RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 POTEB3A0JP26 581 aa9.41□□□□□ -0.9
VAPA-208ENST00000584796 POTEBQ6S5H4 581 aa9.41□□□□□ -0.9
VAPA-208ENST00000584796 RIMBP2O15034 1052 aa9.4□□□□□ -0.9
VAPA-208ENST00000584796 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
VAPA-208ENST00000584796 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
VAPA-208ENST00000584796 KIF3CO14782 793 aa9.39□□□□□ -0.91
VAPA-208ENST00000584796 ZSWIM6Q9HCJ5 1215 aa9.39□□□□□ -0.91
VAPA-208ENST00000584796 PPP1R37O75864 691 aa9.36□□□□□ -0.91
VAPA-208ENST00000584796 GPR153Q6NV75 609 aa9.35□□□□□ -0.91
VAPA-208ENST00000584796 DNAJC5Q9H3Z4 198 aa9.35□□□□□ -0.91
VAPA-208ENST00000584796 C2orf72A6NCS6 295 aa9.34□□□□□ -0.91
VAPA-208ENST00000584796 CHGAP10645 457 aaKnown RBP9.34□□□□□ -0.91
VAPA-208ENST00000584796 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
VAPA-208ENST00000584796 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
VAPA-208ENST00000584796 ERBB3P21860 1342 aa9.31□□□□□ -0.92
VAPA-208ENST00000584796 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
VAPA-208ENST00000584796 NKX1-1Q15270 411 aaPredicted RBP9.29□□□□□ -0.92
VAPA-208ENST00000584796 TMC2Q8TDI7 906 aa9.29□□□□□ -0.92
VAPA-208ENST00000584796 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
VAPA-208ENST00000584796 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
VAPA-208ENST00000584796 SLC34A2O95436 690 aa9.27□□□□□ -0.93
VAPA-208ENST00000584796 MMRN1Q13201 1228 aa9.27□□□□□ -0.93
VAPA-208ENST00000584796 KHSRPQ92945 711 aaKnown RBP eCLIP9.25□□□□□ -0.939e-8■■■□□ 18.4
VAPA-208ENST00000584796 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
VAPA-208ENST00000584796 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
VAPA-208ENST00000584796 ZNF316A6NFI3 1004 aaPredicted RBP9.21□□□□□ -0.94
VAPA-208ENST00000584796 FOXK1P85037 733 aa9.21□□□□□ -0.94
VAPA-208ENST00000584796 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
VAPA-208ENST00000584796 PCDHGA4Q9Y5G9 962 aa9.21□□□□□ -0.94
VAPA-208ENST00000584796 NUDT7P0C024 238 aa9.19□□□□□ -0.94
VAPA-208ENST00000584796 PTCD2Q8WV60 388 aaKnown RBP9.17□□□□□ -0.94
VAPA-208ENST00000584796 DSG2Q14126 1118 aa9.16□□□□□ -0.94
VAPA-208ENST00000584796 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
VAPA-208ENST00000584796 KDM4FA0A1W2PPD8 638 aa9.15□□□□□ -0.94
VAPA-208ENST00000584796 GTPBP6O43824 516 aaPredicted RBP9.15□□□□□ -0.94
VAPA-208ENST00000584796 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
VAPA-208ENST00000584796 LHX6Q9UPM6 363 aa9.14□□□□□ -0.95
VAPA-208ENST00000584796 DCAF8L2P0C7V8 631 aa9.1□□□□□ -0.95
VAPA-208ENST00000584796 NCKAP5LQ9HCH0 1330 aa9.09□□□□□ -0.95
VAPA-208ENST00000584796 PBX2P40425 430 aa9.09□□□□□ -0.95
VAPA-208ENST00000584796 PSDA5PKW4 1024 aaPredicted RBP9.08□□□□□ -0.96
VAPA-208ENST00000584796 POTEEQ6S8J3 1075 aa9.08□□□□□ -0.96
VAPA-208ENST00000584796 LSM11P83369 360 aaKnown RBP eCLIP9.07□□□□□ -0.96
VAPA-208ENST00000584796 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
VAPA-208ENST00000584796 TBC1D12O60347 775 aa9.06□□□□□ -0.96
VAPA-208ENST00000584796 PDE4AP27815 886 aa9.06□□□□□ -0.96
VAPA-208ENST00000584796 OXER1Q8TDS5 423 aa9.06□□□□□ -0.96
VAPA-208ENST00000584796 PTGER2P43116 358 aa9.05□□□□□ -0.96
VAPA-208ENST00000584796 ANKRD13DQ6ZTN6 518 aa9.04□□□□□ -0.96
VAPA-208ENST00000584796 RNF166Q96A37 237 aaPredicted RBP9.04□□□□□ -0.96
VAPA-208ENST00000584796 MYT1LQ9UL68 1186 aa9.04□□□□□ -0.96
VAPA-208ENST00000584796 MFSD10Q14728 455 aa9.02□□□□□ -0.97
VAPA-208ENST00000584796 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
VAPA-208ENST00000584796 ARHGAP33O14559 1287 aa9□□□□□ -0.97
VAPA-208ENST00000584796 UPF1Q92900 1129 aaKnown RBP eCLIP9□□□□□ -0.97
VAPA-208ENST00000584796 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
VAPA-208ENST00000584796 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
VAPA-208ENST00000584796 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
VAPA-208ENST00000584796 PPP4R3BQ5MIZ7 849 aa8.99□□□□□ -0.97
VAPA-208ENST00000584796 CADPS2Q86UW7 1296 aa8.98□□□□□ -0.97
VAPA-208ENST00000584796 BBXQ8WY36 941 aaPredicted RBP8.97□□□□□ -0.97
VAPA-208ENST00000584796 ADGRD1Q6QNK2 874 aa8.95□□□□□ -0.98
VAPA-208ENST00000584796 TK2O00142 265 aa8.94□□□□□ -0.98
VAPA-208ENST00000584796 PSEN2P49810 448 aa8.94□□□□□ -0.98
VAPA-208ENST00000584796 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
VAPA-208ENST00000584796 ANO8Q9HCE9 1232 aaPredicted RBP8.94□□□□□ -0.98
VAPA-208ENST00000584796 RTN4Q9NQC3 1192 aaKnown RBP8.93□□□□□ -0.98
VAPA-208ENST00000584796 FOSBP53539 338 aa8.92□□□□□ -0.98
VAPA-208ENST00000584796 ZNF454Q8N9F8 522 aa8.92□□□□□ -0.98
VAPA-208ENST00000584796 EMILIN3Q9NT22 766 aa8.92□□□□□ -0.98
VAPA-208ENST00000584796 HRO43593 1189 aa8.91□□□□□ -0.98
VAPA-208ENST00000584796 EVI5O60447 810 aa8.91□□□□□ -0.98
VAPA-208ENST00000584796 BCL2L12Q9HB09 334 aa8.91□□□□□ -0.98
VAPA-208ENST00000584796 JPH4Q96JJ6 628 aa8.9□□□□□ -0.98
VAPA-208ENST00000584796 KCNK17Q96T54 332 aa8.9□□□□□ -0.98
VAPA-208ENST00000584796 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
VAPA-208ENST00000584796 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
VAPA-208ENST00000584796 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
VAPA-208ENST00000584796 SPRYD3Q8NCJ5 442 aa8.85□□□□□ -0.99
VAPA-208ENST00000584796 ZDHHC16Q969W1 377 aa8.85□□□□□ -0.99
VAPA-208ENST00000584796 SLC4A5Q9BY07 1137 aa8.85□□□□□ -0.99
VAPA-208ENST00000584796 VPS9D1Q9Y2B5 631 aa8.85□□□□□ -0.99
VAPA-208ENST00000584796 PTPREP23469 700 aa8.84□□□□□ -0.99
VAPA-208ENST00000584796 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.84□□□□□ -0.99
VAPA-208ENST00000584796 ADAM33Q9BZ11 813 aa8.83□□□□□ -1
VAPA-208ENST00000584796 ZBED2Q9BTP6 218 aa8.81□□□□□ -1
VAPA-208ENST00000584796 HCSTQ9UBK5 93 aa8.81□□□□□ -1
VAPA-208ENST00000584796 PCDHGA10Q9Y5H3 936 aa8.81□□□□□ -1
VAPA-208ENST00000584796 DPYSL4O14531 572 aa8.79□□□□□ -1
VAPA-208ENST00000584796 PHF14O94880 888 aa8.79□□□□□ -1
VAPA-208ENST00000584796 BHMG1C9JSJ3 638 aaPredicted RBP8.78□□□□□ -1
VAPA-208ENST00000584796 FBXW7Q969H0 707 aa8.78□□□□□ -1
VAPA-208ENST00000584796 TYW1BQ6NUM6 668 aa8.77□□□□□ -1.01
VAPA-208ENST00000584796 PAXIP1Q6ZW49 1069 aaPredicted RBP8.77□□□□□ -1.01
VAPA-208ENST00000584796 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
VAPA-208ENST00000584796 PPP1R3GB7ZBB8 358 aa8.76□□□□□ -1.01
VAPA-208ENST00000584796 KCTD12Q96CX2 325 aaKnown RBP8.76□□□□□ -1.01
VAPA-208ENST00000584796 CFAP44Q96MT7 982 aa8.75□□□□□ -1.01
VAPA-208ENST00000584796 EPAS1Q99814 870 aa8.74□□□□□ -1.01
VAPA-208ENST00000584796 COL9A1P20849 921 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms