556 730 aa25.14■■□□□ 1.62
PSENEN-202ENST00000587708 NEO1Q92859 1461 aa25.14■■□□□ 1.62
PSENEN-202ENST00000587708 UNC13BO14795 1591 aa25.14■■□□□ 1.61
PSENEN-202ENST00000587708 RPRD2Q5VT52 1461 aaKnown RBP25.13■■□□□ 1.61
PSENEN-202ENST00000587708 PKD2Q13563 968 aa25.13■■□□□ 1.61
PSENEN-202ENST00000587708 ZFYVE16Q7Z3T8 1539 aa25.13■■□□□ 1.61
PSENEN-202ENST00000587708 ZNF518AQ6AHZ1 1483 aa25.12■■□□□ 1.61
PSENEN-202ENST00000587708 DIEXFQ68CQ4 756 aaKnown RBP25.1■■□□□ 1.61
PSENEN-202ENST00000587708 INO80Q9ULG1 1556 aaPredicted RBP25.1■■□□□ 1.61
PSENEN-202ENST00000587708 ATP7AQ04656 1500 aa25.09■■□□□ 1.61
PSENEN-202ENST00000587708 MAGI2Q86UL8 1455 aa25.08■■□□□ 1.6
PSENEN-202ENST00000587708 FAM135AQ9P2D6 1515 aa25.07■■□□□ 1.6
PSENEN-202ENST00000587708 FOXD1Q16676 465 aa25.07■■□□□ 1.6
PSENEN-202ENST00000587708 MAP3K4Q9Y6R4 1608 aa25.05■■□□□ 1.6
PSENEN-202ENST00000587708 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
PSENEN-202ENST00000587708 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
PSENEN-202ENST00000587708 DHX29Q7Z478 1369 aaKnown RBP25.02■■□□□ 1.6
PSENEN-202ENST00000587708 MLH3Q9UHC1 1453 aa25.02■■□□□ 1.6
PSENEN-202ENST00000587708 KDM5CP41229 1560 aa25.01■■□□□ 1.59
PSENEN-202ENST00000587708 EIF2AK4Q9P2K8 1649 aaKnown RBP24.99■■□□□ 1.59
PSENEN-202ENST00000587708 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
PSENEN-202ENST00000587708 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
PSENEN-202ENST00000587708 DIP2BQ9P265 1576 aa24.95■■□□□ 1.58
PSENEN-202ENST00000587708 KIDINS220Q9ULH0 1771 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms