RNA–Protein interactions for RNA: ENST00000586410.2

TCF3-209, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-209ENST00000586410 ADGRL1O94910 1474 aa21.48■■□□□ 1.03
TCF3-209ENST00000586410 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
TCF3-209ENST00000586410 RAPGEF3O95398 923 aa21.47■■□□□ 1.03
TCF3-209ENST00000586410 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
TCF3-209ENST00000586410 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
TCF3-209ENST00000586410 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
TCF3-209ENST00000586410 EFCAB2Q5VUJ9 269 aa21.43■■□□□ 1.02
TCF3-209ENST00000586410 POGZQ7Z3K3 1410 aa21.43■■□□□ 1.02
TCF3-209ENST00000586410 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
TCF3-209ENST00000586410 ABCC1P33527 1531 aa21.42■■□□□ 1.02
TCF3-209ENST00000586410 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
TCF3-209ENST00000586410 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
TCF3-209ENST00000586410 SUPT6HQ7KZ85 1726 aaKnown RBP21.4■■□□□ 1.02
TCF3-209ENST00000586410 SAMD9LQ8IVG5 1584 aa21.4■■□□□ 1.02
TCF3-209ENST00000586410 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.01
TCF3-209ENST00000586410 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.01
TCF3-209ENST00000586410 KDM5CP41229 1560 aa21.38■■□□□ 1.01
TCF3-209ENST00000586410 NCOA2Q15596 1464 aa21.38■■□□□ 1.01
TCF3-209ENST00000586410 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
TCF3-209ENST00000586410 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
TCF3-209ENST00000586410 KDM4FA0A1W2PPD8 638 aa21.34■■□□□ 1.01
TCF3-209ENST00000586410 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
TCF3-209ENST00000586410 YEATS2Q9ULM3 1422 aa21.33■■□□□ 1.01
TCF3-209ENST00000586410 KANK4Q5T7N3 995 aaPredicted RBP21.33■■□□□ 1.01
TCF3-209ENST00000586410 MAGI2Q86UL8 1455 aa21.32■■□□□ 1
TCF3-209ENST00000586410 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
TCF3-209ENST00000586410 SYCP2Q9BX26 1530 aa21.32■■□□□ 1
TCF3-209ENST00000586410 SIGLEC1Q9BZZ2 1709 aa21.32■■□□□ 1
TCF3-209ENST00000586410 HECW2Q9P2P5 1572 aa21.29■■□□□ 1
TCF3-209ENST00000586410 AFAP1Q8N556 730 aa21.28■■□□□ 1
TCF3-209ENST00000586410 CFDP1Q9UEE9 299 aaPredicted RBP21.28■■□□□ 1
TCF3-209ENST00000586410 KIAA1107Q9UPP5 1409 aa21.27■■□□□ 1
TCF3-209ENST00000586410 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
TCF3-209ENST00000586410 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
TCF3-209ENST00000586410 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
TCF3-209ENST00000586410 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
TCF3-209ENST00000586410 DIP2CQ9Y2E4 1556 aa21.24■□□□□ 0.99
TCF3-209ENST00000586410 KIDINS220Q9ULH0 1771 aa21.24■□□□□ 0.99
TCF3-209ENST00000586410 ZNF644Q9H582 1327 aaPredicted RBP21.24■□□□□ 0.99
TCF3-209ENST00000586410 BCORL1Q5H9F3 1711 aa21.23■□□□□ 0.99
TCF3-209ENST00000586410 ADAMTSL3P82987 1691 aa21.22■□□□□ 0.99
TCF3-209ENST00000586410 MBD5Q9P267 1494 aa21.22■□□□□ 0.99
TCF3-209ENST00000586410 CAMSAP2Q08AD1 1489 aa21.21■□□□□ 0.99
TCF3-209ENST00000586410 INO80Q9ULG1 1556 aaPredicted RBP21.21■□□□□ 0.99
TCF3-209ENST00000586410 ATP10AO60312 1499 aa21.2■□□□□ 0.98
TCF3-209ENST00000586410 HNRNPMP52272 730 aaKnown RBP eCLIP21.2■□□□□ 0.98
TCF3-209ENST00000586410 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
TCF3-209ENST00000586410 REREQ9P2R6 1566 aa21.19■□□□□ 0.98
TCF3-209ENST00000586410 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
TCF3-209ENST00000586410 APLP2Q06481 763 aa21.17■□□□□ 0.98
TCF3-209ENST00000586410 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
TCF3-209ENST00000586410 ATP7AQ04656 1500 aa21.16■□□□□ 0.98
TCF3-209ENST00000586410 MADDQ8WXG6 1647 aa21.15■□□□□ 0.98
TCF3-209ENST00000586410 MIA2Q96PC5 1412 aa21.14■□□□□ 0.98
TCF3-209ENST00000586410 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.97
TCF3-209ENST00000586410 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
TCF3-209ENST00000586410 SPAG9O60271 1321 aaKnown RBP21.11■□□□□ 0.97
TCF3-209ENST00000586410 ARID4BQ4LE39 1312 aaPredicted RBP21.11■□□□□ 0.97
TCF3-209ENST00000586410 AGLP35573 1532 aa21.09■□□□□ 0.97
TCF3-209ENST00000586410 PLXNC1O60486 1568 aa21.09■□□□□ 0.97
TCF3-209ENST00000586410 PTPN23Q9H3S7 1636 aa21.07■□□□□ 0.96
TCF3-209ENST00000586410 FGD6Q6ZV73 1430 aa21.07■□□□□ 0.96
TCF3-209ENST00000586410 MYT1LQ9UL68 1186 aa21.07■□□□□ 0.96
TCF3-209ENST00000586410 RIMS1Q86UR5 1692 aaKnown RBP21.07■□□□□ 0.96
TCF3-209ENST00000586410 ADGBQ8N7X0 1667 aa21.06■□□□□ 0.96
TCF3-209ENST00000586410 RTEL1-TNFRSF6BF6WH68 1400 aa21.06■□□□□ 0.96
TCF3-209ENST00000586410 FER1L4A9Z1Z3 1794 aa21.06■□□□□ 0.96
TCF3-209ENST00000586410 PTPRMP28827 1452 aa21.06■□□□□ 0.96
TCF3-209ENST00000586410 TCOF1Q13428 1488 aaKnown RBP21.05■□□□□ 0.96
TCF3-209ENST00000586410 MAST1Q9Y2H9 1570 aa21.04■□□□□ 0.96
TCF3-209ENST00000586410 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
TCF3-209ENST00000586410 A2MP01023 1474 aa21.02■□□□□ 0.96
TCF3-209ENST00000586410 RSPH4AQ5TD94 716 aa21.01■□□□□ 0.95
TCF3-209ENST00000586410 MLECQ14165 292 aa21■□□□□ 0.95
TCF3-209ENST00000586410 DNMT1P26358 1616 aaKnown RBP20.99■□□□□ 0.95
TCF3-209ENST00000586410 ABCC5O15440 1437 aa20.96■□□□□ 0.95
TCF3-209ENST00000586410 SHANK2Q9UPX8 1470 aa20.95■□□□□ 0.94
TCF3-209ENST00000586410 DAPK1P53355 1430 aa20.94■□□□□ 0.94
TCF3-209ENST00000586410 DHX29Q7Z478 1369 aaKnown RBP20.93■□□□□ 0.94
TCF3-209ENST00000586410 TSPY4P0CV99 314 aa20.91■□□□□ 0.94
TCF3-209ENST00000586410 TSPY10P0CW01 314 aa20.91■□□□□ 0.94
TCF3-209ENST00000586410 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
TCF3-209ENST00000586410 C3P01024 1663 aa20.89■□□□□ 0.93
TCF3-209ENST00000586410 MROH2AA6NES4 1674 aa20.87■□□□□ 0.93
TCF3-209ENST00000586410 CLTCQ00610 1675 aaKnown RBP20.86■□□□□ 0.93
TCF3-209ENST00000586410 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
TCF3-209ENST00000586410 CNTLNQ9NXG0 1405 aa20.85■□□□□ 0.93
TCF3-209ENST00000586410 RNF17Q9BXT8 1623 aaKnown RBP20.85■□□□□ 0.93
TCF3-209ENST00000586410 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
TCF3-209ENST00000586410 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
TCF3-209ENST00000586410 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
TCF3-209ENST00000586410 FAM50AQ14320 339 aaKnown RBP20.82■□□□□ 0.92
TCF3-209ENST00000586410 KIF15Q9NS87 1388 aa20.82■□□□□ 0.92
TCF3-209ENST00000586410 LMTK3Q96Q04 1460 aa20.81■□□□□ 0.92
TCF3-209ENST00000586410 CEBPAP49715 358 aaPredicted RBP20.81■□□□□ 0.92
TCF3-209ENST00000586410 PTPRKQ15262 1439 aa20.8■□□□□ 0.92
TCF3-209ENST00000586410 KIF3BO15066 747 aa20.8■□□□□ 0.92
TCF3-209ENST00000586410 GGT6Q6P531 493 aa20.8■□□□□ 0.92
TCF3-209ENST00000586410 FAM135AQ9P2D6 1515 aa20.79■□□□□ 0.92
TCF3-209ENST00000586410 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms