RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 RICTORQ6R327 1708 aa21.58■■□□□ 1.05
CDK5RAP3-234ENST00000584525 EFCAB2Q5VUJ9 269 aa21.57■■□□□ 1.04
CDK5RAP3-234ENST00000584525 CDK11AQ9UQ88 783 aaPredicted RBP21.57■■□□□ 1.04
CDK5RAP3-234ENST00000584525 ZMYM4Q5VZL5 1548 aa21.56■■□□□ 1.04
CDK5RAP3-234ENST00000584525 RIMS1Q86UR5 1692 aaKnown RBP21.56■■□□□ 1.04
CDK5RAP3-234ENST00000584525 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
CDK5RAP3-234ENST00000584525 HECW1Q76N89 1606 aa21.52■■□□□ 1.04
CDK5RAP3-234ENST00000584525 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
CDK5RAP3-234ENST00000584525 ATP10AO60312 1499 aa21.49■■□□□ 1.03
CDK5RAP3-234ENST00000584525 ARHGAP35Q9NRY4 1499 aa21.47■■□□□ 1.03
CDK5RAP3-234ENST00000584525 AFAP1Q8N556 730 aa21.47■■□□□ 1.03
CDK5RAP3-234ENST00000584525 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
CDK5RAP3-234ENST00000584525 CEBPAP49715 358 aaPredicted RBP21.45■■□□□ 1.02
CDK5RAP3-234ENST00000584525 SIGLEC1Q9BZZ2 1709 aa21.45■■□□□ 1.02
CDK5RAP3-234ENST00000584525 TROQ12816 1431 aaPredicted RBP21.44■■□□□ 1.02
CDK5RAP3-234ENST00000584525 CLIP1P30622 1438 aa21.42■■□□□ 1.02
CDK5RAP3-234ENST00000584525 CERKQ8TCT0 537 aa21.42■■□□□ 1.02
CDK5RAP3-234ENST00000584525 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
CDK5RAP3-234ENST00000584525 ZNF518AQ6AHZ1 1483 aa21.4■■□□□ 1.02
CDK5RAP3-234ENST00000584525 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.02
CDK5RAP3-234ENST00000584525 KIF14Q15058 1648 aa21.38■■□□□ 1.01
CDK5RAP3-234ENST00000584525 FER1L4A9Z1Z3 1794 aa21.36■■□□□ 1.01
CDK5RAP3-234ENST00000584525 MYO5CQ9NQX4 1742 aa21.35■■□□□ 1.01
CDK5RAP3-234ENST00000584525 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
CDK5RAP3-234ENST00000584525 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1.01
CDK5RAP3-234ENST00000584525 KDM5CP41229 1560 aa21.3■■□□□ 1
CDK5RAP3-234ENST00000584525 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
CDK5RAP3-234ENST00000584525 MLH3Q9UHC1 1453 aa21.28■■□□□ 1
CDK5RAP3-234ENST00000584525 TRAPPC8Q9Y2L5 1435 aa21.28■■□□□ 1
CDK5RAP3-234ENST00000584525 CASKIN1Q8WXD9 1431 aa21.27■■□□□ 1
CDK5RAP3-234ENST00000584525 DIP2CQ9Y2E4 1556 aa21.26■□□□□ 0.99
CDK5RAP3-234ENST00000584525 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
CDK5RAP3-234ENST00000584525 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
CDK5RAP3-234ENST00000584525 PREX1Q8TCU6 1659 aa21.24■□□□□ 0.99
CDK5RAP3-234ENST00000584525 ABCC1P33527 1531 aa21.21■□□□□ 0.99
CDK5RAP3-234ENST00000584525 REREQ9P2R6 1566 aa21.21■□□□□ 0.99
CDK5RAP3-234ENST00000584525 AGLP35573 1532 aa21.19■□□□□ 0.98
CDK5RAP3-234ENST00000584525 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
CDK5RAP3-234ENST00000584525 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
CDK5RAP3-234ENST00000584525 CDC42BPBQ9Y5S2 1711 aa21.18■□□□□ 0.98
CDK5RAP3-234ENST00000584525 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDK5RAP3-234ENST00000584525 SPAG9O60271 1321 aaKnown RBP21.17■□□□□ 0.98
CDK5RAP3-234ENST00000584525 PREX2Q70Z35 1606 aa21.17■□□□□ 0.98
CDK5RAP3-234ENST00000584525 CNTLNQ9NXG0 1405 aa21.15■□□□□ 0.98
CDK5RAP3-234ENST00000584525 PTPRTO14522 1441 aa21.14■□□□□ 0.98
CDK5RAP3-234ENST00000584525 FYCO1Q9BQS8 1478 aa21.13■□□□□ 0.97
CDK5RAP3-234ENST00000584525 CFDP1Q9UEE9 299 aaPredicted RBP21.13■□□□□ 0.97
CDK5RAP3-234ENST00000584525 STRCQ7RTU9 1775 aa21.13■□□□□ 0.97
CDK5RAP3-234ENST00000584525 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
CDK5RAP3-234ENST00000584525 ITSN2Q9NZM3 1697 aa21.11■□□□□ 0.97
CDK5RAP3-234ENST00000584525 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
CDK5RAP3-234ENST00000584525 C3P01024 1663 aa21.1■□□□□ 0.97
CDK5RAP3-234ENST00000584525 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
CDK5RAP3-234ENST00000584525 SAMD9LQ8IVG5 1584 aa21.09■□□□□ 0.97
CDK5RAP3-234ENST00000584525 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.97
CDK5RAP3-234ENST00000584525 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
CDK5RAP3-234ENST00000584525 SYCP2Q9BX26 1530 aa21.08■□□□□ 0.96
CDK5RAP3-234ENST00000584525 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
CDK5RAP3-234ENST00000584525 NCOA1Q15788 1441 aa21.07■□□□□ 0.96
CDK5RAP3-234ENST00000584525 KIAA1107Q9UPP5 1409 aa21.06■□□□□ 0.96
CDK5RAP3-234ENST00000584525 GGT6Q6P531 493 aa21.06■□□□□ 0.96
CDK5RAP3-234ENST00000584525 NPATQ14207 1427 aa21.05■□□□□ 0.96
CDK5RAP3-234ENST00000584525 CDC42BPAQ5VT25 1732 aa21.05■□□□□ 0.96
CDK5RAP3-234ENST00000584525 NCKAP5LQ9HCH0 1330 aa21.04■□□□□ 0.96
CDK5RAP3-234ENST00000584525 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
CDK5RAP3-234ENST00000584525 PLEKHH2Q8IVE3 1493 aa21.04■□□□□ 0.96
CDK5RAP3-234ENST00000584525 A2MP01023 1474 aa21.01■□□□□ 0.95
CDK5RAP3-234ENST00000584525 ILDR2Q71H61 639 aa21.01■□□□□ 0.95
CDK5RAP3-234ENST00000584525 ATP7AQ04656 1500 aa21■□□□□ 0.95
CDK5RAP3-234ENST00000584525 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
CDK5RAP3-234ENST00000584525 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
CDK5RAP3-234ENST00000584525 LTBP4Q8N2S1 1624 aa20.99■□□□□ 0.95
CDK5RAP3-234ENST00000584525 PKD2Q13563 968 aa20.97■□□□□ 0.95
CDK5RAP3-234ENST00000584525 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
CDK5RAP3-234ENST00000584525 ZNF335Q9H4Z2 1342 aaPredicted RBP20.96■□□□□ 0.95
CDK5RAP3-234ENST00000584525 PTPRKQ15262 1439 aa20.95■□□□□ 0.95
CDK5RAP3-234ENST00000584525 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
CDK5RAP3-234ENST00000584525 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
CDK5RAP3-234ENST00000584525 MROH2AA6NES4 1674 aa20.93■□□□□ 0.94
CDK5RAP3-234ENST00000584525 SOCS7O14512 581 aa20.93■□□□□ 0.94
CDK5RAP3-234ENST00000584525 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
CDK5RAP3-234ENST00000584525 UBAP1LF5GYI3 381 aa20.92■□□□□ 0.94
CDK5RAP3-234ENST00000584525 INO80Q9ULG1 1556 aaPredicted RBP20.92■□□□□ 0.94
CDK5RAP3-234ENST00000584525 CLTCQ00610 1675 aaKnown RBP20.9■□□□□ 0.94
CDK5RAP3-234ENST00000584525 PLA2R1Q13018 1463 aa20.89■□□□□ 0.94
CDK5RAP3-234ENST00000584525 MBD5Q9P267 1494 aa20.89■□□□□ 0.94
CDK5RAP3-234ENST00000584525 DHX29Q7Z478 1369 aaKnown RBP20.88■□□□□ 0.93
CDK5RAP3-234ENST00000584525 KIF3BO15066 747 aa20.87■□□□□ 0.93
CDK5RAP3-234ENST00000584525 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
CDK5RAP3-234ENST00000584525 CEP170BQ9Y4F5 1589 aaPredicted RBP20.86■□□□□ 0.93
CDK5RAP3-234ENST00000584525 TCOF1Q13428 1488 aaKnown RBP20.86■□□□□ 0.93
CDK5RAP3-234ENST00000584525 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
CDK5RAP3-234ENST00000584525 FBXO31Q5XUX0 539 aaPredicted RBP20.85■□□□□ 0.93
CDK5RAP3-234ENST00000584525 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
CDK5RAP3-234ENST00000584525 MYO3AQ8NEV4 1616 aa20.85■□□□□ 0.93
CDK5RAP3-234ENST00000584525 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
CDK5RAP3-234ENST00000584525 SPATA31D1Q6ZQQ2 1576 aa20.84■□□□□ 0.93
CDK5RAP3-234ENST00000584525 WASHC2CQ9Y4E1 1318 aa20.82■□□□□ 0.92
CDK5RAP3-234ENST00000584525 RSPH4AQ5TD94 716 aa20.82■□□□□ 0.92
CDK5RAP3-234ENST00000584525 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms