RNA–Protein interactions for RNA: ENST00000583524.5

PHF12-212, Transcript of PHD finger protein 12, humanhuman

TSL 1 (best)

Gene PHF12, Length 1,875 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-212ENST00000583524 MAPKBP1O60336 1514 aa40.42■■■■■ 4.06
PHF12-212ENST00000583524 KDM5BQ9UGL1 1544 aa40.42■■■■■ 4.06
PHF12-212ENST00000583524 ZNF644Q9H582 1327 aaPredicted RBP40.39■■■■■ 4.06
PHF12-212ENST00000583524 ZCCHC11Q5TAX3 1644 aaKnown RBP40.35■■■■■ 4.05
PHF12-212ENST00000583524 ACIN1Q9UKV3 1341 aaKnown RBP40.33■■■■■ 4.05
PHF12-212ENST00000583524 CHIC2Q9UKJ5 165 aa40.32■■■■■ 4.05
PHF12-212ENST00000583524 RRP7BPQ9NSQ0 103 aa40.28■■■■■ 4.04
PHF12-212ENST00000583524 PREX2Q70Z35 1606 aa40.27■■■■■ 4.04
PHF12-212ENST00000583524 CROCC2H7BZ55 1655 aa40.24■■■■■ 4.03
PHF12-212ENST00000583524 ZNF777Q9ULD5 760 aaPredicted RBP40.24■■■■■ 4.03
PHF12-212ENST00000583524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.22■■■■■ 4.03
PHF12-212ENST00000583524 ADGBQ8N7X0 1667 aa40.2■■■■■ 4.03
PHF12-212ENST00000583524 ADGRL2O95490 1459 aa40.2■■■■■ 4.03
PHF12-212ENST00000583524 CDC42BPBQ9Y5S2 1711 aa40.18■■■■■ 4.02
PHF12-212ENST00000583524 SHANK2Q9UPX8 1470 aa40.18■■■■■ 4.02
PHF12-212ENST00000583524 TTC37Q6PGP7 1564 aa40.18■■■■■ 4.02
PHF12-212ENST00000583524 ARHGEF5Q12774 1597 aa40.16■■■■■ 4.02
PHF12-212ENST00000583524 NCOA1Q15788 1441 aa40.12■■■■■ 4.01
PHF12-212ENST00000583524 MYO5CQ9NQX4 1742 aa40.11■■■■■ 4.01
PHF12-212ENST00000583524 KDM6BO15054 1643 aa40.1■■■■■ 4.01
PHF12-212ENST00000583524 TIMELESSQ9UNS1 1208 aa40.09■■■■■ 4.01
PHF12-212ENST00000583524 SAMD9LQ8IVG5 1584 aa40.09■■■■■ 4.01
PHF12-212ENST00000583524 RSPH4AQ5TD94 716 aa40.07■■■■■ 4.01
PHF12-212ENST00000583524 ANKRD30AQ9BXX3 1397 aa40.07■■■■■ 4.01
PHF12-212ENST00000583524 ARHGAP5Q13017 1502 aa40.05■■■■■ 4
PHF12-212ENST00000583524 MBD5Q9P267 1494 aa40.05■■■■■ 4
PHF12-212ENST00000583524 PLEKHH2Q8IVE3 1493 aa40.03■■■■■ 4
PHF12-212ENST00000583524 KCNH8Q96L42 1107 aa40.02■■■■■ 4
PHF12-212ENST00000583524 WDR7Q9Y4E6 1490 aa40.01■■■■■ 4
PHF12-212ENST00000583524 ZNF316A6NFI3 1004 aaPredicted RBP40.01■■■■■ 4
PHF12-212ENST00000583524 PLCH2O75038 1416 aa40.01■■■■■ 4
PHF12-212ENST00000583524 C9orf84Q5VXU9 1444 aa40.01■■■■■ 4
PHF12-212ENST00000583524 CCDC141Q6ZP82 1450 aa39.99■■■■□ 3.99
PHF12-212ENST00000583524 TSPY4P0CV99 314 aa39.98■■■■□ 3.99
PHF12-212ENST00000583524 TSPY10P0CW01 314 aa39.98■■■■□ 3.99
PHF12-212ENST00000583524 KIAA1107Q9UPP5 1409 aa39.98■■■■□ 3.99
PHF12-212ENST00000583524 TRIM52Q96A61 297 aa39.96■■■■□ 3.99
PHF12-212ENST00000583524 ARAP3Q8WWN8 1544 aa39.96■■■■□ 3.99
PHF12-212ENST00000583524 HNRNPMP52272 730 aaKnown RBP eCLIP39.93■■■■□ 3.989e-7■■■■□ 25
PHF12-212ENST00000583524 SIN3AQ96ST3 1273 aa39.93■■■■□ 3.98
PHF12-212ENST00000583524 SYCP2Q9BX26 1530 aa39.89■■■■□ 3.98
PHF12-212ENST00000583524 MAST1Q9Y2H9 1570 aa39.88■■■■□ 3.97
PHF12-212ENST00000583524 EFCAB2Q5VUJ9 269 aa39.88■■■■□ 3.97
PHF12-212ENST00000583524 DENND4BO75064 1496 aaPredicted RBP39.87■■■■□ 3.97
PHF12-212ENST00000583524 MPHOSPH9Q99550 1183 aa39.87■■■■□ 3.97
PHF12-212ENST00000583524 NEUROD1Q13562 356 aa39.86■■■■□ 3.97
PHF12-212ENST00000583524 ANKRD50Q9ULJ7 1429 aa39.85■■■■□ 3.97
PHF12-212ENST00000583524 ASXL2Q76L83 1435 aa39.84■■■■□ 3.97
PHF12-212ENST00000583524 ABCA9Q8IUA7 1624 aa39.82■■■■□ 3.97
PHF12-212ENST00000583524 NPM1P06748 294 aaKnown RBP eCLIP39.82■■■■□ 3.97
PHF12-212ENST00000583524 KIF15Q9NS87 1388 aa39.77■■■■□ 3.96
PHF12-212ENST00000583524 ABCC1P33527 1531 aa39.76■■■■□ 3.96
PHF12-212ENST00000583524 TONSLQ96HA7 1378 aa39.72■■■■□ 3.95
PHF12-212ENST00000583524 ARHGEF12Q9NZN5 1544 aa39.71■■■■□ 3.95
PHF12-212ENST00000583524 PZPP20742 1482 aa39.71■■■■□ 3.95
PHF12-212ENST00000583524 PLXNC1O60486 1568 aa39.7■■■■□ 3.95
PHF12-212ENST00000583524 DIEXFQ68CQ4 756 aaKnown RBP39.68■■■■□ 3.94
PHF12-212ENST00000583524 SLC4A1APQ9BWU0 796 aaKnown RBP39.68■■■■□ 3.94
PHF12-212ENST00000583524 PPP1R15AO75807 674 aaPredicted RBP39.66■■■■□ 3.94
PHF12-212ENST00000583524 KDM5DQ9BY66 1539 aa39.65■■■■□ 3.94
PHF12-212ENST00000583524 ANKRD30BQ9BXX2 1392 aa39.63■■■■□ 3.93
PHF12-212ENST00000583524 FANCAO15360 1455 aa39.61■■■■□ 3.93
PHF12-212ENST00000583524 TRAPPC8Q9Y2L5 1435 aa39.55■■■■□ 3.92
PHF12-212ENST00000583524 RTEL1-TNFRSF6BF6WH68 1400 aa39.54■■■■□ 3.92
PHF12-212ENST00000583524 DUOX2Q9NRD8 1548 aa39.54■■■■□ 3.92
PHF12-212ENST00000583524 NUP155O75694 1391 aa39.52■■■■□ 3.92
PHF12-212ENST00000583524 RPRD2Q5VT52 1461 aaKnown RBP39.5■■■■□ 3.91
PHF12-212ENST00000583524 FOXD1Q16676 465 aa39.49■■■■□ 3.91
PHF12-212ENST00000583524 RIMBP3CA6NJZ7 1639 aa39.49■■■■□ 3.91
PHF12-212ENST00000583524 RIMBP3BA6NNM3 1639 aa39.49■■■■□ 3.91
PHF12-212ENST00000583524 RIMBP3Q9UFD9 1639 aa39.49■■■■□ 3.91
PHF12-212ENST00000583524 ERBINQ96RT1 1412 aa39.47■■■■□ 3.91
PHF12-212ENST00000583524 UNC13BO14795 1591 aa39.45■■■■□ 3.91
PHF12-212ENST00000583524 ADGRL1O94910 1474 aa39.44■■■■□ 3.9
PHF12-212ENST00000583524 CFAP74Q9C0B2 1584 aa39.43■■■■□ 3.9
PHF12-212ENST00000583524 SPAG9O60271 1321 aaKnown RBP39.43■■■■□ 3.9
PHF12-212ENST00000583524 PKD2Q13563 968 aa39.43■■■■□ 3.9
PHF12-212ENST00000583524 ZFYVE16Q7Z3T8 1539 aa39.41■■■■□ 3.9
PHF12-212ENST00000583524 CD109Q6YHK3 1445 aa39.41■■■■□ 3.9
PHF12-212ENST00000583524 SCAPERQ9BY12 1400 aa39.38■■■■□ 3.9
PHF12-212ENST00000583524 FAM135AQ9P2D6 1515 aa39.36■■■■□ 3.89
PHF12-212ENST00000583524 AFAP1Q8N556 730 aa39.36■■■■□ 3.89
PHF12-212ENST00000583524 CYB5RLQ6IPT4 315 aa39.35■■■■□ 3.89
PHF12-212ENST00000583524 INO80Q9ULG1 1556 aaPredicted RBP39.35■■■■□ 3.89
PHF12-212ENST00000583524 MAGI2Q86UL8 1455 aa39.33■■■■□ 3.89
PHF12-212ENST00000583524 ATP7AQ04656 1500 aa39.31■■■■□ 3.88
PHF12-212ENST00000583524 TEX14Q8IWB6 1497 aa39.29■■■■□ 3.88
PHF12-212ENST00000583524 IQGAP3Q86VI3 1631 aa39.29■■■■□ 3.88
PHF12-212ENST00000583524 L3MBTL2Q969R5 705 aa39.27■■■■□ 3.88
PHF12-212ENST00000583524 ZNF518AQ6AHZ1 1483 aa39.25■■■■□ 3.87
PHF12-212ENST00000583524 NEO1Q92859 1461 aa39.23■■■■□ 3.87
PHF12-212ENST00000583524 GLI2P10070 1586 aa39.22■■■■□ 3.87
PHF12-212ENST00000583524 POGZQ7Z3K3 1410 aa39.16■■■■□ 3.86
PHF12-212ENST00000583524 MAP3K4Q9Y6R4 1608 aa39.16■■■■□ 3.86
PHF12-212ENST00000583524 KDM5CP41229 1560 aa39.14■■■■□ 3.86
PHF12-212ENST00000583524 EIF2AK4Q9P2K8 1649 aaKnown RBP39.12■■■■□ 3.85
PHF12-212ENST00000583524 DEPDC5O75140 1603 aa39.12■■■■□ 3.85
PHF12-212ENST00000583524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.11■■■■□ 3.851e-6■■■□□ 16.9
PHF12-212ENST00000583524 DHX29Q7Z478 1369 aaKnown RBP39.11■■■■□ 3.85
PHF12-212ENST00000583524 KIDINS220Q9ULH0 1771 aa39.11■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms