RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 ADAMTSL3P82987 1691 aa14.39□□□□□ -0.11
CRLF3-205ENST00000583805 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
CRLF3-205ENST00000583805 ARHGEF40Q8TER5 1519 aa14.38□□□□□ -0.11
CRLF3-205ENST00000583805 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
CRLF3-205ENST00000583805 LRRIQ1Q96JM4 1722 aa14.38□□□□□ -0.11
CRLF3-205ENST00000583805 HECW2Q9P2P5 1572 aa14.36□□□□□ -0.11
CRLF3-205ENST00000583805 PLEKHD1A6NEE1 506 aa14.36□□□□□ -0.11
CRLF3-205ENST00000583805 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
CRLF3-205ENST00000583805 CDK13Q14004 1512 aaKnown RBP14.35□□□□□ -0.11
CRLF3-205ENST00000583805 ZMYM4Q5VZL5 1548 aa14.35□□□□□ -0.11
CRLF3-205ENST00000583805 KIF14Q15058 1648 aa14.34□□□□□ -0.11
CRLF3-205ENST00000583805 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
CRLF3-205ENST00000583805 RANGAP1P46060 587 aaPredicted RBP14.34□□□□□ -0.11
CRLF3-205ENST00000583805 FANCAO15360 1455 aa14.33□□□□□ -0.12
CRLF3-205ENST00000583805 DENND4BO75064 1496 aaPredicted RBP14.32□□□□□ -0.12
CRLF3-205ENST00000583805 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
CRLF3-205ENST00000583805 AKNAQ7Z591 1439 aa14.31□□□□□ -0.12
CRLF3-205ENST00000583805 FKBP8Q14318 412 aa14.3□□□□□ -0.12
CRLF3-205ENST00000583805 MADDQ8WXG6 1647 aa14.3□□□□□ -0.12
CRLF3-205ENST00000583805 FER1L4A9Z1Z3 1794 aa14.28□□□□□ -0.12
CRLF3-205ENST00000583805 ZFYVE16Q7Z3T8 1539 aa14.28□□□□□ -0.12
CRLF3-205ENST00000583805 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
CRLF3-205ENST00000583805 RIMS1Q86UR5 1692 aaKnown RBP14.28□□□□□ -0.12
CRLF3-205ENST00000583805 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.12
CRLF3-205ENST00000583805 CCDC18Q5T9S5 1454 aa14.26□□□□□ -0.13
CRLF3-205ENST00000583805 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
CRLF3-205ENST00000583805 CDK11AQ9UQ88 783 aaPredicted RBP14.26□□□□□ -0.13
CRLF3-205ENST00000583805 PCF11O94913 1555 aaKnown RBP14.26□□□□□ -0.13
CRLF3-205ENST00000583805 PLCH2O75038 1416 aa14.25□□□□□ -0.13
CRLF3-205ENST00000583805 CLIP1P30622 1438 aa14.25□□□□□ -0.13
CRLF3-205ENST00000583805 PREX2Q70Z35 1606 aa14.25□□□□□ -0.13
CRLF3-205ENST00000583805 PTPRMP28827 1452 aa14.25□□□□□ -0.13
CRLF3-205ENST00000583805 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
CRLF3-205ENST00000583805 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
CRLF3-205ENST00000583805 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
CRLF3-205ENST00000583805 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
CRLF3-205ENST00000583805 ITSN2Q9NZM3 1697 aa14.21□□□□□ -0.13
CRLF3-205ENST00000583805 KDM5CP41229 1560 aa14.21□□□□□ -0.14
CRLF3-205ENST00000583805 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
CRLF3-205ENST00000583805 FYCO1Q9BQS8 1478 aa14.2□□□□□ -0.14
CRLF3-205ENST00000583805 CASKIN1Q8WXD9 1431 aa14.2□□□□□ -0.14
CRLF3-205ENST00000583805 ZNF518AQ6AHZ1 1483 aa14.19□□□□□ -0.14
CRLF3-205ENST00000583805 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
CRLF3-205ENST00000583805 SCAPERQ9BY12 1400 aa14.18□□□□□ -0.14
CRLF3-205ENST00000583805 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
CRLF3-205ENST00000583805 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
CRLF3-205ENST00000583805 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
CRLF3-205ENST00000583805 C9orf84Q5VXU9 1444 aa14.15□□□□□ -0.14
CRLF3-205ENST00000583805 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
CRLF3-205ENST00000583805 ABCC1P33527 1531 aa14.15□□□□□ -0.14
CRLF3-205ENST00000583805 PREX1Q8TCU6 1659 aa14.15□□□□□ -0.14
CRLF3-205ENST00000583805 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
CRLF3-205ENST00000583805 ATP10AO60312 1499 aa14.14□□□□□ -0.15
CRLF3-205ENST00000583805 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
CRLF3-205ENST00000583805 ABCA6Q8N139 1617 aa14.13□□□□□ -0.15
CRLF3-205ENST00000583805 DIP2CQ9Y2E4 1556 aa14.13□□□□□ -0.15
CRLF3-205ENST00000583805 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
CRLF3-205ENST00000583805 KIDINS220Q9ULH0 1771 aa14.11□□□□□ -0.15
CRLF3-205ENST00000583805 MLH3Q9UHC1 1453 aa14.1□□□□□ -0.15
CRLF3-205ENST00000583805 SAMD9LQ8IVG5 1584 aa14.08□□□□□ -0.16
CRLF3-205ENST00000583805 AGLP35573 1532 aa14.07□□□□□ -0.16
CRLF3-205ENST00000583805 C3P01024 1663 aa14.07□□□□□ -0.16
CRLF3-205ENST00000583805 MROH2AA6NES4 1674 aa14.06□□□□□ -0.16
CRLF3-205ENST00000583805 EHBP1L1Q8N3D4 1523 aa14.05□□□□□ -0.16
CRLF3-205ENST00000583805 PLEKHH2Q8IVE3 1493 aa14.04□□□□□ -0.16
CRLF3-205ENST00000583805 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
CRLF3-205ENST00000583805 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
CRLF3-205ENST00000583805 SYCP2Q9BX26 1530 aa14.03□□□□□ -0.16
CRLF3-205ENST00000583805 INO80Q9ULG1 1556 aaPredicted RBP14.03□□□□□ -0.16
CRLF3-205ENST00000583805 SUPT6HQ7KZ85 1726 aaKnown RBP14.02□□□□□ -0.16
CRLF3-205ENST00000583805 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
CRLF3-205ENST00000583805 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
CRLF3-205ENST00000583805 MLECQ14165 292 aa14□□□□□ -0.17
CRLF3-205ENST00000583805 AFAP1Q8N556 730 aa14□□□□□ -0.17
CRLF3-205ENST00000583805 TIAM1Q13009 1591 aa14□□□□□ -0.17
CRLF3-205ENST00000583805 ATP7AQ04656 1500 aa14□□□□□ -0.17
CRLF3-205ENST00000583805 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
CRLF3-205ENST00000583805 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
CRLF3-205ENST00000583805 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
CRLF3-205ENST00000583805 STRCQ7RTU9 1775 aa13.98□□□□□ -0.17
CRLF3-205ENST00000583805 MTUS2Q5JR59 1369 aa13.97□□□□□ -0.17
CRLF3-205ENST00000583805 CNTLNQ9NXG0 1405 aa13.97□□□□□ -0.17
CRLF3-205ENST00000583805 CEP162Q5TB80 1403 aa13.96□□□□□ -0.18
CRLF3-205ENST00000583805 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.18
CRLF3-205ENST00000583805 CLTCQ00610 1675 aaKnown RBP13.95□□□□□ -0.18
CRLF3-205ENST00000583805 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
CRLF3-205ENST00000583805 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
CRLF3-205ENST00000583805 FBXO41Q8TF61 875 aa13.92□□□□□ -0.18
CRLF3-205ENST00000583805 ESF1Q9H501 851 aaKnown RBP13.92□□□□□ -0.18
CRLF3-205ENST00000583805 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
CRLF3-205ENST00000583805 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
CRLF3-205ENST00000583805 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
CRLF3-205ENST00000583805 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
CRLF3-205ENST00000583805 A2MP01023 1474 aa13.9□□□□□ -0.18
CRLF3-205ENST00000583805 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.19
CRLF3-205ENST00000583805 HSPA2P54652 639 aa13.89□□□□□ -0.19
CRLF3-205ENST00000583805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
CRLF3-205ENST00000583805 FAM135AQ9P2D6 1515 aa13.89□□□□□ -0.19
CRLF3-205ENST00000583805 NPATQ14207 1427 aa13.89□□□□□ -0.19
CRLF3-205ENST00000583805 RTEL1-TNFRSF6BF6WH68 1400 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms